These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2757#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 584 fasta sequence [CGTGATCTCTCAAGAGGATCCTAATTGGTGGCAAGCGTATCGGGAGGGTGAAGAGGATCAAACACTGGCTGGTTTGATACCAAGCAAAGCCTTCCAGCATCAGCGAGAATCGATGAAGCAAACTATCGCCGGTGATAAATCGACCGTGCGCGGTTCCAAGAAATCTAGCACGTTGTTGTGCGCTAGAAAGAATCCAAAGAAGAAGAAACGGAACAAGTTTGGGGCGAACTACAACGACGACGGGTATCCGCATTACGCAACGACTGCCATCGACGATTACGACAGCGAGGAGGTACTTACTTACGAGGAAGTGGCGTTGTACTATCCTAGAGCGAATCACAAAAGACCGATAGTGCTGATAGGGCCACCAAATATCGGGCGACACGAGCTGAGACAGAGGCTGATGCACGACAGCGAGCGTTTCGCTGCTGCTATTCCTCGTAAGCTCTCCACTAGTATTCGTATCGTTTGTCAATTCAATCCTCTACTCGATCTTGGAATCTACGAGTAAAAATTATCTAAAATCTATTCCAGACACGAGTCGTCCAAGAAAGGACTCGGAAGTGGACGGACAGGATTACCAT] [+] EMBL BI506998 [CGTGATCTCTCAAGAGGATCCTAATTGGTGGCAAGCGTATCGGGAGGGTGAAGAGGATCAAACACTGGCTGGTTTGATACCAAGCAAAGCCTTCCAGCATCAGCGAGAATCGATGAAGCAAACTATCGCCGGTGATAAATCGACCGTGCGCGGTTCCAAGAAATCTAGCACGTTGTTGTGCGCTAGAAAGAATCCAAAGAAGAAGAAACGGAACAAGTTTGGGGCGAACTACAACGACGACGGGTATCCGCATTACGCAACGACTGCCATCGACGATTACGACAGCGAGGAGGTACTTACTTACGAGGAAGTGGCGTTGTACTATCCTAGAGCGAATCACAAAAGACCGATAGTGCTGATAGGGCCACCAAATATCGGGCGACACGAGCTGAGACAGAGGCTGATGCACGACAGCGAGCGTTTCGCTGCTGCTATTCCTCGTAAGCTCTCCACTAGTATTCGTATCGTTTGTCAATTCAATCCTCTACTCGATCTTGGAATCTACGAGTAAAAATTATCTAAAATCTATTCCAGACACGAGTCGTCCAAGAAAGGACTCGGAAGTGGACGGACAGGATTACCAT] consensusID : consensus_2757#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 477 fasta sequence [GCAACGACTGCCATCGACGATTACGACAGCGAGGAGGTACTTACTTACGAGGAAGTGGCGTTGTACTATCCTAGAGCGAATCACAAAAGACCGATAGTGCTGATAGGGCCACCAAATATCGGGCGACACGAGCTGAGACAGAGGCTGATGCACGACAGCGAGCGTTTCGCTGCTGCTATTCCTCACACGAGTCGTCCAAGAAAGGACTCGGAAGTGGACGGACAGGATTACCATTTCATCTCTCGTTCTCAATTCGAATCCGATATACTTTGTCGAAAGTTCGTCGAGCACGGAGAATACGAGAAAGCCTATTACGGCACCTCCGTCGAAGCTATACGATCCGTAGTAAACTCTGGTAAAATTTGTGTTCTTAATCTGCATCCGCAGAGCTTGAAGATATTGAGAAATTCGGACTTGAAACCGTACGTGGTATTCGTCGCCCCGCCAAGTTTGGAGAAACTTCGCCAGAAGAGGATC] [+] EMBL BI502718 [GCAACGACTGCCATCGACGATTACGACAGCGAGGAGGTACTTACTTACGAGGAAGTGGCGTTGTACTATCCTAGAGCGAATCACAAAAGACCGATAGTGCTGATAGGGCCACCAAATATCGGGCGACACGAGCTGAGACAGAGGCTGATGCACGACAGCGAGCGTTTCGCTGCTGCTATTCCTCACACGAGTCGTCCAAGAAAGGACTCGGAAGTGGACGGACAGGATTACCATTTCATCTCTCGTTCTCAATTCGAATCCGATATACTTTGTCGAAAGTTCGTCGAGCACGGAGAATACGAGAAAGCCTATTACGGCACCTCCGTCGAAGCTATACGATCCGTAGTAAACTCTGGTAAAATTTGTGTTCTTAATCTGCATCCGCAGAGCTTGAAGATATTGAGAAATTCGGACTTGAAACCGTACGTGGTATTCGTCGCCCCGCCAAGTTTGGAGAAACTTCGCCAGAAGAGGATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2757#0 CGTGATCTCTCAAGAGGATCCTAATTGGTGGCAAGCGTATCGGGAGGGTGAAGAGGATCA 60 consensus_2757#1 ------------------------------------------------------------ consensus_2757#0 AACACTGGCTGGTTTGATACCAAGCAAAGCCTTCCAGCATCAGCGAGAATCGATGAAGCA 120 consensus_2757#1 ------------------------------------------------------------ consensus_2757#0 AACTATCGCCGGTGATAAATCGACCGTGCGCGGTTCCAAGAAATCTAGCACGTTGTTGTG 180 consensus_2757#1 ------------------------------------------------------------ consensus_2757#0 CGCTAGAAAGAATCCAAAGAAGAAGAAACGGAACAAGTTTGGGGCGAACTACAACGACGA 240 consensus_2757#1 ------------------------------------------------------------ consensus_2757#0 CGGGTATCCGCATTACGCAACGACTGCCATCGACGATTACGACAGCGAGGAGGTACTTAC 300 consensus_2757#1 ----------------GCAACGACTGCCATCGACGATTACGACAGCGAGGAGGTACTTAC 44 ******************************************** consensus_2757#0 TTACGAGGAAGTGGCGTTGTACTATCCTAGAGCGAATCACAAAAGACCGATAGTGCTGAT 360 consensus_2757#1 TTACGAGGAAGTGGCGTTGTACTATCCTAGAGCGAATCACAAAAGACCGATAGTGCTGAT 104 ************************************************************ consensus_2757#0 AGGGCCACCAAATATCGGGCGACACGAGCTGAGACAGAGGCTGATGCACGACAGCGAGCG 420 consensus_2757#1 AGGGCCACCAAATATCGGGCGACACGAGCTGAGACAGAGGCTGATGCACGACAGCGAGCG 164 ************************************************************ consensus_2757#0 TTTCGCTGCTGCTATTCCTCGTA--AGCTCTCCACTA--GTATTCGTA--TCGTTTGTCA 474 consensus_2757#1 TTTCGCTGCTGCTATTCCTCACACGAGTCGTCCAAGAAAGGACTCGGAAGTGGACGGACA 224 ******************** * ** **** * * * *** * * * * ** consensus_2757#0 --ATT--CAATCCTCTACTCGATCTTGGAATCTA-CGAGTAAAAATTATCTAAAATCTAT 529 consensus_2757#1 GGATTACCATTTCATCTCTCGTTCTCAATTCGAATCCGATATACTTTGTCGAAAGTTCGT 284 *** ** * * **** *** * * ** * ** ** *** * * consensus_2757#0 TCCAGACACGAGTCGTCCAAGAAAGG--ACTCGGAAGTGGACGGACAGGAT-TACCAT-- 584 consensus_2757#1 --CGAGCACGGAGAATACGAGAAAGCCTATTACGGCACCTCCGTCGAAGCTATACGATCC 342 * **** * * ****** * * * ** * * * *** ** consensus_2757#0 ------------------------------------------------------------ consensus_2757#1 GTAGTAAACTCTGGTAAAATTTGTGTTCTTAATCTGCATCCGCAGAGCTTGAAGATATTG 402 consensus_2757#0 ------------------------------------------------------------ consensus_2757#1 AGAAATTCGGACTTGAAACCGTACGTGGTATTCGTCGCCCCGCCAAGTTTGGAGAAACTT 462 consensus_2757#0 --------------- consensus_2757#1 CGCCAGAAGAGGATC 477 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |