These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2838#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 461 fasta sequence [GCAGGACAAGTCTTGTTCACGATGTGGCAGCACCAAGAGTTGAGAGACGTTTACAAGAAGCACGGTTGGAAGGAGCAAGATTTTGTAACGAAAACGGTGGCTGCGCGAAATTCAGGGCCTAATTCACCCAACAACGCGAATAGCACGTTGAATCGACCGATGGCGAGTCAAGGGAGCACCAGATACGAGGACAGAACGATCCAGAGAGCGAACATGAACTCGAATAACGTTGGTCGACCTACCATTTATCAGCCTCAACCGAAACCCGGTGAGCCGCTCTACGCGCAAGTTAACTTGGAGAAGAAAAAGAAGCGGCAGTATGAGCTGGGGGTGGGCCAGGCGCAGGGTCAGGGGGCGGTGGTCGGCTCGGGGGTGGCGCCCAATGTGCCCGCGGCCGGCCAATGGGTGGCCGACGGCGTGGGCGTCCCCGACGGCTCGGCCGCGACAGCGACGGTGAACGT] [+] EMBL BI516352 [GCAGGACAAGTCTTGTTCACGATGTGGCAGCACCAAGAGTTGAGAGACGTTTACAAGAAGCACGGTTGGAAGGAGCAAGATTTTGTAACGAAAACGGTGGCTGCGCGAAATTCAGGGCCTAATTCACCCAACAACGCGAATAGCACGTTGAATCGACCGATGGCGAGTCAAGGGAGCACCAGATACGAGGACAGAACGATCCAGAGAGCGAACATGAACTCGAATAACGTTGGTCGACCTACCATTTATCAGCCTCAACCGAAACCCGGTGAGCCGCTCTACGCGCAAGTTAACTTGGAGAAGAAAAAGAAGCGGCAGTATGAGCTGGGGGTGGGCCAGGCGCAGGGTCAGGGGGCGGTGGTCGGCTCGGGGGTGGCGCCCAATGTGCCCGCGGCCGGCCAATGGGTGGCCGACGGCGTGGGCGTCCCCGACGGCTCGGCCGCGACAGCGACGGTGAACGT] consensusID : consensus_2838#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 389 fasta sequence [GATCCACCCCCGGGTACCCTCAGAGCCAGGGCTCTAAACTAACCGTTGGCTTGTGTGTGTGTTGCAGCAACCGAAACCCGGTGAGCCGCTCTACGCGCAAGTTAACTTGGAGAAGAAAAAGAAGCGGCAGTATGAGCTGGGGGTGGGCCAGGCGCAGGGTCAGGGGGCGGTGGTCGGCTCGGGGGTGGCGCCCAATGTGCCCGCGGCCGGCCAATGGGTGGCCGACGGCGTGGGCGTCCCCGACGGCTCGGCCGCGACAGCGACGGTGAACGTGCCACCCAACTCGACGGCCGCCTCGGCGGGCGACTCCTGGGTATAACAGGCGATCCGTGTCCAGGATCCAACCGCCAGGATCCCTCCCTCGAGGCTGCCCCAGAATCGGAACAACG] [+] EMBL BI515242 [GATCCACCCCCGGGTACCCTCAGAGCCAGGGCTCTAAACTAACCGTTGGCTTGTGTGTGTGTTGCAGCAACCGAAACCCGGTGAGCCGCTCTACGCGCAAGTTAACTTGGAGAAGAAAAAGAAGCGGCAGTATGAGCTGGGGGTGGGCCAGGCGCAGGGTCAGGGGGCGGTGGTCGGCTCGGGGGTGGCGCCCAATGTGCCCGCGGCCGGCCAATGGGTGGCCGACGGCGTGGGCGTCCCCGACGGCTCGGCCGCGACAGCGACGGTGAACGTGCCACCCAACTCGACGGCCGCCTCGGCGGGCGACTCCTGGGTATAACAGGCGATCCGTGTCCAGGATCCAACCGCCAGGATCCCTCCCTCGAGGCTGCCCCAGAATCGGAACAACG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2838#0 GCAGGACAAGTCTTGTTCACGATGTGGCAGCACCAAGAGTTGAGAGACGTTTACAAGAAG 60 consensus_2838#1 ------------------------------------------------------------ consensus_2838#0 CACGGTTGGAAGGAGCAAGATTTTGTAACGAAAACGGTGGCTGCGCGAAATTCAGGGCCT 120 consensus_2838#1 ------------------------------------------------------------ consensus_2838#0 AATTCACCCAACAACGCGAATAGCACGTTGAATCGACCGATGGCGAGTCAAGGGAGCACC 180 consensus_2838#1 ------------------------------------------------------------ consensus_2838#0 AGATACGAGGACAGAACGATCCAGAGAGCGAACATGAACTCGAATAACGTTGGTCGACCT 240 consensus_2838#1 -GATCCACCCCCGGG--TACCCTCAGAGCCA----GGGCTCTAA-ACTAACCGTTGGCTT 52 *** * * * * ** ***** * * *** ** * ** * * * consensus_2838#0 ACCATTTATCAGCCTCAACCGAAACCCGGTGAGCCGCTCTACGCGCAAGTTAACTTGGAG 300 consensus_2838#1 GTGTGTGTGTTGCAGCAACCGAAACCCGGTGAGCCGCTCTACGCGCAAGTTAACTTGGAG 112 * ** ********************************************* consensus_2838#0 AAGAAAAAGAAGCGGCAGTATGAGCTGGGGGTGGGCCAGGCGCAGGGTCAGGGGGCGGTG 360 consensus_2838#1 AAGAAAAAGAAGCGGCAGTATGAGCTGGGGGTGGGCCAGGCGCAGGGTCAGGGGGCGGTG 172 ************************************************************ consensus_2838#0 GTCGGCTCGGGGGTGGCGCCCAATGTGCCCGCGGCCGGCCAATGGGTGGCCGACGGCGTG 420 consensus_2838#1 GTCGGCTCGGGGGTGGCGCCCAATGTGCCCGCGGCCGGCCAATGGGTGGCCGACGGCGTG 232 ************************************************************ consensus_2838#0 GGCGTCCCCGACGGCTCGGCCGCGACAGCGACGGTGAACGT------------------- 461 consensus_2838#1 GGCGTCCCCGACGGCTCGGCCGCGACAGCGACGGTGAACGTGCCACCCAACTCGACGGCC 292 ***************************************** consensus_2838#0 ------------------------------------------------------------ consensus_2838#1 GCCTCGGCGGGCGACTCCTGGGTATAACAGGCGATCCGTGTCCAGGATCCAACCGCCAGG 352 consensus_2838#0 ------------------------------------- consensus_2838#1 ATCCCTCCCTCGAGGCTGCCCCAGAATCGGAACAACG 389 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |