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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_315#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1002 fasta sequence
[GTACATTAAGTACCTATATTTCCACCATTTTACTGGATTTCCGGGCTATCGATCGACGCTTCGCCAATTATGAAAGCCGGTGGCAGATAATGACAGCGTGTCAGAAATGCACATTTAGTTTGCGAATAAGTTTATTAAAAGCGTGCATGTCTTTATATGTAAAAGAAAAAGAAAATGGATAAAAATTATGATTAATTCAAACTTGTTAAAACAGAAGTTATACTGGAAATTAATGAAAAGACATTGTGTTATAATACTAATTTACTGCTAAACGAGGAAAATGATAAAAGAAATTAAAGAATTAAATTTTGGTAAATAAGTCTTTCTTTTCAAATAAGAGTCCTAGAAGTTATACAGATTGTTTTTTTGGAAATATATTGAGTGCAATATTTGACATACATTAAATATATGAAGCTAGTTTTTCATGGAGTTTCATCCCAAACATTTTTGAAAATATTCGAGTTTATTCCATTGTCAATGGATTATATTATAATACTAATGCAAAGGGGAAGTGAGAGTGTGCATTTTAGTTCTCACAGTTTNCCTCAAAACATACCAAACAAAAAAGATACAGTAAAAATATAATGTACACACGCGCGCGCGCGTGCGCGCACACACATACACACACCACACACAGAAAATATATGTGTGTCATTATAGATATTCAAAATATATATACATATATATTTATATGTATATACAGCATAAAACTGAAAGATTGTACTGTATCAGAATATGTAATATTTTGTGTTATGATTGGAATTTATTGTAATTCAAAAGTATTTTGAGAGAGTATCCTTTCTAGCGACGAGTCGGAACTTAACTGGTTAAAATTAAGCAAGTAATATATTTATTGAAGTTAAAGTGTGGTAAATTTTAGAAATGTTGGAATTATGTTTCATATAACGAGTTACTGATTTATTTCACATGTGCAGTCATATAATGTGAAATGATATATTGTGAACACTAAAATAGATACTGAAAAATTATATTATAAATTTG]
[+] EMBL BI504109 [GTACATTAAGTACCTATATTTCCACCATTTTACTGGATTTCCGGGCTATCGATCGACGCTTCGCCAATTATGAAAGCCGGTGGCAGATAATGACAGCGTGTCAGAAATGCACATTTAGTTTGCGAATAAGTTTATTAAAAGCGTGCATGTCTTTATATGTAAAAGAAAAAGAAAATGGATAAAAATTATGATTAATTCAAACTTGTTAAAACAGAAGTTATACTGGAAATTAATGAAAAGACATTGTGTTATAATACTAATTTACTGCTAAACGAGGAAAATGATAAAAGAAATTAAAGAATTAAATTTTGGTAAATAAGTCTTTCTTTTCAAATAAGAGTCCTAGAAGTTATACAGATTGTTTTTTTGGAAATATATTGAGTGCAATATTTGACATACATTAAATATATGAAGCTAGTTTTTCATAGAGTTTCATCCCAAACATTTTTGAAAATATTCGAGTTTATTCCATTGTCAATGGATTATATTATAATACTAATGCAAAGGGGAAGTGAGAGTGTGCATTTTAGTTCTCACAGTTTNCCTCAAAACATACCAAACAAAAAAGATACAGTAAAAATATAATGTACACACGCGCGCGCGCGTGCGCGCACACACAT ]
[+] EMBL BI510392 [ TATATTGAGTGCAATATTTGACATACATTAAATATATGAAGCTAGTTTTTCATGGAGTTTCATCCCAAACATTTTTGAAAATATTCGAGTTTATTCCATTGTCAATGGATTATATTATAATACTAATGCAAAGGGGAAGTGAGAGTGTGCATTTTAGTTCTCACAGTTTGCCTCAAAACATACCAAACAAAAAAGATACAGTAAAAATATAATGTACACACGCGCGCGCGCGTGCGCGCACACACATACACACACCACACACAGAAAATATATGTGTGTCATTATAGATATTCAAAATATATATACATATATATTTATATGTATATACAGCATAAAACTGAAAGATTGTACTGTATCAGAATATGTAATATTTTGTGTTATGATTGGAATTTATTGTAATTCAAAAGTATTTTGAGAGAGTATCCTTTCTAGCGACGAGTCGGAACTTAACTGGTTAAAATTAAGCAAGTAATATATTTATTGAAGTTAAAGTGTGGTAAATTTTAGAAATGTTGGAATTATGTTTCATATAACGAGTTACTGATTTATTTCACATGTGCAGTCATATAATGTGAAATGATATATTGTGAACACTAAAATAGATACTGAAAAATTATATTATAAATTTG]
consensusID : consensus_315#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 672 fasta sequence
[TCTTATATTTTTCTTTCTTACTCCAATTACTTTCTTCTACGGCAAATACAAGTTATTTCATTTCTTTGCGCTTTATAAGTAACCGTTGTAACTTAGTAACTCTTAGTTCGAGGAATTATTTAGAAAGCTTTTTAAGTAACAATATATTTTTTTTTTTTATATATCGCCACAAGCTAAATACGTTCGATAATTTTAATACATTCGAATAGAGCAGGCTAAACATTTACTGGCCCATTTTTTCTATTTTTCATAATATCGTGCAATTGGAGTTTTTTTAATACAGTGAGCGAAATATTTGTTCCACTATTTCGCGGATTAATGGTCGATTAACTTAGGCTGAGACAATCTAAAGTGATAACCTTTTTTTTTTTTTATTGTTGTTTATAGATTTTTGTCATAGGTGTCGTCCAATAAGTACGGAACGTGTTACATGTATGTATATATATACGCGTGTCTAGGAGGACAAAAAACCGAATGGAAAAAAAAAAAAAAAAAAATTTCGTGTTTCGAAATTTCAATTTGTATCGATATTATTTTCAAGACCTAAAAATTTAGTTAGGAATGTAAGGAAAGGGTGTAAAGGAAGTTGGAAAGAAAAAAGCGCATTCGTAAAAGGAATACAAAGAGAAACAAATGAAGAGGGTGTGTGTCTAAGTGCTTATCAAGGATAAG]
[+] EMBL BI514524 [TCTTATATTTTTCTTTCTTACTCCAATTACTTTCTTCTACGGCAAATACAAGTTATTTCATTTCTTTGCGCTTTATAAGTAACCGTTGTAACTTAGTAACTCTTAGTTCGAGGAATTATTTAGAAAGCTTTTTAAGTAACAATATATTTTTTTTTTTTATATATCGCCACAAGCTAAATACGTTCGATAATTTTAATACATTCGAATAGAGCAGGCTAAACATTTACTGGCCCATTTTTTCTATTTTTCATAATATCGTGCAATTGGAGTTTTTTTAATACAGTGAGCGAAATATTTGTTCCACTATTTCGCGGATTAATGGTCGATTAACTTAGGCTGAGACAATCTAAAGTGATAACCT ]
[+] EMBL BI514272 [ TTTAATACAGTGAGCGAAATATTTGTTCCACTATTTCGCGGATTAATGGTCGATTAACTTAGGCTGAGACAATCTAAAGTGATAACCTTTTTTTTTTTTTATTGTTGTTTATAGATTTTTGTCATAGGTGTCGTCCAATAAGTACGGAACGTGTTACATGTATGTATATATATACGCGTGTCTAGGAGGACAAAAAACCGAATGGAAAAAAAAAAAAAAAAAAATTTCGTGTTTCGAAATTTCAATTTGTATCGATATTATTTTCAAGACCTAAAAATTTAGTTAGGAATGTAAGGAAAGGGTGTAAAGGAAGTTGGAAAGAAAAAAGCGCATTCGTAAAAGGAATACAAAGAGAAACAAATGAAGAGGGTGTGTGTCTAAGTGCTTATCAAGGATAAG]
consensusID : consensus_315#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 515 fasta sequence
[ATCGTGCAATTGGAGTTTTTTTAATACAGTGAGCGAAATATTTGTTCCACTATTTCGCGGATTAATGGTCGATTAACTTAGGCTGAGACAATCTAAAGTGATAACCTTTTTTTTTTTTTATTGTTGTTTATAGATTTTTGTCATAGGATTATATTATAATACTAATGCAAAGGGGAAGTGAGAGTGTGCATTTTAGTTCTCACAGTTTGCCTCAAAACATACCAAACAAAAAAGATACAGTAAAAATATAATGTACACACGCGCGCGCGCGTGCGCGCACACACATACACACACCACACACAGAAAATATATGTGTGTCATTATAGATATTCAAAATATATATACATATATATTTATATGTATATACAGCATAAAACTGAAAGATTGTACTGTATCAGAATATGTAATATTTTGTGTTATGATTGGAATTTATTGTAATTCAAAAGTATTTTGAGAGAGTATCCTTTCTAGCGACGAGTCGGAACTTAACTGGTTAAAATTAAGCAAGTAATATA]
[+] EMBL BI506938 [ATCGTGCAATTGGAGTTTTTTTAATACAGTGAGCGAAATATTTGTTCCACTATTTCGCGGATTAATGGTCGATTAACTTAGGCTGAGACAATCTAAAGTGATAACCTTTTTTTTTTTTTATTGTTGTTTATAGATTTTTGTCATAGGATTATATTATAATACTAATGCAAAGGGGAAGTGAGAGTGTGCATTTTAGTTCTCACAGTTTGCCTCAAAACATACCAAACAAAAAAGATACAGTAAAAATATAATGTACACACGCGCGCGCGCGTGCGCGCACACACATACACACACCACACACAGAAAATATATGTGTGTCATTATAGATATTCAAAATATATATACATATATATTTATATGTATATACAGCATAAAACTGAAAGATTGTACTGTATCAGAATATGTAATATTTTGTGTTATGATTGGAATTTATTGTAATTCAAAAGTATTTTGAGAGAGTATCCTTTCTAGCGACGAGTCGGAACTTAACTGGTTAAAATTAAGCAAGTAATATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_315#0 GTACATTAAGTACCTATATTTCCACCATTTTACTGGATTTCCGGGCTATCGATCGACGCT 60
consensus_315#2 ------------------------------------------------------------
consensus_315#1 ------------------------------------------------------------
consensus_315#0 TCGCCAATTATGAAAGCCGGTGGCAGATAATGACAGCGTGTCAGAAATGCACATTTAGTT 120
consensus_315#2 ------------------------------------------------------------
consensus_315#1 ----------TCTTATATTTTTCTTTCTTACTCCAATTACTTTCTTCTACGGCAAATACA 50
consensus_315#0 TGCGAATAAGTTTATTAAAAGCGTGCATGTCTTTATATGTAAAAGAAAAAGAAAATGGAT 180
consensus_315#2 ------------------------------------------------------------
consensus_315#1 AGTTATTTCATTTCTTTGCGCTTTATAAGTAACCGTTGTAACTTAGTAACTCTTAGTTCG 110
consensus_315#0 AAAAATTATGATTAATTCAAACTTGTTAAAACAGAAGTTATACTGGAAATTAATGAAAAG 240
consensus_315#2 ------------------------------------------------------------
consensus_315#1 AGGAATTATTTAGAAAGCTTTTTAAGTAACAATATATTTTTTTTTTTTATATATCGCCAC 170
consensus_315#0 ACATTGTGTTATAATACTAATTTACTGCTAAACGAGGAAAATGATAAAAGAAATTAAAGA 300
consensus_315#2 ------------------------------------------------------------
consensus_315#1 AAGCTAAATACGTTCGATAATTTTAATACATTCGAATAGAGCAGGCTAA-ACATTTACTG 229
consensus_315#0 ATTAAATTTTGGTAAATAAGTCTTTCTTTTCAAATAAGAGTCCTAGAAGTTATACAGATT 360
consensus_315#2 -------------------------ATCGTGCAATTGGAGTTTTTT---TAATACAG--- 29
consensus_315#1 GCCCATTTTTTCTATTTTTCATAATATCGTGCAATTGGAGTTTTTT---TAATACAG--- 283
* * *** **** * * ******
consensus_315#0 GTTTTTTTGGAAATATATTGAGTGCAATATTTGACATACATTAAATATATGAAGCTAGTT 420
consensus_315#2 ------TGAGCGAAATATTTGTTCCACTATTTCGCGGATTAATGGTCGATTAACTTAGGC 83
consensus_315#1 ------TGAGCGAAATATTTGTTCCACTATTTCGCGGATTAATGGTCGATTAACTTAGGC 337
* * * ***** * ** ***** * * * ** ** ***
consensus_315#0 TTTCATGGAGTTTCATCCCAAACATTTTTGAAAAT-ATTCGAGTTTATT--CCATTGTCA 477
consensus_315#2 TGAGACAATCTAAAGTGATAACCTTTTTTTTTTTTTATTGTTGTTTATAGATTTTTGTCA 143
consensus_315#1 TGAGACAATCTAAAGTGATAACCTTTTTTTTTTTTTATTGTTGTTTATAGATTTTTGTCA 397
* * * * ** * ***** * *** ****** ******
consensus_315#0 ATGGATTATATTATAATACTAATGCAAAGGGGAAGTGAGAGTGTGCATTTTAGTTCTCAC 537
consensus_315#2 TAGGATTATATTATAATACTAATGCAAAGGGGAAGTGAGAGTGTGCATTTTAGTTCTCAC 203
consensus_315#1 TAGG--TGTCGTCCAATAAGTACGGAACGTGT---TACATGTATGTATATATATACGCGT 452
** * * * **** * * ** * * * ** ** ** * * * *
consensus_315#0 AGTTTNCCTCAAAACATACCAAACAAAAAAGATACAGTAAAAATATAATGTACACACGCG 597
consensus_315#2 AGTTTGCCTCAAAACATACCAAACAAAAAAGATACAGTAAAAATATAATGTACACACGCG 263
consensus_315#1 GTCTAGGAGGACAAAAAACCGAATGGAAAAAAAAAAAAAAAAAAATTTCGTGTTTCGAAA 512
* * ** * *** ** **** * * * ***** ** **
consensus_315#0 CGCGCGCGTGCGCGCACACACATACACACACCACACACAGAAAATATATGTGTGTCATTA 657
consensus_315#2 CGCGCGCGTGCGCGCACACACATACACACACCACACACAGAAAATATATGTGTGTCATTA 323
consensus_315#1 TTTCAATTTGTATCGATAT-TATTTTCAAGACCTAAAAATTTAGT-TAGGAATGTAAGGA 570
** * * ** ** * * * * * * ** * *** * *
consensus_315#0 TAGATATTCAAAATATATATACATATATATTTATATGTATATACAGCATAAAACTGAAAG 717
consensus_315#2 TAGATATTCAAAATATATATACATATATATTTATATGTATATACAGCATAAAACTGAAAG 383
consensus_315#1 AAGGGTGTAAAGGAAGTTGGAAAGAAAAAAGCGCATTCGTAAAAGGAATACAA--AGAGA 628
** * ** * * * * * * * ** ** * * *** ** *
consensus_315#0 ATTGTACTGTATCAGAATATGTAATATTTTGTGTTATGATTGGAATTTATTGTAATTCAA 777
consensus_315#2 ATTGTACTGTATCAGAATATGTAATATTTTGTGTTATGATTGGAATTTATTGTAATTCAA 443
consensus_315#1 AACAAATGAAGAGGGTGTGTGTCTAAGTGCTTATCAAGGATAAG---------------- 672
* * * * *** * * * * * * *
consensus_315#0 AAGTATTTTGAGAGAGTATCCTTTCTAGCGACGAGTCGGAACTTAACTGGTTAAAATTAA 837
consensus_315#2 AAGTATTTTGAGAGAGTATCCTTTCTAGCGACGAGTCGGAACTTAACTGGTTAAAATTAA 503
consensus_315#1 ------------------------------------------------------------
consensus_315#0 GCAAGTAATATATTTATTGAAGTTAAAGTGTGGTAAATTTTAGAAATGTTGGAATTATGT 897
consensus_315#2 GCAAGTAATATA------------------------------------------------ 515
consensus_315#1 ------------------------------------------------------------
consensus_315#0 TTCATATAACGAGTTACTGATTTATTTCACATGTGCAGTCATATAATGTGAAATGATATA 957
consensus_315#2 ------------------------------------------------------------
consensus_315#1 ------------------------------------------------------------
consensus_315#0 TTGTGAACACTAAAATAGATACTGAAAAATTATATTATAAATTTG 1002
consensus_315#2 ---------------------------------------------
consensus_315#1 ---------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |