These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_336#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 785 fasta sequence [TAAGACAACGTCAAAAGAAAGCCCATATAATGGAAATTCAATTAAATGGTGGAACTATTGAGCAGAAAGTTCAATGGGCTCGTGAACATTTAGAAAAACCAGTACCTGTCAGTAATGTTTTTGCTCCAGATGAAATGATAGATGTAATTGGTGTCACAAAAGGAAAAGGATATAAAGGTGTTACATCGCGTTGGCATACAAAAAAATTGCCACGCAAAACACATAAAGGTCTAAGAAAAGTCGCTTGTATTGGAGCTTGGCATCCTAGCCGTGTGTCTTTTACTGTTGCACGTGCTGGTCAAAAGGGATATCATCATCGTACAGAAATGAATAAAAAAATTTATAGAATTGGACAAGGAATTCATACTAAAGATGGCAAGATCGTAAAGAATAATGCTTCTACAGAATACGATCTTACCGAGAAAACTATAACTCCTATGGGAGGTTTTCCTCATTATGGTGAAGTAAATAATGACTTCATTATGATCAAAGGTTGCTGTATGGGTCCGAAAAAACGTGTAATTACATTACGTAAGTCCTTATTAGTTCATACTAAACGATCAGCATTGGAGAAGATCAATCTTAAATTTATCGATACAAGTTCCAAATTTGGACATGGTCGTTTTCAAACTGCTGCTGATAAGNCTTCATTTATGGGTCAACTTAAAAAAGATCGTATGCGTGAGGAACAACAAGCACAAGCTACTACCTCAGCACCATCGGCCGCAAATGCTTAATAAAAACATATACATATTAAAATATGTATAAAATGAAAAATAAAAAAT] [+] EMBL BI503462 [TAAGACAACGTCAAAAGAAAGCCCATATAATGGAAATTCAATTAAATGGTGGAACTATTGAGCAGAAAGTTCAATGGGCTCGTGAACATTTAGAAAAACCAGTACCTGTCAGTAATGTTTTTGCTCCAGATGAAATGATAGATGTAATTGGTGTCACAAAAGGAAAAGGATATAAAGGTGTTACATCGCGTTGGCATACAAAAAAATTGCCACGCAAAACACATAAAGGTCTAAGAAAAGTCGCTTGTATTGGAGCTTGGCATCCTAGCCGTGTGTCTTTTACTGTTGCACGTGCTGGTCAAAAGGGATATCATCATCGTACAGAAATGAATAAAAAAATTTATAGAATTGGACAAGGAATTCATACTAAAGATGGCAAGATCGTAAAGAATAATGCTTCTACAGAATACGATCTTACCGAGAAAACTATAACTCCTATGGGAGGTTTTCCTCATTATGGTGAAGTAAATAATGACTTCATTATGATCAAAGGTTGCTGTATGGGTCCGAAAAAACGTGTAATTACATTACGTAAGTCCTTATTAGTTCATACTAAA ] [+] EMBL BI514151 [ TGGAGCTTGGCATCCTAGCCGTGTGTCTTTTACTGTTGCACGTGCTGGTCAAAAGGGATATCATCATCGTACAGAAATGAATAAAAAAATTTATAGAATTGGACAAGGAATTCATACTAAAGATGGCAAGATCGTAAAGAATAATGCTTCTACAGAATACGATCTTACCGAGAAAACTATAACTCCTATGGGAGGTTTTCCTCATTATGGTGAAGTAAATAATGACTTCATTATGATCAAAGGTTGCTGTATGGGTCCGAAAAAACGTGTAATTACATTACGTAAGTCCTTATTAGTTCATACTAAACGATCAGCATTGGAGAAGATCAATCTTAAATTTATCGATACAAGTTCCAAATTTGGACATGGTCGTTTTCAAACTGCTGCTGATAAGNCTTCATTTAT ] [+] EMBL BI510985 [ GTGTCTTTTACTGTTGCACGTGCTGGTCAAAAGGGATATCATCATCGTACAGAAATGAATAAAAAAATTTATAGAATTGGACAAGGAATTCATACTAAAGATGGCAAGATCGTAAAGAATAATGCTTCTACAGAATACGATCTTACCGAGAAAACTATAACTCCTATGGGAGGTTTTCCTCATTATGGTGAAGTAAATAATGACTTCATTATGATCAAAGGTTGCTGTATGGGTCCGAAAAAACGTGTAATTACATTACGTAAGTCCTTATTAGTTCATACTAAACGATCAGCATTGGAGAAGATCAATCTTAAATTTATCGATACAAGTTCCAAATTTGGACATGGTCGTTTTCAAACTGCTGCTGATAAGACTTCATTTATGGGTCAACTTAAAAAAGATCGTATGCGTGAGGAACAACAAGCACAAGCTACTACCTCAGCACCATCGGCCGCAAATGCTTAATAAAAACATATACATATTAAAATATGTATAAAATGAAAAATAAAAAAT] consensusID : consensus_336#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 549 fasta sequence [AAGCTTTTCCTAAAGATGATCCAAGCAAACCTGTACATTTAACGGCTTTTATCGGTTATAAAGCCGGTATGACTCACGTAGTTAGGGAAGCTGATCGTCCAGGATCAAAGGTGAATAAGAAAGAAATTGTAGAAGCAGTTACCATTTTAGAAACACCACCTATGATTGTAGTTGGTGTAGTTGGTTATATTGAAACTCCGCATGGTTTACGTGCTCTTACTACAGTATGGGCAGAACATTTATCTGAAGATTGTCGAAGAAGATTTTATAAAAACTGGTACAAAAGCAAAAAGAAGGCATTTACAAAAGCTTCCAAAAAATGGCAAGATGATCTTGGTCGTAAATCTATAGAAAACGATTTTAAAAAAATCATTAAATATTGTAAAGTTGTACGAATTATCGCTCATACGCAGATGAAATTATTAAGACAACGTCAAAAGAAAGCCCATATAATGGAAATTCAATTAAATGGTGGAACTATTGAGCTGAAAGTTCAATGGGCTCGTGAACATTTAGAAAAACCAGTACCTGTCAGTAATGTTTTTGCTC] [+] EMBL BI505312 [AAGCTTTTCCTAAAGATGATCCAAGCAAACCTGTACATTTAACGGCTTTTATCGGTTATAAAGCCGGTATGACTCACGTAGTTAGGGAAGCTGATCGTCCAGGATCAAAGGTGAATAAGAAAGAAATTGTAGAAGCAGTTACCATTTTAGAAACACCACCTATGATTGTAGTTGGTGTAGTTGGTTATATTGAAACTCCGCATGGTTTACGTGCTCTTACTACAGTATGGGCAGAACATTTATCTGAAGA ] [+] EMBL BI510465 [ GCAAACCTGTACATTTAACGGCTTTTATCGGTTATAAAGCCGGTATGACTCACGTAGTTAGGGAAGCTGATCGTCCAGGATCAAAGGTGAATAAGAAAGAAATTGTAGAAGCAGTTACCATTTTAGAAACACCACCTATGATTGTAGTTGGTGTAGTTGGTTATATTGAAACTCCGCATGGTTTACGTGCTCTTACTACAGTATGGGCAGAACATTTATCTGAAGATTGTCGAAGAAGATTTTATAAAAACTGGTACAAAAGCAAAAAGAAGGCATTTACAAAAGCTTCCAAAAAATGGCAAGATGATCTTGGTCGTAAATCTATAGAAAACGATTTTAAAAAAATCATTAAATATTGTAAAGTTGTACGAATTATCGCTCATACGCAGATGAAATTATTAAGACAACGTCAAAAGAAAGCCCATATAATGGAAATTCAATTAAATGGTGGAACTATTGAGCTGAAAGTTCAATGGGCTCGTGAACATTTAGAAAAACCAGTACCTGTCAGTAATGTTTTTGCTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_336#0 TAAGACAACGTCAAAAGAAAGCCCATATAATGGAAATTCAATTAAATGGTGGAACTATTG 60 consensus_336#1 ---------------------------------------------------AAGCTTTTC 9 * ** ** consensus_336#0 AGCAGAAAGTTCAATGGGCTCGTGAACATTTAGAAAAACCAGTACCTGTCAGTAATGTTT 120 consensus_336#1 CTAAAGATGATCCAAGCAAACCTGTACATTTAA------CGGCTTTTATCGGTTATAAAG 63 * * * ** * * * ** ******* * * * ** ** ** consensus_336#0 TTGCTCCAGATGAAATGATAGATGTAATTGGTGTCACAAAAGGAAAAGGATATAAAGGTG 180 consensus_336#1 CCGGTATGACTCACGTAGTTAGGGAAGCTGATCGTCCAGGATCAAAGGTGAATAAGAAAG 123 * * * * * * * * ** * ** * *** * **** * consensus_336#0 TTACATCGCGTTGGCATACAAAAAAATTGCCACGCAAAACACATAAAGGTC-TAAGAAAA 239 consensus_336#1 --AAATTGTAGAAGCAGTTACCA--TTTTAGAAACACCACCTATGATTGTAGTTGGTGTA 179 * ** * *** * * ** * ** ** ** * ** * * * consensus_336#0 GTCGCTTGTATTGGAGCTTGGCATCCTAGCCGTGTGTCTTTTACTGTTGCACGTGCTGGT 299 consensus_336#1 GTTGGTTATATTGAAACTCCGCATGGTTTACGTG---CTCTTACTACAGTATGGGCAGAA 236 ** * ** ***** * ** **** * **** ** ***** * * * ** * consensus_336#0 CAAAAGGGATATCATCATCGTACAGAAATGAATAAAAAAATTTATAGAATTGGACA--AG 357 consensus_336#1 CATTTATCTGAAGATTGTCGAAGAAGATTTTATAAAAACTGGTACAAAAGCAAAAAGAAG 296 ** * ** *** * * * * ******* ** * ** * * ** consensus_336#0 GAATTCATA--------CTAAAGATGGCAAGATCGTAAAGAATAATGCTTCTACAGAATA 409 consensus_336#1 GCATTTACAAAAGCTTCCAAAAAATGGCAAGATGATCTTGG-TCGTAAATCTATAGAAAA 355 * *** * * * *** ********** * * * * **** **** * consensus_336#0 CGATCTTACCGAGAAAACTATAACTCCTATGGGAGGTTTTCCTCATTATGGTGAAGTAAA 469 consensus_336#1 CGATTTTA---AAAAAATCATTAAATAT-TGTAAAGTTGTACGAATTATCGCTCATACGC 411 **** *** * **** ** * * ** * *** * * ***** * * consensus_336#0 TAATGACTTCATTATGATCAAAGGTTGCTGTATGGGTCCGAAAA--AACGTGTAATTACA 527 consensus_336#1 AGATGAAATTATTAAGAC--AACGTCAAAAGAAAGCCCATATAATGGAAATTCAATTAAA 469 **** * **** ** ** ** * * * * ** * * ***** * consensus_336#0 TTACGTAAGTCCTTATT----AGTTCATACTAAACGATCAGCATTGGAGAAGATCAATCT 583 consensus_336#1 TGGTGGAACTATTGAGCTGAAAGTTCA-ATGGGCTCGTGAACATTTAGAAAAACCAGT-- 526 * * ** * * * ****** * * * **** ** * ** * consensus_336#0 TAAATTTATCGATACAAGTTCCAAATTTGGACATGGTCGTTTTCAAACTGCTGCTGATAA 643 consensus_336#1 ---ACCTGTCAGTA-ATGTTTTTGCTC--------------------------------- 549 * * ** ** * *** * consensus_336#0 GNCTTCATTTATGGGTCAACTTAAAAAAGATCGTATGCGTGAGGAACAACAAGCACAAGC 703 consensus_336#1 ------------------------------------------------------------ consensus_336#0 TACTACCTCAGCACCATCGGCCGCAAATGCTTAATAAAAACATATACATATTAAAATATG 763 consensus_336#1 ------------------------------------------------------------ consensus_336#0 TATAAAATGAAAAATAAAAAAT 785 consensus_336#1 ---------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |