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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_29#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1937 fasta sequence
[TTGAAACTGTCGTTTGCAAAATATTTGCAGCATCCAAGAACAATGACAACTTGGTTGTTGCTGGTCGTGTGCCTTGGCATAGCTTGTCAAGGTATCACAAGCGTCACTGTTCGAGAAAATTCTCCGAGAAAGTTGGCAAATTCGATGAACGTGATTCACGAATGGAAGTATCTCGATTATGATTTTGGTAGCGACGAAAGGAGGCAAGCTGCGATGCAATCTGGCGAGTATGACCATACGAAAAATTATCCCTTCGATGTCGATCAATGGCGTGGTATGACTTTTGTAACCGTACCAAGATACAAAGGTGTACCTTCTTCTTTGAACGTGATATCTGAGAAAATTGGCAACGGTGGACGACTTCTACAACCGTATCCTGATTGGTCGTGGGCGAACTATAAAGATTGCTCTGGAATAGTGAGCGCTTACAAAATTGCGATCGACAAGTTCGACAGATTGTGGATTCTGGACTCAGGTATTATCAATAATACTCAACCCATGTGTTCACCAAAATTGCATGTCTTTGATCTCAATACCTCACATCAGCTTAAGCAAGTTGTGATGCCGCACGATATTGCCGTAAATGCCAGCACAGGGAATGGGGGACTCGTATCACTAGTTGTTCAAGCTATGGATCCTGTGAATACTATCGTGTATATGGCAGATGACAAAGGTGATGCTTTAATCGTCTACCAAAATTCTGACGAATCTTTCCATCGATTGACTTCCAACACTTTCGATTACGATCCCAAATATATCAAAATGATGGCCGCGGGAGAAAGTTTCACAGCGCAAGATGGAATTTTTGGAATGGCACTCAGTCCCATGACAAACAATCTTTATTACAGCCCTCTTTCTTCTCGCAGTTTGTATTATGTTAATACAAAACCATTCATGAAATCAGAATATGGAGCAAATAACGTACAATATCAAGGTGTCCAAGATATTTTCAACACTGAATCGATTGCTAAAATAATGTCGAAAAATGGCGTTCTCTTTTTCGGCCTCATGAATAATTCAGCTATTGGTTGTTGGAACGAGCATCAACCACTTCAGAGAGAAAATATGGATATGGTCGCTCAGAATGAAGAG-ACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCCAACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATAGAATGGATAGAATGGATAGAATAGATAGGATGGATAGGATGGATAGGATGGATACAATGGATACAATGGATAGAATAGATAGGATGGATAGGATGGATAGAATAGATAGGATAGATAGGATGGATACAATGGATACAATGGATACAATGGATAGAACAGATAAGATGAGTAGCATGGATAGGATGGATAGAATGGATAGGGTGGATAGGATGGATACAATGGATAGAACAGATAAGATGAGTAGCATGGATAGGATGGATAGAATGGATAGGGTGGATACAATGGATACAATGGATACAATGGATAGAATGGATAGGATGGATAGGATGGATAGAATGGATAGAATGGATAGGATGGATACAATGGATAGAACAGATAAGATGAGTAGGATAGATAGAATGGATAAAATAGATAGAATGGATAGGATGGATAGGACAAATAGAATGGATAGAATGAATAGGATGAATAGACAAATGAATGAATATATGATGGCTTTAAGTATGAAATTACAGAAATTTATAAATAATGATTATAATTTCAACGAAGTAAACTTCCGAATTTTGGGTGCAAATGTAAACGATTTAATAATGAATACTCGTTGTGCAAATTCTGACAATCAGAATAACAATCAAAATAAGCATAATAATTAAGATGATCGTTCTTTATATTAAAATCTGTTAATCAGTCTTTTCTCGATATAAACCAAATATTCTTTAAAATTTCTTTATATTATAAATGAATAAAATAA]
[+] EMBL AF004842 [TTGAAACTGTCGTTTGCAAAATATTTGCAGCATCCAAGAACAATGACAACTTGGTTGTTGCTGGTCGTGTGCCTTGGCATAGCTTGTCAAGGTATCACAAGCGTCACTGTTCGAGAAAATTCTCCGAGAAAGTTGGCAAATTCGATGAACGTGATTCACGAATGGAAGTATCTCGATTATGATTTTGGTAGCGACGAAAGGAGGCAAGCTGCGATGCAATCTGGCGAGTATGACCATACGAAAAATTATCCCTTCGATGTCGATCAATGGCGTGGTATGACTTTTGTAACCGTACCAAGATACAAAGGTGTACCTTCTTCTTTGAACGTGATATCTGAGAAAATTGGCAACGGTGGACGACTTCTACAACCGTATCCTGATTGGTCGTGGGCGAACTATAAAGATTGCTCTGGAATAGTGAGCGCTTACAAAATTGCGATCGACAAGTTCGACAGATTGTGGATTCTGGACTCAGGTATTATCAATAATACTCAACCCATGTGTTCACCAAAATTGCATGTCTTTGATCTCAATACCTCACATCAGCTTAAGCAAGTTGTGATGCCGCACGATATTGCCGTAAATGCCAGCACAGGGAATGGGGGACTCGTATCACTAGTTGTTCAAGCTATGGATCCTGTGAATACTATCGTGTATATGGCAGATGACAAAGGTGATGCTTTAATCGTCTACCAAAATTCTGACGAATCTTTCCATCGATTGACTTCCAACACTTTCGATTACGATCCCAAATATATCAAAATGATGGACGCGGGAGAAAGTTTCACAGCGCAAGATGGAATTTTTGGAATGGCACTCAGTCCCATGACAAACAATCTTTATTACAGCCCTCTTTCTTCTCGCAGTTTGTATTATGTTAATACAAAACCATTCATGAAATCAGAATATGGAGCAAATAACGTACAATATCAAGGTGTCCAAGATATTTTCAACACTGAATCGATTGCTAAAATAATGTCGAAAAATGGCGTTCTCTTTTTCGGCCTCATGAATAATTCAGCTATTGGTTGTTGGAACGAGCATCAACCACTTCAGAGAGAAAATATGGATATGGTCGCTCAGAATGAAGAG ACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCCAACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATAGAATGGATAGAATGGATAGAATAGATAGGATGGATAGGATGGATAGGATGGATACAATGGATACAATGGATAGAATAGATAGGATGGATAGGATGGATAGAATAGATAGGATAGATAGGATGCATACAATGGATACAATGGATACAATGGATAGAACAGATAAGATGAGTAGCATGGATAGGATGGATAGAATGGATAGGGTGGATAGGATGGATACAATGGATAGAACAGATAAGATGAGTAGCATGGATAGGATGGATAGAATGGATAGGGTGGATACAATGGATACAATGGATACAATGGATAGAATGGATAGGATGGATAGGATGGATAGAATGGATAGAATGGATAGGATGGATACAATGGATAGAACAGATAAGATGAGTAGGATAGATAGAATGGATAAAATAGATAGAATGGATAGGATGGATAGGACAAATAGAATGGATAGAATGAATAGGATGAATAGACAAATGAATGAATATATGATGGCTTTAAGTATGAAATTACAGAAATTTATAAATAATGATTATAATTTCAACGAAGTAAACTTCCGAATTTTGGGTGCAAATGTAAACGATTTAATAATGAATACTCGTTGTGCAAATTCTGACAATCAGAATAACAATCAAAATAAGCATAATAATTAAGATGATCGTTCTTTATATTAAAATCTGTTAATCAGTCTTTTCTCGATATAAACCAAATATTCTTTAAAATTTCTTTATATTATAAATGAATAAAATAA]
[+] EMBL BI502823 [ ATTGACTTCCAACACTTTCGATTACGATCCCAAATATATCAAAATGATGGCCGCGGGAGAAAGTTTCACAGCGCAAGATGGAATTTTTGGAATGGCACTCAGTCCCATGACAAACAATCTTTATTACAGCCCTCTTTCTTCTCGCAGTTTGTATTATGTTAATACAAAACCATTCATGAAATCAGAATATGGAGCAAATAACGTACAATATCAAGGTGTCCAAGATATTTTCAACACTGAATCGATTGCTAAAATAATGTCGAAAAATGGCGTTCTCTTTTTCGGCCTCATGAA ]
[+] EMBL BI504840 [ CGATCCCAAATATATCAAAATGATGGCCGCGGGAGAAAGTTTCACAGCGCAAGATGGAATTTTTGGAATGGCACTCAGTCCCATGACAAACAATCTTTATTACAGCCCTCTTTTTTCTCGCAGTTTGTATTATGTTAATACAAAACCATTCATGAAATCAGAATATGGAGCAAATAACGTACAATATCAAGGTGTCCAAGATATTTTCAACACTGAATCGATTGCTAAAATAATGTCGAAAAATGGCGTTCTCTTTTTCGGCCTCATGAATAATTCAGCTATTGGTTGTTGGAACGAGCATCAACCACTTCAGAGAGAAAATATGGATATGGTCGCTCAGAATGAAGAG ACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCCAACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATAGAA ]
[+] EMBL BI503419 [ AAAATGATGGCCGCGGGAGAAAGTTTCACAGCGCAAGATGGAATTTTTGGAATGGCACTCAGTCCCATGACAAACAATCTTTATTACAGCCCTCTTTCTTCTCGCAGTTTGTATTATGTTAATACAAAACCATTCATGAAATCAGAATATGGAGCAAATAACGTACAATATCAAGGTGTCCAAGATATTTTCAACACTGAATCGATTGCTAAAATAATGTCGAAAAATGGCGTTCTCTTTTTCGGCCTCATGAATAATTCAGCTATTGGTTGTTGGAACGAGCATCAACCACTTCAGAGAGAAAATATGGATATGGTCGCTCAGAATGAAGAG ACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCCAACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATAGAA ]
[+] EMBL BI509613 [ AAATGATGGCCGCGGGAGAAAGTTTCACAGCGCAAGATGGAATTTTTGGAATGGCACTCAGTCCCATGACAAACAATCTTTATTACAGCCCTCTTTCTTCTCGCAGTTTGTATTATGTTAATACAAAACCATTCATGAAATCAGAATATGGAGCAAATAACGTACAATATCAAGGTGTCCAAGATATTTTCAACACTGAATCGATTGCTAAAATAATGTCGAAAAATGGCGTTCTCTTTTTCGGCCTCATGAATAATTCAGCTATTGGTTGTTGGAACGAGCATCAACCACTTCAGAGAGAAAATATGGATATGGTCGCTCAGAATGAAGAG ACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCCAACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATAGAA ]
[+] EMBL BI504459 [ GCAAGATGGAATTTTTGGAATGGCACTCAGTCCCATGACAAACAATCTTTATTACAGCCCTCTTTCTTCTCGCAGTTTGTATTAT TTAATACAAAACCATTCATGAAATCAGAATATGGAGCAAATAACGTACAATATCAAGGTGTCCAAGATATTTTCAACACTGAATCGATTGCTAAAATAATGTCGAAAAATGGCGTTCTCTTTTTCGGCCTCATGAATAATTCAGCTATTGGTTGTTGGAACGAGCATCAACCACTTCAGAGAGAAAATATGGATATGGTCGCTCAGAATGAAGAG ACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCCAACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATAGAATGGATAGAATGGATAGAATAGATAGGATGGATAGGATGGATAGGATGGATACAATGGATACAATGGATAGAATAGATAGGATGGATAGGATGGATAGAATAGATAGGATAGATAGGATGGATACAATGGATACAAT ]
[+] EMBL BI506334 [ TGAATCGATTGCTAAAATAATGTCGAAAAATGGCGTTCTCTTTTTCGGCCTCATGAATAATTCAGCTATTGGTTGTTGGAACGAACATCAACCACTTCAGAGAGAAAATATGGATATGGTCGCTCAGAATGAAGAGNNNTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCCAACAAGATGAATAGGATGCATAGGATGAATAGAGTGGATAGAATGGATAGGATGGATACAATGGATAGAACAGATAAGATGAGTAGGATAG ]
[+] EMBL BI506143 [ GAAAAATGGCGTTCTCTTTTTCGGCCTCATGAATAATTCAGCTATTGGTTGTTGGAACGAGCATCAACCACTTCAGAGAGAAAATATGGATATGGTCGCTCAGAATGAAGAG ACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCCAACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATAGAATGGATAGAATGGATAGAATAGATAGGATGGATAGGATGGATAGGATGGATACAATGGATACAATGGATAGAATAGATAGGATGGATAGGATGGATAGAATAGATAGGATAGATAGGATGGATACAATGGATACAATGGATACAATGGATAGAACAGATAAGATGAGTAGCATGGATAGGATGGATAGAATGGATAGGGTGGATAGG ]
[+] EMBL BI503650 [ TCTTTTTCGGCCTCATGAATAATTCAGCTATTGGTTGTTGGAACGAGCATCAACCACTTCAGAGAGAAAATATGGATATGGTCGCTCAGAATGAAGAG ACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCCAACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATAGAATGGATAGAATGGATAGAATAGATAGGATGGAT ]
[+] EMBL BI503388 [ TCTTTTTCGGCCTCATGAATAATTCAGCTATTGGTTGTTGGAACGAGCATCAACCACTTCAGAGAGAAAATATGGATATGGTCGCTCAGAATGAAGAG ACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCCAACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATAGAATGGAT ]
[+] EMBL BI505710 [ TTGGTTGTTGGAACGAACATCAACCACTTCAGAGAGAAAATATGGATATGGTCGCTCAGAATGAAGAG ACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCCAACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATACAATGGATAGAATAGATAGGATGGATAGGATGGATAGAATAGA ]
consensusID : consensus_29#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 271 fasta sequence
[AGAATGAAGAGACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCCAACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATAGAATGGATAGAATGGATAGAATAGATAGGATGGATACAATGGATACAATGGATACAATGGATAGAACAGATAAGATGAGTAGCATGGATAGGATGGATAGAATGGATAGGGTGGATAGGATGGATACAATGGATAGAACAGATAAGATGAGTAGCATGGATAG]
[+] EMBL BI509691 [AGAATGAAGAGACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCCAACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATAGAATGGATAGAATGGATAGAATAGATAGGATGGATACAATGGATACAATGGATACAATGGATAGAACAGATAAGATGAGTAGCATGGATAGGATGGATAGAATGGATAGGGTGGATAGGATGGATACAATGGATAGAACAGATAAGATGAGTAGCATGGATAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_29#0 TTGAAACTGTCGTTTGCAAAATATTTGCAGCATCCAAGAACAATGACAACTTGGTTGTTG 60
consensus_29#1 ------------------------------------------------------------
consensus_29#0 CTGGTCGTGTGCCTTGGCATAGCTTGTCAAGGTATCACAAGCGTCACTGTTCGAGAAAAT 120
consensus_29#1 ------------------------------------------------------------
consensus_29#0 TCTCCGAGAAAGTTGGCAAATTCGATGAACGTGATTCACGAATGGAAGTATCTCGATTAT 180
consensus_29#1 ------------------------------------------------------------
consensus_29#0 GATTTTGGTAGCGACGAAAGGAGGCAAGCTGCGATGCAATCTGGCGAGTATGACCATACG 240
consensus_29#1 ------------------------------------------------------------
consensus_29#0 AAAAATTATCCCTTCGATGTCGATCAATGGCGTGGTATGACTTTTGTAACCGTACCAAGA 300
consensus_29#1 ------------------------------------------------------------
consensus_29#0 TACAAAGGTGTACCTTCTTCTTTGAACGTGATATCTGAGAAAATTGGCAACGGTGGACGA 360
consensus_29#1 ------------------------------------------------------------
consensus_29#0 CTTCTACAACCGTATCCTGATTGGTCGTGGGCGAACTATAAAGATTGCTCTGGAATAGTG 420
consensus_29#1 ------------------------------------------------------------
consensus_29#0 AGCGCTTACAAAATTGCGATCGACAAGTTCGACAGATTGTGGATTCTGGACTCAGGTATT 480
consensus_29#1 ------------------------------------------------------------
consensus_29#0 ATCAATAATACTCAACCCATGTGTTCACCAAAATTGCATGTCTTTGATCTCAATACCTCA 540
consensus_29#1 ------------------------------------------------------------
consensus_29#0 CATCAGCTTAAGCAAGTTGTGATGCCGCACGATATTGCCGTAAATGCCAGCACAGGGAAT 600
consensus_29#1 ------------------------------------------------------------
consensus_29#0 GGGGGACTCGTATCACTAGTTGTTCAAGCTATGGATCCTGTGAATACTATCGTGTATATG 660
consensus_29#1 ------------------------------------------------------------
consensus_29#0 GCAGATGACAAAGGTGATGCTTTAATCGTCTACCAAAATTCTGACGAATCTTTCCATCGA 720
consensus_29#1 ------------------------------------------------------------
consensus_29#0 TTGACTTCCAACACTTTCGATTACGATCCCAAATATATCAAAATGATGGCCGCGGGAGAA 780
consensus_29#1 ------------------------------------------------------------
consensus_29#0 AGTTTCACAGCGCAAGATGGAATTTTTGGAATGGCACTCAGTCCCATGACAAACAATCTT 840
consensus_29#1 ------------------------------------------------------------
consensus_29#0 TATTACAGCCCTCTTTCTTCTCGCAGTTTGTATTATGTTAATACAAAACCATTCATGAAA 900
consensus_29#1 ------------------------------------------------------------
consensus_29#0 TCAGAATATGGAGCAAATAACGTACAATATCAAGGTGTCCAAGATATTTTCAACACTGAA 960
consensus_29#1 ------------------------------------------------------------
consensus_29#0 TCGATTGCTAAAATAATGTCGAAAAATGGCGTTCTCTTTTTCGGCCTCATGAATAATTCA 1020
consensus_29#1 ------------------------------------------------------------
consensus_29#0 GCTATTGGTTGTTGGAACGAGCATCAACCACTTCAGAGAGAAAATATGGATATGGTCGCT 1080
consensus_29#1 ------------------------------------------------------------
consensus_29#0 CAGAATGAAGAGACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCC 1140
consensus_29#1 -AGAATGAAGAGACTCTTCAAACGGTCGTTGCTATGAAAATGATGCATCTCCCACAATCC 59
***********************************************************
consensus_29#0 AACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATAGAATGGATAGA 1200
consensus_29#1 AACAAGATGAATAGGATGCATAGGATGAATAGAGTGAATAGAGTGAATAGAATGGATAGA 119
************************************************************
consensus_29#0 ATGGATAGAATAGATAGGATGGATAGGATGGATAGGATGGATACAATGGATACAATGGAT 1260
consensus_29#1 ATGGATAGAATAGATAGGATGGATACAATGGATACAATGGATACAATGGATAGAACAGAT 179
************************* ******* **************** ** ***
consensus_29#0 AGAATAGATAGGATGGATAGGATGGATAGAATAGATAGGATAGATAGGATGGATACAATG 1320
consensus_29#1 AAGATGAGTAGCATGGATAGGATGGATAGAATGGATAGGGTGGATAGGATGGATACAATG 239
* ** *** ******************** ****** * ******************
consensus_29#0 GATACAATGGATACAATGGATAGAACAGATAAGATGAGTAGCATGGATAGGATGGATAGA 1380
consensus_29#1 GATAGAACAGATAAGATGAGTAGCATGGATAG---------------------------- 271
**** ** **** *** *** * ****
consensus_29#0 ATGGATAGGGTGGATAGGATGGATACAATGGATAGAACAGATAAGATGAGTAGCATGGAT 1440
consensus_29#1 ------------------------------------------------------------
consensus_29#0 AGGATGGATAGAATGGATAGGGTGGATACAATGGATACAATGGATACAATGGATAGAATG 1500
consensus_29#1 ------------------------------------------------------------
consensus_29#0 GATAGGATGGATAGGATGGATAGAATGGATAGAATGGATAGGATGGATACAATGGATAGA 1560
consensus_29#1 ------------------------------------------------------------
consensus_29#0 ACAGATAAGATGAGTAGGATAGATAGAATGGATAAAATAGATAGAATGGATAGGATGGAT 1620
consensus_29#1 ------------------------------------------------------------
consensus_29#0 AGGACAAATAGAATGGATAGAATGAATAGGATGAATAGACAAATGAATGAATATATGATG 1680
consensus_29#1 ------------------------------------------------------------
consensus_29#0 GCTTTAAGTATGAAATTACAGAAATTTATAAATAATGATTATAATTTCAACGAAGTAAAC 1740
consensus_29#1 ------------------------------------------------------------
consensus_29#0 TTCCGAATTTTGGGTGCAAATGTAAACGATTTAATAATGAATACTCGTTGTGCAAATTCT 1800
consensus_29#1 ------------------------------------------------------------
consensus_29#0 GACAATCAGAATAACAATCAAAATAAGCATAATAATTAAGATGATCGTTCTTTATATTAA 1860
consensus_29#1 ------------------------------------------------------------
consensus_29#0 AATCTGTTAATCAGTCTTTTCTCGATATAAACCAAATATTCTTTAAAATTTCTTTATATT 1920
consensus_29#1 ------------------------------------------------------------
consensus_29#0 ATAAATGAATAAAATAA 1937
consensus_29#1 -----------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |