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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_356#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 659 fasta sequence
[GGAGGCAGGCGTACTTATCGTTTCGATTTATCGAAGCATTTAACGACATTATTCGTAAGAAAACAAATCCAATTTGTAGAATGTAACATTCATCGATAATATTCTTTTGTTAAGTAGAAAACGAATGATACAAATACAGAAAGTGTTCAACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATCAATTAAAGAATTAATAACAGCGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGGTGGACAATAGATTTATTCAAGATAGGCTACAGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTGCTTGGAGATCGATTGGAAAAGCGATGGAAAATTGAGATGGAAAATTCGAAAAAAAAA]
[+] EMBL BI507860 [GGAGGCAGGCGTACTTATCGTTTCGATTTATCGAAGCATTTAACGACATTATTCGTAAGAAAACAAATCCAATTTGTAGAATGTAACATTCATCGATAATATTCTTTTGTTAAGTAGAAAACGAATGATACAAATACAGAAAGTGTTCAACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCG ACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATCAATTAAAGAATTAATAACAGTGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGGTGGACAATAGATTTATTCAAGATAG ]
[+] EMBL BI505028 [GGAGGCAGGCGTACTTATCGTTTCGATTTATCGAAGCATTTAACGACATTATTCGTAAGAAAACAAATCCAATTTGTAGAATGTAACATTCATCGATAATATTCTTTTGTTAAGTAGAAAACGAATGATACAAATACAGAAAGTGTTCAACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCG ACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATCAATTAAAGAATTAATAACAGTGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGGTGGACAA ]
[+] EMBL BI506389 [ CAGAAAGTGTTCAACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATCAATTAAAGAATTAATAACAGCGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGGTGGACAATAGATTTATTCAAGATAGGCTACAGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTGCTTGGAGATCGATTGGAAAAGCGATGGAAAATTGAGATGGAAAATTCGAAAAAAAAA]
[+] EMBL BI509268 [ CAGAAAGTGTTCAACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATCAATTAAAGAATTAATAACAGCGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGGTGGACAATAGATTTATTCAAGATAGGCTACAGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTGCTTGGAGATCGATTGGAAAAGCGATGGAAAATTGAGATGGAAAATTCGAAAAAAAAA]
consensusID : consensus_356#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 571 fasta sequence
[ACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATGTAAGCCCCTTGAATGATAAAATCGTCTTTGTTTAAGAAATCAATATCAAGTGTTCACGATTTTCTTATTTTTTTCACTCCCTTAAAACGAATTATACTTGAATACTTTTTTCACTAGCAATTAAAGAATTAATAACAGTGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGNTGGACAATAGATTTATTCAAGATAGGCTACAGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTG]
[+] EMBL BI503056 [ACAGGTGTACCTTTTATTTTCCTCCACGATACAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGAACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCCTTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATTCGTTCGTTAAGAGGACTCTCAAGTAGATATGTAAGCCCCTTGAATGATAAAATCGTCTTTGTTTAAGAAATCAATATCAAGTGTTCACGATTTTCTTATTTTTTTCACTCCCTTAAAACGAATTATACTTGAATACTTTTTTCACTAGCAATTAAAGAATTAATAACAGTGGGTTAATGCAGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAAGCAAATTTACTATCAGTGTTACTTTGGTGNTGGACAATAGATTTATTCAAGATAGGCTACAGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_356#0 GGAGGCAGGCGTACTTATCGTTTCGATTTATCGAAGCATTTAACGACATTATTCGTAAGA 60
consensus_356#1 ------------------------------------------------------------
consensus_356#0 AAACAAATCCAATTTGTAGAATGTAACATTCATCGATAATATTCTTTTGTTAAGTAGAAA 120
consensus_356#1 ------------------------------------------------------------
consensus_356#0 ACGAATGATACAAATACAGAAAGTGTTCAACAGGTGTACCTTTTATTTTCCTCCACGATA 180
consensus_356#1 -----------------------------ACAGGTGTACCTTTTATTTTCCTCCACGATA 31
*******************************
consensus_356#0 CAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGA 240
consensus_356#1 CAGTTCCATGCGAAGACAAAGAACGATTCCGGATAGTGGATTTGGTTGAACTATCATCGA 91
************************************************************
consensus_356#0 ACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCC 300
consensus_356#1 ACGGGATTTATCTATCTGGAATATCGACAACGTGAATTTAGTGATTGCTCTCAAGATTCC 151
************************************************************
consensus_356#0 TTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATT 360
consensus_356#1 TTATTGTGTCTGTGTCGTGTCAATTTTCAAGTGATTGCTCAATTAGTCAGCAATCAGATT 211
************************************************************
consensus_356#0 CGTTCGTTAAGAGGACTCTCAAGTAGATAT------------------------------ 390
consensus_356#1 CGTTCGTTAAGAGGACTCTCAAGTAGATATGTAAGCCCCTTGAATGATAAAATCGTCTTT 271
******************************
consensus_356#0 ------------------------------------------------------------
consensus_356#1 GTTTAAGAAATCAATATCAAGTGTTCACGATTTTCTTATTTTTTTCACTCCCTTAAAACG 331
consensus_356#0 ----------------------------CAATTAAAGAATTAATAACAGCGGGTTAATGC 422
consensus_356#1 AATTATACTTGAATACTTTTTTCACTAGCAATTAAAGAATTAATAACAGTGGGTTAATGC 391
********************* **********
consensus_356#0 AGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAA 482
consensus_356#1 AGCATACAGAAGAAGATGGACACAACCAATTTGAAATCGAAACCAAATCCACGAGAAAAA 451
************************************************************
consensus_356#0 GCAAATTTACTATCAGTGTTACTTTGGTGGTGGACAATAGATTTATTCAAGATAGGCTAC 542
consensus_356#1 GCAAATTTACTATCAGTGTTACTTTGGTGNTGGACAATAGATTTATTCAAGATAGGCTAC 511
***************************** ******************************
consensus_356#0 AGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTG 602
consensus_356#1 AGAAAGATTCTGCAAACCGATGATTTATATACTCCTTTGAAGACGGATCGATCGAATGTG 571
************************************************************
consensus_356#0 CTTGGAGATCGATTGGAAAAGCGATGGAAAATTGAGATGGAAAATTCGAAAAAAAAA 659
consensus_356#1 ---------------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |