These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2845#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 476 fasta sequence [CAAATATTCCTGAACTAAATTTGTGGACTGAATCAAGAAACAATTTATATGGACAAACATGTAATCCATATGATACCACTAGAAATGTTGGTGGAAGTAGTGGTGGAGAAGCAGCAATTACTGCTGCTTGTGGAACTGCATTTTCTGTTGCCAGTGATATTGGTGGTTCTATTAGAATGCCAGCTTTCTTCAATGGAGTATTTGGATTTAAACCAACTGCAGGTTTAACACCACTAAAAGGTATTGGACTTCGACAAGAAGATTATCCTAACTCAATGGCAGAAGTAGGTCCAATATGTAAGAAAGCAGAAGATTTAATACCTCTTTTAAAAGTTTTAATTCAAGATAAAATATCATTACTTAATCTTAATGCAGAAGTAGATATAACACAACTTAATATTTTTTATCAAGAAAATTCAGGTGATATAAGAGCAAGTAAAATAAATTATGAAATGAGAACAGCTCTATTAAAAGTT] [+] EMBL BI511514 [CAAATATTCCTGAACTAAATTTGTGGACTGAATCAAGAAACAATTTATATGGACAAACATGTAATCCATATGATACCACTAGAAATGTTGGTGGAAGTAGTGGTGGAGAAGCAGCAATTACTGCTGCTTGTGGAACTGCATTTTCTGTTGCCAGTGATATTGGTGGTTCTATTAGAATGCCAGCTTTCTTCAATGGAGTATTTGGATTTAAACCAACTGCAGGTTTAACACCACTAAAAGGTATTGGACTTCGACAAGAAGATTATCCTAACTCAATGGCAGAAGTAGGTCCAATATGTAAGAAAGCAGAAGATTTAATACCTCTTTTAAAAGTTTTAATTCAAGATAAAATATCATTACTTAATCTTAATGCAGAAGTAGATATAACACAACTTAATATTTTTTATCAAGAAAATTCAGGTGATATAAGAGCAAGTAAAATAAATTATGAAATGAGAACAGCTCTATTAAAAGTT] consensusID : consensus_2845#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 366 fasta sequence [AGCAAAAGGTATGCTTCATACAATGGGTTTAATAAGTAGACGTAATTTTCGTTCTCAAGAAGATGCAACTGCAATACATCTTATAAAAAATGTTGGTGGAATTTTAATAGCAAAAACAAATATTCCTGAACTAAATTTGTGGACTGAATCAAGAAACAATTTATATGGACAAACATGTAATCCATATGATACCACTAGAAATGTTGGTGGAAGTAGTGGTGGAGAAGCAGCAATTACTGCTGCTTGTGGAACTGCATTTTCTGTTGCCAGTGATATTGGTGGTTCTATTAGAATGCCAGCTTTCTTCAATGGAGTATTTGGATTTAAACCAACTGCAGGTTTAACAAAAAAAAAAAAAAAAAAAGC] [-] EMBL BI511249 [AGCAAAAGGTATGCTTCATACAATGGGTTTAATAAGTAGACGTAATTTTCGTTCTCAAGAAGATGCAACTGCAATACATCTTATAAAAAATGTTGGTGGAATTTTAATAGCAAAAACAAATATTCCTGAACTAAATTTGTGGACTGAATCAAGAAACAATTTATATGGACAAACATGTAATCCATATGATACCACTAGAAATGTTGGTGGAAGTAGTGGTGGAGAAGCAGCAATTACTGCTGCTTGTGGAACTGCATTTTCTGTTGCCAGTGATATTGGTGGTTCTATTAGAATGCCAGCTTTCTTCAATGGAGTATTTGGATTTAAACCAACTGCAGGTTTAACAAAAAAAAAAAAAAAAAAAGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2845#0 ------------------------------------------------------------ consensus_2845#1 AGCAAAAGGTATGCTTCATACAATGGGTTTAATAAGTAGACGTAATTTTCGTTCTCAAGA 60 consensus_2845#0 --------------------------------------------------------CAAA 4 consensus_2845#1 AGATGCAACTGCAATACATCTTATAAAAAATGTTGGTGGAATTTTAATAGCAAAAACAAA 120 **** consensus_2845#0 TATTCCTGAACTAAATTTGTGGACTGAATCAAGAAACAATTTATATGGACAAACATGTAA 64 consensus_2845#1 TATTCCTGAACTAAATTTGTGGACTGAATCAAGAAACAATTTATATGGACAAACATGTAA 180 ************************************************************ consensus_2845#0 TCCATATGATACCACTAGAAATGTTGGTGGAAGTAGTGGTGGAGAAGCAGCAATTACTGC 124 consensus_2845#1 TCCATATGATACCACTAGAAATGTTGGTGGAAGTAGTGGTGGAGAAGCAGCAATTACTGC 240 ************************************************************ consensus_2845#0 TGCTTGTGGAACTGCATTTTCTGTTGCCAGTGATATTGGTGGTTCTATTAGAATGCCAGC 184 consensus_2845#1 TGCTTGTGGAACTGCATTTTCTGTTGCCAGTGATATTGGTGGTTCTATTAGAATGCCAGC 300 ************************************************************ consensus_2845#0 TTTCTTCAATGGAGTATTTGGATTTAAACCAACTGCAGGTTTAACACCACTAAAAGGTAT 244 consensus_2845#1 TTTCTTCAATGGAGTATTTGGATTTAAACCAACTGCAGGTTTAACAAAAAAAAAAAAAAA 360 ********************************************** * **** * consensus_2845#0 TGGACTTCGACAAGAAGATTATCCTAACTCAATGGCAGAAGTAGGTCCAATATGTAAGAA 304 consensus_2845#1 AAAAGC------------------------------------------------------ 366 * consensus_2845#0 AGCAGAAGATTTAATACCTCTTTTAAAAGTTTTAATTCAAGATAAAATATCATTACTTAA 364 consensus_2845#1 ------------------------------------------------------------ consensus_2845#0 TCTTAATGCAGAAGTAGATATAACACAACTTAATATTTTTTATCAAGAAAATTCAGGTGA 424 consensus_2845#1 ------------------------------------------------------------ consensus_2845#0 TATAAGAGCAAGTAAAATAAATTATGAAATGAGAACAGCTCTATTAAAAGTT 476 consensus_2845#1 ---------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |