These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2842#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 605 fasta sequence [CTAAAACATTTTTTTGAATAAAATAGACAAAATCTACACCAATGATTTTTTTTAAAATATATGGAGCTTCAACATTTAATTTACACCGCCGTTCCGTTATTCTAATAGAACCATTTTTACTTTCTTCATCAGAAACTATTTCACAACCAACAAAAACAGGAATTTGCGGACAGGTAGGAAATCTGCGCTCATATGCTGAGATGTATCCATTGCTCGCTGGTGTTTAACTTAGTTGTAGCAGTTTGCAAGCTCGCATCATGACAATTAAGGAAGATACTTCAGGAATTGTCTGCTGTTATTTGCCTTCTGCTTTCTTGAATCATCATCACGAGTGGTAAAGGATGCTTATACACCCGAACAGGCGATTGATATTGTTGAACCATATCACGTCTTCTTATAAATTGATCACTAATAAAAACGAGAAAAAATAAATTTTATAGGTTATAATAAGCCAATTTTTAACCTTTTATTTCATTTAATATTAATATCTTTTCACTTTATAATTATTAAAAAATATTTCAATATGAATTATAAATTATGCAACTTATAAATAAAAACTTGATGTAATTAATATTTCATTATATACTATACAACACAGAAAAAAA] [+] EMBL BI506739 [CTAAAACATTTTTTTGAATAAAATAGACAAAATCTACACCAATGATTTTTTTTAAAATATATGGAGCTTCAACATTTAATTTACACCGCCGTTCCGTTATTCTAATAGAACCATTTTTACTTTCTTCATCAGAAACTATTTCACAACCAACAAAAACAGGAATTTGCGGACAGGTAGGAAATCTGCGCTCATATGCTGAGATGTATCCATTGCTCGCTGGTGTTTAACTTAGTTGTAGCAGTTTGCAAGCTCGCATCATGACAATTAAGGAAGATACTTCAGGAATTGTCTGCTGTTATTTGCCTTCTGCTTTCTTGAATCATCATCACGAGTGGTAAAGGATGCTTATACACCCGAACAGGCGATTGATATTGTTGAACCATATCACGTCTTCTTATAAATTGATCACTAATAAAAACGAGAAAAAATAAATTTTATAGGTTATAATAAGCCAATTTTTAACCTTTTATTTCATTTAATATTAATATCTTTTCACTTTATAATTATTAAAAAATATTTCAATATGAATTATAAATTATGCAACTTATAAATAAAAACTTGATGTAATTAATATTTCATTATATACTATACAACACAGAAAAAAA] consensusID : consensus_2842#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 529 fasta sequence [AACCAAAATACCTGCACTTTTCGATAACTGTTACTCTAGACGAAAAACTTTCATTATATGCTTCTATTTCTAGAATGCTATTTCGCCTATCTAAAACATTTTTTTGAATAAAATAGACAAAATCTACACCAATGATTTTTTTTAAAATATATGGAGCTTCAACATTTAATTTACACCGCCGTTCCGTTATTCTAATAGAACCATTTTTACTTTCTTCATCAGAAACTATTTCACAACCAACAAAAACAGGAATTTGCGGACAGGTAGGAAATCTGCGCTCATATGCCATCATCACGAGTGGAAAAGGATGCTTATACACCCGAACAGGCGATTGATATTGTTGAACCATATCACGTCTTCTTATAAATTGATCACTAATAAAAACGAGAAAAAATAAATTTTATAGGTTATAATAAGCCAATTTTTAACCTTTTATTTCATTTAATATTAATATCTTTTCACTTTATAATTATTAAAAAATATTTCAATATGAATTATAAATTATGCAACTTATAAATAAAAACTTGAT] [-] EMBL BE844571 [AACCAAAATACCTGCACTTTTCGATAACTGTTACTCTAGACGAAAAACTTTCATTATATGCTTCTATTTCTAGAATGCTATTTCGCCTATCTAAAACATTTTTTTGAATAAAATAGACAAAATCTACACCAATGATTTTTTTTAAAATATATGGAGCTTCAACATTTAATTTACACCGCCGTTCCGTTATTCTAATAGAACCATTTTTACTTTCTTCATCAGAAACTATTTCACAACCAACAAAAACAGGAATTTGCGGACAGGTAGGAAATCTGCGCTCATATGCCATCATCACGAGTGGAAAAGGATGCTTATACACCCGAACAGGCGATTGATATTGTTGAACCATATCACGTCTTCTTATAAATTGATCACTAATAAAAACGAGAAAAAATAAATTTTATAGGTTATAATAAGCCAATTTTTAACCTTTTATTTCATTTAATATTAATATCTTTTCACTTTATAATTATTAAAAAATATTTCAATATGAATTATAAATTATGCAACTTATAAATAAAAACTTGAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2842#0 ------------------------------------------------------------ consensus_2842#1 AACCAAAATACCTGCACTTTTCGATAACTGTTACTCTAGACGAAAAACTTTCATTATATG 60 consensus_2842#0 ------------------------------CTAAAACATTTTTTTGAATAAAATAGACAA 30 consensus_2842#1 CTTCTATTTCTAGAATGCTATTTCGCCTATCTAAAACATTTTTTTGAATAAAATAGACAA 120 ****************************** consensus_2842#0 AATCTACACCAATGATTTTTTTTAAAATATATGGAGCTTCAACATTTAATTTACACCGCC 90 consensus_2842#1 AATCTACACCAATGATTTTTTTTAAAATATATGGAGCTTCAACATTTAATTTACACCGCC 180 ************************************************************ consensus_2842#0 GTTCCGTTATTCTAATAGAACCATTTTTACTTTCTTCATCAGAAACTATTTCACAACCAA 150 consensus_2842#1 GTTCCGTTATTCTAATAGAACCATTTTTACTTTCTTCATCAGAAACTATTTCACAACCAA 240 ************************************************************ consensus_2842#0 CAAAAACAGGAATTTGCGGACAGGTAGGAAATCTGCGCTCATATGCTGAGATGTATCCAT 210 consensus_2842#1 CAAAAACAGGAATTTGCGGACAGGTAGGAAATCTGCGCTCATATGC-------------- 286 ********************************************** consensus_2842#0 TGCTCGCTGGTGTTTAACTTAGTTGTAGCAGTTTGCAAGCTCGCATCATGACAATTAAGG 270 consensus_2842#1 ------------------------------------------------------------ consensus_2842#0 AAGATACTTCAGGAATTGTCTGCTGTTATTTGCCTTCTGCTTTCTTGAATCATCATCACG 330 consensus_2842#1 --------------------------------------------------CATCATCACG 296 ********** consensus_2842#0 AGTGGTAAAGGATGCTTATACACCCGAACAGGCGATTGATATTGTTGAACCATATCACGT 390 consensus_2842#1 AGTGGAAAAGGATGCTTATACACCCGAACAGGCGATTGATATTGTTGAACCATATCACGT 356 ***** ****************************************************** consensus_2842#0 CTTCTTATAAATTGATCACTAATAAAAACGAGAAAAAATAAATTTTATAGGTTATAATAA 450 consensus_2842#1 CTTCTTATAAATTGATCACTAATAAAAACGAGAAAAAATAAATTTTATAGGTTATAATAA 416 ************************************************************ consensus_2842#0 GCCAATTTTTAACCTTTTATTTCATTTAATATTAATATCTTTTCACTTTATAATTATTAA 510 consensus_2842#1 GCCAATTTTTAACCTTTTATTTCATTTAATATTAATATCTTTTCACTTTATAATTATTAA 476 ************************************************************ consensus_2842#0 AAAATATTTCAATATGAATTATAAATTATGCAACTTATAAATAAAAACTTGATGTAATTA 570 consensus_2842#1 AAAATATTTCAATATGAATTATAAATTATGCAACTTATAAATAAAAACTTGAT------- 529 ***************************************************** consensus_2842#0 ATATTTCATTATATACTATACAACACAGAAAAAAA 605 consensus_2842#1 ----------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |