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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2868#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 619 fasta sequence
[TTTTACTCTCTTTTTATGTTTTACAAATTTAATTGTTGCATGCACTTATTAAATAACAAACAATGACAATGATCTTTTTATAGATTATTATTATATATTAATACAGAGAACAGTTTAATAGTCAATTAATTTGTGATATTTTGAAAATTATATCTATATGTACACGTGTATCGTAAACCATAAAACAATCGTTTCTTATCTGAACAATAGTAAATTTCAACTTTTTTCAAAAAGGAATTTATTCTTGAAACATTATTGATTTTATTTCAATGCTGAAATGATGAAATCGAGGAAGGCGGTGACCCTAGTATAGACTCCAGGAAATCCGGGTTCAGCACATTTATAACCATAGGATACAACTCCTATTTGATAATAATACCAATGTTGCGGTAACATTAAAGGGCCTCCGCTATCACCCTGACAAGCATCTTTTCCACCTTGTCTGTATGCAGCGCATAATACACGATTATCGATCTCAGCGGCTTTAAATTTGGAATAAGCTTGTTTGCATTGTTCATTGTTGATTACTGGTAACTGTATCTCTAATAATATATCGCTAGCTGGTCCTCGGGTTTCAGTTGATCCCCATCCAGCAACGAAGGGATAGTTTCGAACGAAG]
[+] EMBL BE844488 [TTTTACTCTCTTTTTATGTTTTACAAATTTAATTGTTGCATGCACTTATTAAATAACAAACAATGACAATGATCTTTTTATAGATTATTATTATATATTAATACAGAGAACAGTTTAATAGTCAATTAATTTGTGATATTTTGAAAATTATATCTATATGTACACGTGTATCGTAAACCATAAAACAATCGTTTCTTATCTGAACAATAGTAAATTTCAACTTTTTTCAAAAAGGAATTTATTCTTGAAACATTATTGATTTTATTTCAATGCTGAAATGATGAAATCGAGGAAGGCGGTGACCCTAGTATAGACTCCAGGAAATCCGGGTTCAGCACATTTATAACCATAGGATACAACTCCTATTTGATAATAATACCAATGTTGCGGTAACATTAAAGGGCCTCCGCTATCACCCTGACAAGCATCTTTTCCACCTTGTCTGTATGCAGCGCATAATACACGATTATCGATCTCAGCGGCTTTAAATTTGGAATAAGCTTGTTTGCATTGTTCATTGTTGATTACTGGTAACTGTATCTCTAATAATATATCGCTAGCTGGTCCTCGGGTTTCAGTTGATCCCCATCCAGCAACGAAGGGATAGTTTCGAACGAAG]
consensusID : consensus_2868#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 574 fasta sequence
[TAAAAACTACCTTAAGCAATCTCTGTGCAGGTATGAAAATAACGATCCATTCGTTTGCTGCCCAAAGAATTCAGGCAGAGAGAGCAAAATAGAAAGAGAAAATTCGTATGGACCCTTGTTACCACCACAATGTGGTTTCAATAATATCAGTCACACAAGAGTAGTTGGTGGTATTCCAGCTAAACTTGGTGCTTGGCCCTGGCTTACTGTATTAGGTTTTCGTAGTTCTTTGAACCCTTCGCAACCAAGATGGCTATGTGGAGGTTCCTTGATATCGGCTAGACACGTTCTAACTGCGGCGCATTGCGCAGTTCGTAAGGATTTATATGTAGTTCGTATCGGAGATTTAGATTTATCACGAGATGATGATGATGCTCATCCTATTCAAGTAGAAATCGAAGATAAATTGATACATCCTGATTATAGTACTACGACATTTGTAAACGATATTGCCGTTCTCAGATTGGCACAAGATGTACAATTTACAGAATATGTATATCCCATTTGTCTTCCTGTAGAAGATAATCTTCGAAACAATAACTTCGTTCGAAACTATCCCTTCGTTGCTGGATGG]
[+] EMBL BI507178 [TAAAAACTACCTTAAGCAATCTCTGTGCAGGTATGAAAATAACGATCCATTCGTTTGCTGCCCAAAGAATTCAGGCAGAGAGAGCAAAATAGAAAGAGAAAATTCGTATGGACCCTTGTTACCACCACAATGTGGTTTCAATAATATCAGTCACACAAGAGTAGTTGGTGGTATTCCAGCTAAACTTGGTGCTTGGCCCTGGCTTACTGTATTAGGTTTTCGTAGTTCTTTGAACCCTTCGCAACCAAGATGGCTATGTGGAGGTTCCTTGATATCGGCTAGACACGTTCTAACTGCGGCGCATTGCGCAGTTCGTAAGGATTTATATGTAGTTCGTATCGGAGATTTAGATTTATCACGAGATGATGATGATGCTCATCCTATTCAAGTAGAAATCGAAGATAAATTGATACATCCTGATTATAGTACTACGACATTTGTAAACGATATTGCCGTTCTCAGATTGGCACAAGATGTACAATTTACAGAATATGTATATCCCATTTGTCTTCCTGTAGAAGATAATCTTCGAAACAATAACTTCGTTCGAAACTATCCCTTCGTTGCTGGATGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2868#0 TTTTACTCTCTTTTTATGTTTTACAAATTTAATTGTTGCATGCACTTATTAAATAACAAA 60
consensus_2868#1 -----------------------TAAA---AACTACCTTAAGCAATCTCTGTGCAG-GTA 33
*** ** * * *** * * * *
consensus_2868#0 CAATGACAATGATCTTTTTATAGATTATTATTATATATTAA-TACAGAGAACAGTTTAAT 119
consensus_2868#1 TGAAAATAACGATCCATTCGTTTGCTGCCCAAAGAATTCAGGCAGAGAGAGCAAAATAG- 92
* * ** **** ** * * * * * * * ***** ** **
consensus_2868#0 AGTCAATTAATTTGTG-ATATTTTGAAAATTATATCTATATGTACACGTGTATCGTAAAC 178
consensus_2868#1 AAAGAGAAAATTCGTATGGACCCTTGTTACCACCACAATGTGGTTTCA-ATAATATCAGT 151
* * **** ** * * * * * ** ** * ** * *
consensus_2868#0 CATAAAACAATCGTTTCT--TATCTGAACAATAGTAAATTTCAACTTTTTTCAAAAAGGA 236
consensus_2868#1 CACACAAGAGTAGTTGGTGGTATTCCAGCTAAACTTGGTGCTTGGCCCTGGCTTACTGTA 211
** * ** * * *** * *** * * * * * * * * * * *
consensus_2868#0 ATTTATTCTTGAAACATTATTGATTTTATTTCAATGCTGAAATGATGAAATCGAGGAAGG 296
consensus_2868#1 TTAGGTTTTCGTAGT-TCTTTGAACCCTTCGCAA--CCAAGATGGCTATGTGGAGGTTCC 268
* ** * * * * **** * *** * * *** * * ****
consensus_2868#0 CGGTGACC--CTAGTATAGACTCCAGGAAATCCGGGTTCAGCACATTTATAACCATAGG- 353
consensus_2868#1 TTGATATCGGCTAG-ACACGTTCTAACTGCGGCGCATTGCGCA-GTTCGTAAGGATTTAT 326
* * * **** * * ** * ** ** *** ** *** **
consensus_2868#0 ATACAACTCCTATTTGATAATAATACCAATGTTGCGGTAACATTAAAGGGCCTCCGCTAT 413
consensus_2868#1 ATGTAGTTCGTATCGGAGATTTAGATTTATCACGAGATGATGATGATGCTCATCCTATTC 386
** * ** *** ** * * * * ** * * * * * * * * *** *
consensus_2868#0 CACCCTGA--CAAGCATCTTTTCCACCTTGTCTGTATGCAGCGC-ATAATACACGATTAT 470
consensus_2868#1 AAGTAGAAATCGAAGATAAATTG-ATACATCCTGATTATAGTACTACGACATTTG-TAAA 444
* * * * ** ** * *** * ** * * * * * * *
consensus_2868#0 CGATCTCAGCGGCTTTAAATTTGGAATAAGCTTGTTTGCATTGTTCATTGTTGATTACTG 530
consensus_2868#1 CGATATT-GCCGTTCTCAGATTGGCACAAGAT-GTACAATTTACAGAATATGTATATCCC 502
**** * ** * * * * **** * *** * ** ** * * * ** *
consensus_2868#0 GTAACTGTATCTCTAATA-ATATATCGCTAGCTGGTCCTCGGGTTTCAGTTGATCCCCAT 589
consensus_2868#1 ATTTGTCTTCCTGTAGAAGATAATCTTCGAAACAATAACTTCGTTCGAAACTATCCC--T 560
* * * ** ** * *** * * * *** * ***** *
consensus_2868#0 CCAGCAACGAAGGGATAGTTTCGAACGAAG 619
consensus_2868#1 TCGTTGCTGGATGG---------------- 574
* * * **
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |