These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_390#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 532 fasta sequence [TACAATTGTTACAATATCGTTTTTTTCATTGTGGAAATAACGAATTTTCAACATGGTGCTAAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGGAGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCTATGCAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACTTGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGTCGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAATGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGTATTTGCGTCAATGACAGGCTTAACATTAGAGGAAGCGCGTCGTGTAGCAATTGAAAGGGGTTGGAACGTAGATGGAACGATGGTGCAACCTTGTAAGATTCAGAAAGAA] [+] EMBL BI510744 [TACAATTGTTACAATATCGTTTTTTTCATTGTGGAAATAACGAATTTTCAACATGGTGCTAAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGTAGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCTATGCAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACTTGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGTCGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAATGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGTATTTGCGTCAAT ] [+] EMBL BI514680 [ GTGCTAAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGGAGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCTATGCAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACTTGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGTCGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAATGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGTATTTGCGTCAAT ] [+] EMBL BI511090 [ AGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGGAGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCTATGCAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACTTGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGTCGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAATGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGTATTTGCGTCAATGACAGGCTTAACATTAGAGGAAGCGCGTCGTGTAGCAATTGAAAGGGGTTGGAACGTAGATGGAACGATGGTGCAACCTTGTAAGATTCAGAAAGAA] consensusID : consensus_390#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 437 fasta sequence [GTGCTAAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGGAGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCTACCTGAACGAGAGAGGTTTCGATCTGTCTTTGTTTGATCGAAAAATCGCCGTCGCAGATGCAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACTTGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGTCGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAATGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGTATTTGCGTCAAT] [+] EMBL BI516128 [GTGCTAAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGGAGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCTACCTGAACGAGAGAGGTTTCGATCTGTCTTTGTTTGATCGAAAAATCGCCGTCGCAGATGCAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACTTGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGTCGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAATGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGTATTTGCGTCAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_390#0 TACAATTGTTACAATATCGTTTTTTTCATTGTGGAAATAACGAATTTTCAACATGGTGCT 60 consensus_390#1 -------------------------------------------------------GTGCT 5 ***** consensus_390#0 AAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGG 120 consensus_390#1 AAGTGAAGTGAATAAATTTCTTCATGAATTAGAAAAAGCTGAATTAGAGGCGCCTGGTGG 65 ************************************************************ consensus_390#0 AGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCT 180 consensus_390#1 AGTTGCATCATCACAAACTTATGCTCAATTATTAGCTGTATATCTTTATCAAAACGATCT 125 ************************************************************ consensus_390#0 A---------------------------------------------------------TG 183 consensus_390#1 ACCTGAACGAGAGAGGTTTCGATCTGTCTTTGTTTGATCGAAAAATCGCCGTCGCAGATG 185 * ** consensus_390#0 CAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACT 243 consensus_390#1 CAATGCCAAATACTTGTGGAAGCGGATACCAACGGATCTGAAAAGCGGAAATGCAGAACT 245 ************************************************************ consensus_390#0 TGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGT 303 consensus_390#1 TGGTCAAATATGGATGGTAGGACAGCGTATGTGGCAAAGAGACTGGCCTGCAGTTCATGT 305 ************************************************************ consensus_390#0 CGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAA 363 consensus_390#1 CGCCCTCAATGCAGAATGGAGTGAAGATGTTTCTGATATTATGGCTGCTTTGAAAGATAA 365 ************************************************************ consensus_390#0 TGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGT 423 consensus_390#1 TGTTCGAGAAAGGGCAATCACCTTAATATCAAAGGCTTATTCTTCACTAAGTTTAACCGT 425 ************************************************************ consensus_390#0 ATTTGCGTCAATGACAGGCTTAACATTAGAGGAAGCGCGTCGTGTAGCAATTGAAAGGGG 483 consensus_390#1 ATTTGCGTCAAT------------------------------------------------ 437 ************ consensus_390#0 TTGGAACGTAGATGGAACGATGGTGCAACCTTGTAAGATTCAGAAAGAA 532 consensus_390#1 ------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |