These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2831#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 503 fasta sequence [TTAAATAAAAATTACTTTTGAATCATTGAATTTTAATAATTATGATCGCTATTTTCGAATTTTATACATTAAAAATGATTTACATATTGAATTTATGAAATGCATAAAAAAAGGATAAAAAATTTTAATATTCTTTTTTGAAATTTTACTTTAATTTTTTATGAAGAGATGTGATAAAGGTTATAAGAATTATTATTATTTAAATATAAAAAATAATAATTAATATAAATTGATAATTGATATAAATTTTATATATTTTTAAAGAATTCATATAATAAACAGTGAAGAAACAGTATAACAACGTTCAACATTTTGTATTATTTGAATTTTTTCCAAAGATTTTCCCAAGTGTTACTTTTTCAATAATATGATGTATTAACAATTAAATGAAAAATAATATAATTTGAAACAATAATCATGTCAGAAGTAAATAGAAAACAAGATATAAAGAAAAGAAAAGAAATGTTATATGAAACATTATTCTTGACTGGAATAGCAGGAAT] [+] EMBL BE844619 [TTAAATAAAAATTACTTTTGAATCATTGAATTTTAATAATTATGATCGCTATTTTCGAATTTTATACATTAAAAATGATTTACATATTGAATTTATGAAATGCATAAAAAAAGGATAAAAAATTTTAATATTCTTTTTTGAAATTTTACTTTAATTTTTTATGAAGAGATGTGATAAAGGTTATAAGAATTATTATTATTTAAATATAAAAAATAATAATTAATATAAATTGATAATTGATATAAATTTTATATATTTTTAAAGAATTCATATAATAAACAGTGAAGAAACAGTATAACAACGTTCAACATTTTGTATTATTTGAATTTTTTCCAAAGATTTTCCCAAGTGTTACTTTTTCAATAATATGATGTATTAACAATTAAATGAAAAATAATATAATTTGAAACAATAATCATGTCAGAAGTAAATAGAAAACAAGATATAAAGAAAAGAAAAGAAATGTTATATGAAACATTATTCTTGACTGGAATAGCAGGAAT] consensusID : consensus_2831#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 494 fasta sequence [TTAGATATGCGAAGATGAACAAAACAATTATATTCTTTCTTATTTATATATATATAAAATATAAATAAAATTATTTTTCTTTACCCCACTCTTCTGAAACATATTTTAATAAATCTGTAAGATTTTCAAATTCAGTTCTACTTTGAGGAGGATCATTTTTTGGTATTTTTGGTAAAATATTTCCAGCTTTTAATCGAAACTCTTTAGCATTAGTAGCTCCAGATAATTTCCAAATTCCATAAAAAAGTATACTACAACCACTAATTGCCCATGCAGAACCCCATAATAGAGCTCTTGTAGCAAGTGCTGCACCAGATTCTTGAAGACCTTTTCCTCCCATAAATCCAATATCAAAATGTTTATTATCCTTTTTCTTGACTGATGCTAAAGCATTAAAAAAACCGATCATAGCAGAAATTCCTGCTATTCCAGTCAAGAATAATGTTTCATATAACATTTCTTTTCTTTTCTTTATATCTTGTTTTCTATTTACT] [+] EMBL BI511026 [TTAGATATGCGAAGATGAACAAAACAATTATATTCTTTCTTATTTATATATATATAAAATATAAATAAAATTATTTTTCTTTACCCCACTCTTCTGAAACATATTTTAATAAATCTGTAAGATTTTCAAATTCAGTTCTACTTTGAGGAGGATCATTTTTTGGTATTTTTGGTAAAATATTTCCAGCTTTTAATCGAAACTCTTTAGCATTAGTAGCTCCAGATAATTTCCAAATTCCATAAAAAAGTATACTACAACCACTAATTGCCCATGCAGAACCCCATAATAGAGCTCTTGTAGCAAGTGCTGCACCAGATTCTTGAAGACCTTTTCCTCCCATAAATCCAATATCAAAATGTTTATTATCCTTTTTCTTGACTGATGCTAAAGCATTAAAAAAACCGATCATAGCAGAAATTCCTGCTATTCCAGTCAAGAATAATGTTTCATATAACATTTCTTTTCTTTTCTTTATATCTTGTTTTCTATTTACT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2831#0 TTAAATAAAAATTACTTTTGAATCATTGAATTTTAATAATTATGATCGCTATTTTCGAAT 60 consensus_2831#1 TTAGATATGCGAAGAT---GAACAAAACAATTATATTCTTTCTTATTTATATATATATAA 57 *** *** * *** * **** ** * ** * ** *** * * consensus_2831#0 TTTATACATTAAA--AATGATTTACATATTGAATTTATGAAATGCATAAAAA-AAGGATA 117 consensus_2831#1 AATATAAATAAAATTATTTTTCTTTACCCCACTCTTCTGAAACATATTTTAATAAATCTG 117 **** ** *** * * * * * ** ***** ** ** ** * consensus_2831#0 AAAAATTTTAATATTCTTTTTTGAAATTTTACTTTAATTTTTTATGAAGAGATGTGATAA 177 consensus_2831#1 TAAGATTTTCAAATTCAGTTCT--ACTTTGAGGAGGATCATTTTTTGGTATTTTTGGTAA 175 ** ***** * **** ** * * *** * ** *** * * * ** *** consensus_2831#0 AGGTTATAAGAATTATTATTATTTAAATATAAAAAATAATAATTAATATAAATTGATAAT 237 consensus_2831#1 AAT--------ATTTCCAGCTTTTAATCGAAACTCTTTAGCATTAGTAGCTCCAGATAAT 227 * *** * ***** ** * * **** ** ****** consensus_2831#0 TGATATAAATTTTATATATTTTTAAAGAATTCATA-TAATAAACAGTGAAGAAACAGTAT 296 consensus_2831#1 T--TCCAAATTCCATAAAAAAGTATACTACAACCACTAATTGCCCATGCAGAA-CCCCAT 284 * * ***** *** * ** * * * **** * ** **** * ** consensus_2831#0 AACAACGTTCA-ACATTTTGTATTATTTGAATTTTTTCCAAAGATTTTCCCAAGTGTTAC 355 consensus_2831#1 AATAGAGCTCTTGTAGCAAGTGCTGCACCAGATTCTTGAAGACCTTTTCC----TCCCAT 340 ** * * ** * ** * * ** ** * * ****** * * consensus_2831#0 TTTTTCAATAATATGATGT--ATTAACAATTAAAT-GAAAAATAATATA--ATTTGAAAC 410 consensus_2831#1 AAATCCAATATCAAAATGTTTATTATCCTTTTTCTTGACTGATGCTAAAGCATTAAAAAA 400 * ***** * **** **** * ** * ** ** ** * *** *** consensus_2831#0 AATAATCATGTCAGAAGTAAATAGAAAACAAGATATAAAGAAAAGAAAAGAAATGTTATA 470 consensus_2831#1 ACCGATCATAGCAGAAATTCCTGCTATTCCAGTCAAGAATAATGTTTCATATAACATTTC 460 * ***** ***** * * * * ** * ** ** * * * * * consensus_2831#0 TGAAACATTATTCTTGACTGGAATAGCAGGAAT- 503 consensus_2831#1 TTTTCTTTTCTTTATATCTTGTTTTCTATTTACT 494 * ** ** * ** * * * * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |