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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_339#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1131 fasta sequence
[AAAATATTTTTCGTTCCATTTAAATAGCAAGATAACTTGAATTAAAATCGATGATGAGGGAAGAGCGAAGACGAAGAAGGATGCTGCGGTAACTGCGAGGCGTCATTATCGTTCCGCGTCTCTCCCTCCCCTTCTCCCCCCCGTGTCACGGAAGCGTTCAGGATGCAAAGTAGCATTTGTACGTATCCTGCGGTGGGACATCGTCAGCTGTTAACTTTTCGAGTTAGCGGAGCAGATAAGGGCCCATGGGCGGTGGCGGAATAGCACTTTGCCTCCGAGTTACACCGCGATAGGCGTAGCGTCAAACTTTCGCTACGCCGCACTGTGAAACCGAATTAGAATCGAAGAGGTCTCCAAGAGCGTTCGATAAAAGTCGATCAGGAGGAGATTCGAATCGTTCTATCTATTCAGTCACTTTCTGGCTCTTTCACAGTGAATACCTACAAGAAAAATGAAAACCATCCTTACGATTATCTTTAGTATTATACTGATTTCGGAGGCCAAAGTTGCTCCGACTAGCACTACCAATTCTCAAGGAACTCCTGATGTTCAACTAAGCGAACTTATAAGCCAGGCTCAAGCAAACATCAACAATTTAGCAAAACAAATTCAGGAACAATGGAATATCCCTGATCAAGACACTATTGTAAAAACTGTCAAAGATCAAAGCGCCAATTTCGTTAACAATATTCAAGATTACATAAAGAATGTTACTGAAGAGGTCAAAACCAAAACTCCCGAATTGGAAAGATCATGGAATGATGTTAAAACCATGCTCAATAAAGTCGTCGATGATATTAGTAGTGGAATTCCAAATGCTCAGCAACAAGTCGCTGAATTACAAAGTAAATTCCAGCAAGGAGTTCAAACTTTACTTAAAGAATCTGACAAAGCTGCGAAATCTCTGAGCCAACATTCTGGAAAAATACAAGAAGACCTTGCAAAGTTCACAAAACAGGCAGTTGATATTGCCGTACAAGCAACGCAGAATCTAAACAATCAACTTCAAACTGCCGCAACTCAAAAAAGTTAAATAACTAGTATTAATATTTCTTATTAAGATTGAAAATATTAATTATATAAAGAAAAATAAAAAAATATAAAAAATTGTTAATATAAAAAAAAAAAAAA]
[+] EMBL BI505274 [AAAATATTTTTCGTTCCATTTAAATAGCAAGATAACTTGAATTAAAATCGATGATGAGGGAAGAGCGAAGACGAAGAAGGATGCTGCGGTAACTGCGAGGCGTCATTATCGTTCCGCGTCTCTCCCTCCCCTTCTCCCCCCCGTGTCACGGAAGCGTTCAGGATGCAAAGTAGCATTTGTACGTATCCTGCGGTGGGACATCGTCAGCTGTTAACTTTTCGAGTTAGCGGAGCAGATAAGGGCCCATGGGCGGTGGCGGAATAGCACTTTGCCTCCGAGTTACACCGCGATAGGCGTAGCGTCAAACTTTCGCTACGCCGCACTGTGAAACCGAATTAGAATCGAAGAGGTCTCCAAGAGCGTTCGATAAAAGTCGATCAGGAGGAGATTCGAATCGTTCTATCTATTCAGTCACTTTCTGGCTCTTTCACAGTGAATACCTACAAGAAAAATGAAAACCATCCTTACGATTATCTTTAGTATTATACTGATTTCGGAGGCCAAAGTTGCTCCGACTAGCACTACCAATTCTCAAGGAACTCCTGATGTTCAACTAAGCGAACTTATAAGCCAGACTCAAGCAAACATCAACAATTTAGCAAAACAAATTCAGGAACAATGGA ]
[+] EMBL BI504226 [ CTCCGACTAGCACTACCAATTCTCAAGGAACTCCTGATGTTCAACTAAGCGAACTTATAAGCCAGGCTCAAGCAAACATCAACAATTTAGCAAAACAAATTCAGGAACAATGGAATATCCCTGATCAAGACACTATTGTAAAAACTGTCAAAGATCAAAGCGCCAATTTCGTTAACAATATTCAAGATTACATAAAGAATGTTACTGAAGAGGTCAAAACCAAAACTCCCGAATTGGAAAGATCATGGAATGATGTTAAAACCATGCTCAATAAAGTCGTCGATGATATTAGTAGTGGAATTCCAAATGCTCAGCAACAAGTCGCTGAATTACAAAGTAAATTCCAGCAAGGAGTTCAAACTTTACTTAAAGAATCTGACAAAGCTGCGAAATCTCTGAGCCAACATTCTGGAAAAATACAAGAAGACCTTGCAAAGTTCACAAAACAGGCAGTTGATATTGCCGTACAAGCAACGCAGAATCTAAACAATCAACTTCAAACTNNCGCAACTCAAAAAAGTTAAATAACTAGTATTAATATTTCTTATTAAGATTGAAAATATTAATTATATAAAGAAAAATAAAAAAATATAAAAAATTGTTAATATAAAAAAAA ]
[+] EMBL BI503366 [ CAAGGAACTCCTGATGTTCAACTAAGCGAACTTATAAGCCAGGCTCAAGCAAACATCAACAATTTAGCAAAACAAATTCAGGAACAATGGAATATCCCTGATCAAGACACTATTGTAAAAACTGTCAAAGATCAAAGCGCCAATTTCGTTAACAATATTCAAGATTACATAAAGAATGTTACTGAAGAGGTCAAAACCAAAACTCCCGAATTGGAAAGATCATGGAATGATGTTAAAACCATGCTCAATAAAGTCGTCGATGATATTAGTAGTGGAATTCCAAATGCTCAGCAACAAGTCGCTGAATTACAAAGTAAATTCCAGCAAGGAGTTCAAACTTTACTTAAAGAATCTGACAAAGCTGCGAAATCTCTGAGCCAACATTCTGGAAAAATACAAGAAGACCTTGCAAAGTTCACAAAACAGGCAGTTGATATTGCCGTACAAGCAACGCAGAATCTAAACAATCAACTTCAAACTGCCGCAACTCAAAAAAGTTAAATAACTAGTATTAATATTTCTTATTAAGATTGAAAATATTAATTATATAAAGAAAAATAAAAAAATATAAAAAATTGTTAATATAAAAAAAAAAAAAA]
[+] EMBL BI506404 [ CAAGGAACTCCTGATGTTCAACTAAGCGAACTTATAAGCCAGGCTCAAGCAAACATCAACAATTTAGCAAAACAAATTCAGGAACAATGGAATATCCCTGATCAAGACACTATTGTAAAAACTGTCAAAGATCAAAGCGCCAATTTCGTTAACAATATTCAAGATTACATAAAGAATGTTACTGAAGAGGTCAAAACCAAAACTCCCGAATTGGAAAGATCATGGAATGATGTTAAAACCATGCTCAATAAAGTCGTCGATGATATTAGTAGTGGAATTCCAAATGCTCAGCAACAAGTCGCTGAATTACAAAGTAAATTCCAGCAAGGAGTTCAAACTTTACTTAAAGAATCTGACAAAGCTGCGAAATCTCTGAGCCAACATTCTGGAAAAATACAAGAAGACCTTGCAAAGTTCACAAAACAGGCAGTTGATATTGCTGTACAAGCAACGCAGAATCTAAACAATCAACTTCAAACTGCCGCNACTCAAAAAAGTTAAATAACTAGTATTAATATTTCTTATTAAGATTGAAAATATTAATTATATAAAGAAAAATAAA ]
consensusID : consensus_339#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 770 fasta sequence
[ATACTCGTTTTTAACTTTTATCCGGATACGATATTAATATTTGGATGAATCCGTTGAATACGATTTGTGACACCGCTCCCCCCTCGCGTTCATTCCACATCTTATTATAATATTATTAGCTCTCGTTTCGAAGGTAAGTAATTATTTTTGTCAAAGTTTAACGCAACGTAACGTAACGTAACGCTTCAAAGCGGAATAAAATAAAAGTGAAACTCGGCCAGGGACCGAGCGAATAGAGGCGAGAGAATTTCTGTGAAAGTAGGGAAACAGCGTAGCATACCGTACCCATAAATCGTGTCGAGTCGCGGCGAGGCATTGATTTGCACGCGAAATACTGAATAATTTATCCGGCCAGTTAACCGAATAATTGCACGTTATTCGACTGCTACGAAACACTCTCCCGATGAGCCGGGTAATCGTTCTGTTTATGTTTCACTATTTAGAGAATAATTATAGGATCAACCGATGCGGTCCAGCGATAGTGAATTATTAATCGAACATGCACGCGGCAAACATTTGTCCTGGTCGTATTCTGCATATATTAATTCATTTACCCTCGTCTATAAGAATAAAATACTCTTTTTTAGGAAAATTTTTTTCCATTATTCTTCCCTTCCTTTCTTTCCTCCTTATTCGAAAAAACGAACGTTTCTGGAAGGAAGAGTTGGACCATGGAGAGCATGGTTTTAACATCATTCCATGATCTTTCCAATTCGGGAGTTTGGTTTGACCTCTTCAGTAACATTCTTTATGTAATCTTGAATATTGTT]
[+] EMBL BQ103772 [ATACTCGTTTTTAACTTTTATCCGGATACGATATTAATATTTGGATGAATCCGTTGAATACGATTTGTGACACCGCTCCCCCCTCGCGTTCATTCCACATCTTATTATAATATTATTAGCTCTCGTTTCGAAGGTAAGTAATTATTTTTGTCAAAGTTTAACGCAACGTAACGTAACGTAACGCTTCAAAGCGGAATAAAATAAAAGTGAAACTCGGCCAGGGACCGAGCGAATAGAGGCGAGAGAATTTCTGTGAAAGTAGGGAAACAGCGTAGCATACCGTACCCATAAATCGTGTCGAGTCGCGGCGAGGCATTGATTTGCACGCGAAATACTGAATAATTTATCCGGCCAGTTAACCGAATAATTGCACGTTATTCGACTGCTACGAAACACTCTCCCGATGAGCCGGGTAATCGTTCTGTTTATGTTTCACTATTTAGAGAATAATTATAGGATCAACCGATGCGGTCCAGCGATAGTGAATTATTAATCGAACATGCACGCGGCAAACATTTGTCCTGGTCGTATTCTGCATATATTAATTCATTTACCCTCGTCTATAAGAATAAAATACTCTTTTTTAGGAAAATTTTTTTCCATTATTCTTCCCTTCCTTTCTTTCCTCCTTATTCGAAAAAACGAACGTTTCTGGAAGGAAGAGTTGGACCATGGAGAGCATGGTTTTAACATCATTCCATGATCTTTCCAATTCGGGAGTTTGGTTTGACCTCTTCAGTAACATTCTTTATGTAATCTTGAATATTGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_339#0 AAAATATTTTTCGTTCCATTTAAATAGCAAGATAACTTGAATTAAAAT-CGATGATGAGG 59
consensus_339#1 ---------------------ATACTCGTTTTTAACTTTTATCCGGATACGATATTAATA 39
* * ****** ** ** **** * *
consensus_339#0 GAAGAGCGAAGACGAAGAAGGATGCTGCGGTAACTGCGAGGCGTCATTATCGTTCCGCGT 119
consensus_339#1 TTTGGATGAATCCGTTGAA------TACGAT--TTGTGA--CACCGCTCCCCCCTCGCGT 89
* *** ** *** * ** * ** ** * * * * *****
consensus_339#0 CTCTCCCTCCCCTTCTCCCCCCCGTGTCACGGAAGCGTTCAGGATGCAAAGTAGCATTTG 179
consensus_339#1 TCATTCCACATCTTATTATAATATTATTA-GCTCTCGTTTCGAAGGTAAGTAATTATTTT 148
* ** * *** * * * * * **** * * * ** * ****
consensus_339#0 TACGTATCCTGCGGTGGGACATCGTCAGCTGTTAACTTTTCGAGTTAGCGGAGCAGATAA 239
consensus_339#1 TGT-CAAAGTTTAACGCAACGTAACGTAACGT-AACGCTTCAA---AGCGGAATAAAATA 203
* * * * ** * ** *** *** * ****** * * *
consensus_339#0 GGGCCCATGGGCGGTGGCGGAATAGCACTTTGCCTCCGAGTTACACCGCGATAGGCGTAG 299
consensus_339#1 AAAGTGAAACTCGGCCAGGGACCGAGCGAATAGAGGCGAGAGA-ATTTCTGTGAAAGTAG 262
* *** *** * **** * * * * ****
consensus_339#0 CGTCAAACTTTCGCTACGCCGCACTGTGAAACCGAATTAGAAT-CGAAGAGGTCTCCAAG 358
consensus_339#1 GGAAACAGCGTAGC-ATACCGTACCCATAAATCGTGTCGAGTCGCGGCGAGGCATTGATT 321
* * * * ** * *** ** *** ** * ** **** * *
consensus_339#0 AGCGTTCGATAAAAGTCGATCAGGAGGAGATTCGAATCGTTCTATCTATTCAGT-CACTT 417
consensus_339#1 TGCACGCGA-AATACTGAAT----AATTTATCCGG-CCAGTTAACCGAATAATTGCACGT 375
** *** ** * * ** * ** ** * * * * * * * * *** *
consensus_339#0 TCTGGCTCTTTCACAGTGAATACCTACAAGAAAAATGAAAACCATCCTTACGATTATCTT 477
consensus_339#1 TATTCGACTGCTACGAAACACTCTCCCGATGAGCCGGGTAATCGTTCT---GTTTATGTT 432
* * ** ** * * * * * * ** * * ** * **** **
consensus_339#0 TAGTATTATACTGATTTCGGAGGCCAAAGTTGCTCCGACTAGCACTACCAATTCTCAAGG 537
consensus_339#1 TCACTATTTAGAGAAT----AATTATAGGATCAACCGATGCGGTCCAGCGATAGTGAATT 488
* * ** ** * * * * * **** * * * * ** * **
consensus_339#0 AACTCCTGATGTTCAACTAAGCGAACTTATAAGCCAGGCTCAAGCAAACATCAACAATTT 597
consensus_339#1 ATTAATCGAACATGCACGCGGCAAACATTTGTCCTGGTCGTATTCTGCATATATTAATTC 548
* ** * ** ** *** * * * * * * * * ****
consensus_339#0 AGCAAAACAAATTCAGGAACAATGGAATATCCCTGATCAAGACACTATTGTAAAAACTGT 657
consensus_339#1 ATTTACCCTCGTCTAT-AAGAATAAAATACTCTTTTTTAGGAAAATTTT-------TTTC 600
* * * * * ** *** **** * * * * ** * * ** *
consensus_339#0 CAAAGATCAAAGCGCCAATTTCGTTAACAATATTCAAGATTACATAAAGAATGTTACTGA 717
consensus_339#1 CATTATTCTTCCCTTCCTTTCTTTCCTCCTTATTCGAAAAAAC-----GAACGTTTCTGG 655
** ** * * ** * * ***** * * ** *** *** ***
consensus_339#0 AGAGGTCAAAACCAAAACTCCCGAATTGGAAAGATCATGGAATGATGTTAAAACCATGCT 777
consensus_339#1 AAGGA--------AGAGTT---GGACCATGGAGAGCATGG-----TTTTAACATCAT--T 697
* * * * * * * *** ***** * **** * *** *
consensus_339#0 CAATAAAGTCGTCGATGATATTAGTAGTGGAATTCCAAATGCTCAGCAACAAGTCGCTGA 837
consensus_339#1 CCATGATCTTTCCAAT----TCGGGAGTTTGGTTTGACCTCTTCAGTAACAT-TCTTTAT 752
* ** * * * ** * * *** ** * * **** **** ** *
consensus_339#0 ATTACAAAGTAAATTCCAGCAAGGAGTTCAAACTTTACTTAAAGAATCTGACAAAGCTGC 897
consensus_339#1 GTAATCTTGAATATTGTT------------------------------------------ 770
* * * * ***
consensus_339#0 GAAATCTCTGAGCCAACATTCTGGAAAAATACAAGAAGACCTTGCAAAGTTCACAAAACA 957
consensus_339#1 ------------------------------------------------------------
consensus_339#0 GGCAGTTGATATTGCCGTACAAGCAACGCAGAATCTAAACAATCAACTTCAAACTGCCGC 1017
consensus_339#1 ------------------------------------------------------------
consensus_339#0 AACTCAAAAAAGTTAAATAACTAGTATTAATATTTCTTATTAAGATTGAAAATATTAATT 1077
consensus_339#1 ------------------------------------------------------------
consensus_339#0 ATATAAAGAAAAATAAAAAAATATAAAAAATTGTTAATATAAAAAAAAAAAAAA 1131
consensus_339#1 ------------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |