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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_386#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 754 fasta sequence
[TTAACATGGTGCGAAGATGAAGAAGATGGAGTCGAGTCGTACAATGGAAGAGGTTCAAGTGAATCTAACAATCGTTAAAAACAACAATTCTAAAAATTCTCGATATGTATAACATTAATTTATATAAATCCCTATACGTAAAATATCGATCGAGTAAGCCGCTCGCCACGATTCAACTCGTAGAGGATTCTTTTTAATTATCTCTCTTATCATTAATTGTAATAAATCCTCTGGGATATGGGGAAGAGGAGGGAGGGACGGATCGGTCGTGCATCAAGACGTTAGTTTTTCTCAAGCAATTCGATAAAACTCTAAATACATGGCGTATACGTGTATATGCGCGACTACGTGTGCGATTACGCNNTCGTAATTGCGCATATATATGTACGTGTTTGTGTGTGTATGTATATATATATATATATATTATATTTCTCAAAAAAAAGGAAACAGATCACTAGGCCTAATTGGCGGCACAGGGGACAAACAAAACCTCACCAAACCGTCCAAGAAGCTTCGATTTCTCTCTCGAGTATTGCACATTTCCCCTCTTCCAGTTCCAGTTTTCGCTCATTCATCCCCTTTCACGCTTCTTTTCTCTCACAGTCGTTTGAAGAGGACGAATCAGCATTTTCGAACGCAGGTACATGAGCTACACAGAACTGTGATCACTTAAATTACGCGTAATTACGAAAGGAAAATTCGTAGAAGAACTTGGAGCAGATATTGGCATATGTGTTTCGTAGCTTCGTGGACG]
[+] EMBL BI514397 [TTAACATGGTGCGAAGATGAAGAAGATGGAGTCGAGTCGTACAATGGAAGAGGTTCAAGTGAATCTAACAATCGTTAAAAACAACAATTCTAAAAATTCTCGATATGTATAACATTAATTTATATAAATCCCTATACGTAAAATATCGATCGAGTAAGCCGCTCGCCACGATTCAACTCGTAGAGGATTCTTTTTAATTATCTCTCTTATCATTAATTGTAATAAATCCTCTGGGATATGGGGAAGAGGAGGGAGGGACGGATCGGTCGTGCATCAAGACGTTAGTTTTTCTCAAGCAATTCGATAAAACTCTAAATACATGGCGTATACGTGTATATGCGCGACTACGTGTGCGATTACGCCCTCGTAATTGCGCATATATATGTACGTGTTTGTGTGTGTATGTATATATATATATATATATTATATTTCTCAAAA ]
[-] EMBL BI517189 [ ATACGTGTATATGCGCGATTACGTGTGCGATTACGCNNTCGTAATTGCGTATATATATGTACGTGTTTGTGTGTGTATGTATATATATATATATATATTATATTTCTCAAAAAAAAGGAAACAGATCACTAGGCCTAATTGGCGGCACAGGGGACAAACAAAACCTCACCAAACCGTCCAAGAAGCTTCGATTTCTCTCTCGAGTATTGCACATTTCCCCTCTTCCAGTTCCAGTTTTCGCTCATTCATCCCCTTTCACGCTTCTTTTCTCTCACAGTCGTTTGAAGAGGACGAATCAGCATTTTCGAACGCAGGTACATGAGCTACACAGAACTGTGATCACTTAAATTACGCGTAATTACGAAAGGAAAATTCGTAGAAGAACTTGGAGCAGATATTGGCATATGTGTTTCGTAGCTTCGTGGACG]
consensusID : consensus_386#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 271 fasta sequence
[TTTTTGAGAAATATAATATATATATATATATATATATTATATTTCTCAAAAAAAAGGAAACAGATCACTAGGCCTAATTGGCGGCACAGGGGACAAACAAAACCTCACCAAACCGTCCAAGAAGCTTCGATTTCTCTCTCGAGTATTGCACATTTCCCCTCTTCCAGTTCCAGTTTTCGCTCATTCATCCCCTTTCACGCTTCTTTTCTCTCACAGTCGTTTGAAGAGGACGAATCAGCATTTTCGAACGCAGGTACATGAGCTACACAGA]
[-] EMBL BI507746 [TTTTTGAGAAATATAATATATATATATATATATATATTATATTTCTCAAAAAAAAGGAAACAGATCACTAGGCCTAATTGGCGGCACAGGGGACAAACAAAACCTCACCAAACCGTCCAAGAAGCTTCGATTTCTCTCTCGAGTATTGCACATTTCCCCTCTTCCAGTTCCAGTTTTCGCTCATTCATCCCCTTTCACGCTTCTTTTCTCTCACAGTCGTTTGAAGAGGACGAATCAGCATTTTCGAACGCAGGTACATGAGCTACACAGA]
[-] EMBL BI506311 [TTTTTGAGAAATATAATATATATATATATATATATATTATATTTCTCAAAAAAAAGGAAACAGATCACTAGGCCTAATTGGCGGCACAGGGGACAAACAAAACCTCACCAAACCGTCCAAGAAGCTTCGATTTCTCTCTCGAGTATTGCACATTTCCCCTCTTCCAGTTCCAGTTTTCGCTCATTCATCCCCTTTCACGCTTCTTTTCTCTCACAGTCGTTTGAAGAGGACGAATCAGCATTTTCGAACGCAGGTACATGAGCTACACAGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_386#0 TTAACATGGTGCGAAGATGAAGAAGATGGAGTCGAGTCGTACAATGGAAGAGGTTCAAGT 60
consensus_386#1 ------------------------------------------------------------
consensus_386#0 GAATCTAACAATCGTTAAAAACAACAATTCTAAAAATTCTCGATATGTATAACATTAATT 120
consensus_386#1 ------------------------------------------------------------
consensus_386#0 TATATAAATCCCTATACGTAAAATATCGATCGAGTAAGCCGCTCGCCACGATTCAACTCG 180
consensus_386#1 ------------------------------------------------------------
consensus_386#0 TAGAGGATTCTTTTTAATTATCTCTCTTATCATTAATTGTAATAAATCCTCTGGGATATG 240
consensus_386#1 ------------------------------------------------------------
consensus_386#0 GGGAAGAGGAGGGAGGGACGGATCGGTCGTGCATCAAGACGTTAGTTTTTCTCAAGCAAT 300
consensus_386#1 ------------------------------------------------------------
consensus_386#0 TCGATAAAACTCTAAATACATGGCGTATACGTGTATATGCGCGACTACGTGTGCGATTAC 360
consensus_386#1 ------------------------------------------------------------
consensus_386#0 GCNNTCGTAATTGCGCATATATATGTACGTGTTTGTGTG-TGTA-TGTATATATATATAT 418
consensus_386#1 -----------------------------TTTTTGAGAAATATAATATATATATATATAT 31
* **** * * ** * *************
consensus_386#0 ATATATTATATTTCTCAAAAAAAAGGAAACAGATCACTAGGCCTAATTGGCGGCACAGGG 478
consensus_386#1 ATATATTATATTTCTCAAAAAAAAGGAAACAGATCACTAGGCCTAATTGGCGGCACAGGG 91
************************************************************
consensus_386#0 GACAAACAAAACCTCACCAAACCGTCCAAGAAGCTTCGATTTCTCTCTCGAGTATTGCAC 538
consensus_386#1 GACAAACAAAACCTCACCAAACCGTCCAAGAAGCTTCGATTTCTCTCTCGAGTATTGCAC 151
************************************************************
consensus_386#0 ATTTCCCCTCTTCCAGTTCCAGTTTTCGCTCATTCATCCCCTTTCACGCTTCTTTTCTCT 598
consensus_386#1 ATTTCCCCTCTTCCAGTTCCAGTTTTCGCTCATTCATCCCCTTTCACGCTTCTTTTCTCT 211
************************************************************
consensus_386#0 CACAGTCGTTTGAAGAGGACGAATCAGCATTTTCGAACGCAGGTACATGAGCTACACAGA 658
consensus_386#1 CACAGTCGTTTGAAGAGGACGAATCAGCATTTTCGAACGCAGGTACATGAGCTACACAGA 271
************************************************************
consensus_386#0 ACTGTGATCACTTAAATTACGCGTAATTACGAAAGGAAAATTCGTAGAAGAACTTGGAGC 718
consensus_386#1 ------------------------------------------------------------
consensus_386#0 AGATATTGGCATATGTGTTTCGTAGCTTCGTGGACG 754
consensus_386#1 ------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |