These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2943#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 524 fasta sequence [GCAGTGTGATACGAAATACTAGAACATCATTTTATAATCCGTGTAATAAAAATTATAATCTAGTATGTGTACTGCATTAGATCAATGGTTTTATATATATATCTATATAGTTTATCGTGCTTATTTAACGAACGCTTTGTAAAAAAGTGTTTTTTTTTTTTGTATAAGCATTCACATTATTAAAAACATTATTATCAATTAATTTGAAAATTTTATTTCTATATTATATTATCGCAGGTATCGAGTATAATTACGCGAACACGATGCGGCATCTTTTTCAATATTATAAAATAATTATATATGTATAATAATTACCTATAATAGATTCAATAATAAATATTCATTTAAAATATCTCTTAAAAGAGTTTTTTCTTTACAGCGGTATATCTTTCCATATAGTTATCATAACCATCAAGATTAGCAAATTGTTTTATCTCAAATAAATTTCCTTCAACAGACAGGACTGAAATTTTAGAATTTTTCAAAATTTTACTAGGTATTGCATTCAGTTGTAAACAATTTTC] [+] EMBL BE844257 [GCAGTGTGATACGAAATACTAGAACATCATTTTATAATCCGTGTAATAAAAATTATAATCTAGTATGTGTACTGCATTAGATCAATGGTTTTATATATATATCTATATAGTTTATCGTGCTTATTTAACGAACGCTTTGTAAAAAAGTGTTTTTTTTTTTTGTATAAGCATTCACATTATTAAAAACATTATTATCAATTAATTTGAAAATTTTATTTCTATATTATATTATCGCAGGTATCGAGTATAATTACGCGAACACGATGCGGCATCTTTTTCAATATTATAAAATAATTATATATGTATAATAATTACCTATAATAGATTCAATAATAAATATTCATTTAAAATATCTCTTAAAAGAGTTTTTTCTTTACAGCGGTATATCTTTCCATATAGTTATCATAACCATCAAGATTAGCAAATTGTTTTATCTCAAATAAATTTCCTTCAACAGACAGGACTGAAATTTTAGAATTTTTCAAAATTTTACTAGGTATTGCATTCAGTTGTAAACAATTTTC] consensusID : consensus_2943#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 509 fasta sequence [TATTAGCTTTGGCACCATTGCTACGTACATTGGATTTATCGGAAAATGAATTTGTTCATATTCCCGATAATATTGGTAATTTTACGTTATTAAAGCTATTGAATGTTAATCATAACAAATTGACAACTTTACCCGAAGCACTTGGAGCATTGACAAAATTAGAATGTTTAAATGCAAGTTCGAATCAAATAAAAACTATCCCATGGTCATTGTCAAAACTAACACGATTGAAACAAGTCAACTTATCTGATAATCGTATAACCGAATTTCCTCCTATGTTTTGTGATTTAAAATTTCTGGATGTGTTAGATTTATCGAAGAATCGAATTACGACAATCCCTGATGCGGCTGGAGCGTTACATATAGTTGAACTTAACCTCAATCAAAATCAGATATCAACTATATCTGAGAAATTGGCGGAATGTTCGCGCCTAAAAACATTAAGACTTGAAGAAAATTGTTTACAACTGAATGCAATACCTAGTAAAATTTTGAAAAATTCTAAAATT] [+] EMBL BI516269 [TATTAGCTTTGGCACCATTGCTACGTACATTGGATTTATCGGAAAATGAATTTGTTCATATTCCCGATAATATTGGTAATTTTACGTTATTAAAGCTATTGAATGTTAATCATAACAAATTGACAACTTTACCCGAAGCACTTGGAGCATTGACAAAATTAGAATGTTTAAATGCAAGTTCGAATCAAATAAAAACTATCCCATGGTCATTGTCAAAACTAACACGATTGAAACAAGTCAACTTATCTGATAATCGTATAACCGAATTTCCTCCTATGTTTTGTGATTTAAAATTTCTGGATGTGTTAGATTTATCGAAGAATCGAATTACGACAATCCCTGATGCGGCTGGAGCGTTACATATAGTTGAACTTAACCTCAATCAAAATCAGATATCAACTATATCTGAGAAATTGGCGGAATGTTCGCGCCTAAAAACATTAAGACTTGAAGAAAATTGTTTACAACTGAATGCAATACCTAGTAAAATTTTGAAAAATTCTAAAATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2943#0 GCAGTGTGATACGAAATACTAGAACATCA-TTTTATAATCCGTGTAATAAAAATTATAAT 59 consensus_2943#1 ------------------------TATTAGCTTTGGCACCATTGCTACGTACATTGGATT 36 ** * *** * * ** * * *** * * consensus_2943#0 C--TAGTATGTGTACTGCATTAGATCAATGGTTTTATATATATATCTATATAGTTTATCG 117 consensus_2943#1 TATCGGAAAATGAATTTGTTCATATTCCCGATAATATTGGTAATTTTACGT----TATTA 92 * * ** * * * * ** * * *** ** * ** * *** consensus_2943#0 TGCTTATTTAACGAACGCTTTGTAAAAAAGTGTTTTTTTTTTTTGTATAAGCATTCACAT 177 consensus_2943#1 AAGCTATTGAATGTTAA--TCATAACAAATTGACAACTTTACCCG---AAGCACTTGGAG 147 **** ** * * *** *** ** *** * ***** * * consensus_2943#0 TATTAAAAACATTATTATCAATTAATTTGAAAATTTTATTTCTATATTATATTATCGCAG 237 consensus_2943#1 CATTGACAAAATTAGAAT--GTTTAAATGCAAGTTCGAATCAAATAA-AAACTATCCCAT 204 *** * ** **** ** ** * ** ** ** * * *** * * **** ** consensus_2943#0 G--TATCGAGTATAATTACGCGAACACGATGCGGCATCTTTTTCAATATTATAAAATAAT 295 consensus_2943#1 GGTCATTGTCAAAACTAACACGATTGAAACAAGTCAACTTATCTGATA--ATCGTATAAC 262 * ** * * * * ** *** * * ** *** * *** ** **** consensus_2943#0 TATATATG-TATAATAATTACCTATAATAGATTCAATAATAAATATTCATTTAAAATATC 354 consensus_2943#1 CGAATTTCCTCCTATGTTTTGTGATTTAAAATTTCTGGATGTGT-TAGATTTATCGAAGA 321 ** * * ** ** ** * *** ** * * ***** * consensus_2943#0 TCTTAAAAGAGTTTTTTCTTTACAGCGGTATATCTTTCCATATAGTT-ATCATAACC--- 410 consensus_2943#1 ATCGAATTACGACAATCCCTGATGCGGCTGGAGCGTTACATATAGTTGAACTTAACCTCA 381 ** * * * * * * * * * ** ********* * * ***** consensus_2943#0 ATCAAGATTAGCAAATTGTTTTATCTCAAATA------AATTTCCTTCAACAGACAGGAC 464 consensus_2943#1 ATCAAAATCAGATATCAACTATATCTGAGAAATTGGCGGAATGTTCGCGCCTAAAAACAT 441 ***** ** ** * * ***** * * * * * * * * * * consensus_2943#0 TGAAATTTTAG---AATTTTTCAAAATTTTACTAGGTATTGCATTCAGTTGTAAACAATT 521 consensus_2943#1 TAAGACTTGAAGAAAATTGTTTACAACTGAATGCAATACCTAGTAAAATTTTGAAAAATT 501 * * * ** * **** ** * ** * * ** * * ** * ** **** consensus_2943#0 TTC----- 524 consensus_2943#1 CTAAAATT 509 * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |