These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2763#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 416 fasta sequence [CGGACATTTGGTTCACGCACTCGGTCGAGCGGCCGGTGGTGCGAAGCTACCATCCGTGGGATTATGCCTGAACGCCTCTAAGGCCGTATCCTTTCTAGTCAAAGATGGCAACGATATCTCTAGGAGTCTCGTGTGGGTCGAAAGGCTCAAAACAATGTGACACTACTAGGTGGCCGGCCCTCGTGACCGGTCATCGCACGGGCCCCAGTTTGCCGTACGGGCGTCTTTGGATTCGTCGTCGGGATCTCGCCGATCGACGGCCACGGCGCTCTAACGGTCGATCATGGGTACTCCAACTTCGACGTCGAGACTCGGAATCGTCTGTAGACGACTTAGGTACCTGGCGGGGTGTTGTACTCGGTAGAGCAGTTACCACGCTGCGATCTGTTGAGACTCAGCCCTATGCTTGGGGATTC] [+] EMBL BI517063 [CGGACATTTGGTTCACGCACTCGGTCGAGCGGCCGGTGGTGCGAAGCTACCATCCGTGGGATTATGCCTGAACGCCTCTAAGGCCGTATCCTTTCTAGTCAAAGATGGCAACGATATCTCTAGGAGTCTCGTGTGGGTCGAAAGGCTCAAAACAATGTGACACTACTAGGTGGCCGGCCCTCGTGACCGGTCATCGCACGGGCCCCAGTTTGCCGTACGGGCGTCTTTGGATTCGTCGTCGGGATCTCGCCGATCGACGGCCACGGCGCTCTAACGGTCGATCATGGGTACTCCAACTTCGACGTCGAGACTCGGAATCGTCTGTAGACGACTTAGGTACCTGGCGGGGTGTTGTACTCGGTAGAGCAGTTACCACGCTGCGATCTGTTGAGACTCAGCCCTATGCTTGGGGATTC] consensusID : consensus_2763#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 133 fasta sequence [CGAGACTCCTAGAGATATCGTTGCCATCTTTGACGTAGAAAGGATACGGCTTAGTGGGTACCGAGCTCGAATTCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACA] [+] EMBL BG149168 [CGAGACTCCTAGAGATATCGTTGCCATCTTTGACGTAGAAAGGATACGGCTTAGTGGGTACCGAGCTCGAATTCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2763#0 CGGACATTTGGTTCACGCACTCGGTCGAGCGGCCGGTGGTGCGAAGCTACCATCCGTGGG 60 consensus_2763#1 ------------------------------------------------------------ consensus_2763#0 ATTATGCCTGAACGCCTCTAAGGCCGTATCCTTTCTAGTCAAAGATGGCAACGATATCTC 120 consensus_2763#1 ---------------------------------------------------CGAGACTCC 9 *** * * consensus_2763#0 TAGGAGTCTCGTGTGGGTCGAAAGGCTCAAAACAATGTGACACTACTAGGTGGCCGGCCC 180 consensus_2763#1 TAGAGATATCGTTGCCATCTTTGACGTAGAAAGGATACGGC-TTAGTGGGTACCGAGCTC 68 *** * **** ** * *** ** * * ** * *** * ** * consensus_2763#0 TCGTGACCGGTCATCGCACGGGCCCCAGTTTGCCGTACGGGCGTCTTTGGATTCGTCGTC 240 consensus_2763#1 GAATTCGTAATCATGGTCATAGCT---GTTTCCTGTGTGAAATTGTT---ATCCGC--TC 120 * **** * ** **** * ** * * ** ** ** ** consensus_2763#0 GGGATCTCGCCGATCGACGGCCACGGCGCTCTAACGGTCGATCATGGGTACTCCAACTTC 300 consensus_2763#1 ACAATTCCACACA----------------------------------------------- 133 ** * * * consensus_2763#0 GACGTCGAGACTCGGAATCGTCTGTAGACGACTTAGGTACCTGGCGGGGTGTTGTACTCG 360 consensus_2763#1 ------------------------------------------------------------ consensus_2763#0 GTAGAGCAGTTACCACGCTGCGATCTGTTGAGACTCAGCCCTATGCTTGGGGATTC 416 consensus_2763#1 -------------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |