These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2870#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 577 fasta sequence [ACAAAAATATCGATCGTTCTGAATATATCTATATAGAGCATCCTTACGCGACGAAAAAAGATAAAAAAAAAAAAAAGAAATAAATAGATTCGGGTTTGGGATATATAAGAAGTAAACGTAAATTTCGAAGAGAAAAAAAAAGGGCATGTTATGTCTGGTTAATAATAATAATAAACGACGAGAGTCGGATCGCGTCCGTGGATGTTCGGTCGTCGAATAACAGGAGCAGGAAATCGGTGAATCGATAGATTTTCCGTATTCTCTCTGAACGCGATAAGCGATATTGAACCGCGAACTCACGTTTGGAATCTTGTCGCTGCCTCTACTCTCACCGATTCGCCGATTTTCTTCTCGCGTTGTAGTAGTAGCTACTTTCTTCTAGCGATCTATTATTGATCTGTCTGAAGCGATAACGAAGACAAAAAAAAGAAAAAAGAAAGAAAAAAGAAAAAAAGAGCCAAGCGTTTACTGTACAATTATATTCTTTTACGTTTAACGAAATTACCATTGAGTAGACGAGTAGTATATTTTACATTATCGATACAGATACGATAGCGTTACCCCGTCTTACCCTAAT] [+] EMBL BI506349 [ACAAAAATATCGATCGTTCTGAATATATCTATATAGAGCATCCTTACGCGACGAAAAAAGATAAAAAAAAAAAAAAGAAATAAATAGATTCGGGTTTGGGATATATAAGAAGTAAACGTAAATTTCGAAGAGAAAAAAAAAGGGCATGTTATGTCTGGTTAATAATAATAATAAACGACGAGAGTCGGATCGCGTCCGTGGATGTTCGGTCGTCGAATAACAGGAGCAGGAAATCGGTGAATCGATAGATTTTCCGTATTCTCTCTGAACGCGATAAGCGATATTGAACCGCGAACTCACGTTTGGAATCTTGTCGCTGCCTCTACTCTCACCGATTCGCCGATTTTCTTCTCGCGTTGTAGTAGTAGCTACTTTCTTCTAGCGATCTATTATTGATCTGTCTGAAGCGATAACGAAGACAAAAAAAAGAAAAAAGAAAGAAAAAAGAAAAAAAGAGCCAAGCGTTTACTGTACAATTATATTCTTTTACGTTTAACGAAATTACCATTGAGTAGACGAGTAGTATATTTTACATTATCGATACAGATACGATAGCGTTACCCCGTCTTACCCTAAT] consensusID : consensus_2870#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 517 fasta sequence [AAAATAGAAAAAGAAAAAGTAAAAAAGAGACCTGTACTAAGGATTACTTATTAAATAAATGAACGGTGTTTTTCCGCCTATGAGTCGTATTTGCATCAGATGAATATACAGATGCATCTCACTTCTCACACTCTCTCTCTCTCTCTCTCTCTCTACCTTTCTCTTTCTCTCTCAGTTATACAGAGAACAGAACGAGATAGATTGTTATTTTCCATCTTTAATGCGATATTATTGTTATTATCATTATTATTATTATTATTATCAACACTGTACAAAGTTGGCAATAATTATTAAGAAATCCATCGTCGTAACGCGTTTATTAGCTGTGTTTTGAAGAAAGAAAGAAACGCATGACGAGATCCACACTCGTCATTCAAGACAGAAGAGAAGAAAATTCGTTGCAACTACAGCGTATAAAAAAAAAAAAAATAATAAATAAATAAATAAAGCGTGCCCTTTTACCTAATCTAATCCTGCACAAAAATATCGATCGTTCTGAATATATCTATATAGAGCA] [+] EMBL BE844483 [AAAATAGAAAAAGAAAAAGTAAAAAAGAGACCTGTACTAAGGATTACTTATTAAATAAATGAACGGTGTTTTTCCGCCTATGAGTCGTATTTGCATCAGATGAATATACAGATGCATCTCACTTCTCACACTCTCTCTCTCTCTCTCTCTCTCTACCTTTCTCTTTCTCTCTCAGTTATACAGAGAACAGAACGAGATAGATTGTTATTTTCCATCTTTAATGCGATATTATTGTTATTATCATTATTATTATTATTATTATCAACACTGTACAAAGTTGGCAATAATTATTAAGAAATCCATCGTCGTAACGCGTTTATTAGCTGTGTTTTGAAGAAAGAAAGAAACGCATGACGAGATCCACACTCGTCATTCAAGACAGAAGAGAAGAAAATTCGTTGCAACTACAGCGTATAAAAAAAAAAAAAATAATAAATAAATAAATAAAGCGTGCCCTTTTACCTAATCTAATCCTGCACAAAAATATCGATCGTTCTGAATATATCTATATAGAGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2870#0 ACAAAAATATCGATCGTTCTGAATATATCTATATAGAGCATCCTTACGCGACGAAAAAAG 60 consensus_2870#1 ---------------------------------------------------------AAA 3 ** consensus_2870#0 ATAAAAAAAAAAAAAAGAAATAAATAGATTCGGGTTTGGGAT-ATATAAGAAGTAAACGT 119 consensus_2870#1 ATAGAAAAAGAAAAAGTAAA-AAAGAGACCTGTACTAAGGATTACTTATTAAATAAATGA 62 *** ***** ***** *** *** *** * * **** * ** ** **** * consensus_2870#0 AAATTTCGAAGAGAAAAAAAAAGGGCATGTTATGTCTGGTTAATAATAATAATAAACGAC 179 consensus_2870#1 ACGGTGTTTTTCCGCCTATGAGTCGTAT-TTGCATCAGATGAATA-TACAGATGCATCTC 120 * * * * * ** ** ** * * **** ** ** * * consensus_2870#0 GAGAGTCGGATCGCGTCCGTGGATGT-----TCGGTCGTCGAATAACAGGAGCAGGAAAT 234 consensus_2870#1 ACTTCTCACACTCTCTCTCTCTCTCTCTCTCTCTACCTTTCTCTTTCTCTCTCAGTTATA 180 ** * ** * * * ** * * * * *** * consensus_2870#0 CGGTGAATCGATAGATTTTCCGTATTCTCTCTGAACGCGATAAGCGATATTGAACCGCGA 294 consensus_2870#1 CAGAGAACAGAACGAGATAGATTGTTATTTTCCATCTTTA-ATGCGATATT--ATTGTTA 237 * * *** ** ** * * ** * * * * * * ******** * * * consensus_2870#0 ACTCACGTTTGGAATCTTGTCGCTGCCTCTACTCTCACCGATTCGCCGATTTTCTTCTCG 354 consensus_2870#1 -TTATCATTATTATTATTATTATTATCAACACTGT-ACAAAGTTGGCAATAAT------- 288 * * ** * * ** * * * *** * ** * * * * ** * consensus_2870#0 CGTTGTAGTAGTAGCTACTTTCTTCTAGCG-ATCTATTATTGATCTGTCTGAAGCGATAA 413 consensus_2870#1 -----TATTAAGAAATCCATCGTCGTAACGCGTTTATTAGCTGTGT-TTTGAAGAAAGAA 342 ** ** * * * * * ** ** * ***** * * * ***** * ** consensus_2870#0 CGAAG-ACAAAAAAAAGAAAAAAGAAAGAAAAAAGAAAAAAAGAGCCAAGCGTTTACTGT 472 consensus_2870#1 AGAAACGCATGACGAGATCCACACTCGTCATTCAAGACAGAAGAGAAGAAAATTCGTTG- 401 *** ** * * * * * * * * ***** * ** ** consensus_2870#0 ACAATTATATTCTTTTACGTTTAACGAAATTACCATTGAGTAGACGAGTAGTATA-TTTT 531 consensus_2870#1 -CAACTACAGCGTATAAAAAAAAAAAAAATAATAAATAAATAAATAAAGCGTGCCCTTTT 460 *** ** * * * * ** **** * * * * ** * * ** **** consensus_2870#0 ACATTATCGATACAGATACGATAGCGTTACCCCGTCTTACCCTAAT----------- 577 consensus_2870#1 ACCTAATCTAATCCTGCACAAAAATATCGATCGTTCTGAATATATCTATATAGAGCA 517 ** * *** * * ** * * * * *** * ** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |