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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_421#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 622 fasta sequence
[AGTAACAATATAAAAAAAACCGTCCGACACGTAACCTGCTCTTGAGATATTGGTATTTCGAACGTAAACAACGATAAATATTAGATATAATCGAGAACAAAATAAAAAAAATGTCGTGTACGAGCGAGCTTTCTCGATCACAGGAATATCTCAGCTTTCGTAGTTCCGTCCCGCTTAGAAAAATCGTCGTTGACGCCGATGGTACTAAGGGATGGAAAGTATACGATTCTAGTCCAAAAACCATTAAATGTCCGCTTATATGTCTTCCACCGGTCAGTGGGACAGCCGATATCTTTTTTAAACAAGTACTGGGCTTAGCAGCAAAAGGATACAGAATCATATCGGCTGAACCGCCCGTGTACTGGAACGTTAAAGAATGGTGTGATGGATTCAGAAAACTTTTGGATTACATGGAATTAGATAAGGTGCATCTTTTCGGCGCTTCATTAGGTGGATTTCTGGCGCAAAAATTCACCGAAGTGAATGCTCATTGTCCTAGAGTAGTATCGTTGGTTTTATGTAACTCGTTCACGGACACGTCGGTGTTCAGTTACAATGATTCCGCGACGATCTTTTGGATTTTGCCATCGTTGGTATTAAAAAAGATGTTAATGGGAAACTT]
[+] EMBL BI504293 [AGTAACAATATAAAAAAAACCGTCCGACACGTAACCTGCTCTTGAGATATTGGTATTTCGAACGTAAACAACGATAAATATTAGATATAATCGAGAACAAAATAAAAAAAATGTCGTGTACGAGCGAGCTTTCTCGATCACAGGAATATCTCAGCTTTCGTAGTTCCGTCCCGCTTAGAAAAATCGTCGTTGACGCCGATGGTACTAAGGGATGGAAAGTATACGATTCTAGTCCAAAAACCATTAAATGTCCGCTTATATGTCTTCCACCGGTCAGTGGGACAGCCGATATCTTTTTTAAACAAGTACTGGGCTTAGCAGCAAAAGGATACAGAATCATATCGGCTGAACCGCCCGTGTACTGGAACGTTAAAGAATGGTGTGATGGATTCAGAAAACTTTTGGATTACATGGAATTAGATAAGGTGCATCTTTTCGGCGCTTCATTAGGTGGATTTCTGGCGCAAAAATTCACCGAAGTGAATGCTCATTGTCCTAGAGTAGTATCGTTGGTTTTATGTAACTCGTTCACGGACACGTCGGTGTTCAGTTACAATGATTCCGCGACGATCTTTTGGATTTTGCCATCGTTGGTATTAAAAAAGATGTTAATGGGAAACTT]
[+] EMBL BI509503 [ TGCTCTTGAGATATTGGTATTTCGAACGTAAACAACGATAAATATTAGATATAATCGAGAACAAAATAAAAAAAATGTCGTGTACGAGCGAGCTTTCTCGATCACAGGAATATCTCAGCTTTCGTAGTTCCGTCCCGCTTAGAAAAATCGTCGTTGACGCCGATGGTACTAAGGGATGGAAAGTATACGATTCTAGTCCAAAAACCATTAAATGTCCGCTTATATGTCTTCCACCGGTCAGTGGGACAGCCGATATCTTTTTTAAACAAGTACTGGGCTTAGCAGCAAAAGGATACA ]
consensusID : consensus_421#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 538 fasta sequence
[TAGATTTAATCTAATATTGAATATATAATTATATTGGTATTTCGAACGTAAACAACGATAAATATTAGATATAATCGAGAACAAAATAAAAAAAATGTCGTGTACGAGCGAGCTTTCTCGATCACAGGAATATCTCAGCTTTCGTAGTTCCGTCCCGCTTAGAAAAATCGTCGTTGACGCCGATGGTACTAAGGGATGGAAAGTATACGATTCTAGTCCAAAAACCATTAAATGTCCGCTTATATGTCTTCCACCGGTCAGTGGGACAGCCGATATCTTTTTTAAACAAGTACTGGGCTTAGCAGCAAAAGGATACAGAATCATATCGGCTGAACCGCCCGTGTACTGGAACGTTAAAGAATGGTGTGATGGATTCAGAAAACTTTTGGATTACATGGAATTAGATAAGGTGCATCTTTTCGGCGCTTCATTAGGTTAGAACGTGGATTTCTGGCGCAAAAATTCACCGAAGTGAATGCTCATTGTCCTAGAGTAGTATCGNNGGTTTTATGTAACTCGTTCACGGACACGTCGGTGT]
[+] EMBL BI505902 [TAGATTTAATCTAATATTGAATATATAATTATATTGGTATTTCGAACGTAAACAACGATAAATATTAGATATAATCGAGAACAAAATAAAAAAAATGTCGTGTACGAGCGAGCTTTCTCGATCACAGGAATATCTCAGCTTTCGTAGTTCCGTCCCGCTTAGAAAAATCGTCGTTGACGCCGATGGTACTAAGGGATGGAAAGTATACGATTCTAGTCCAAAAACCATTAAATGTCCGCTTATATGTCTTCCACCGGTCAGTGGGACAGCCGATATCTTTTTTAAACAAGTACTGGGCTTAGCAGCAAAAGGATACAGAATCATATCGGCTGAACCGCCCGTGTACTGGAACGTTAAAGAATGGTGTGATGGATTCAGAAAACTTTTGGATTACATGGAATTAGATAAGGTGCATCTTTTCGGCGCTTCATTAGGTTAGAACGTGGATTTCTGGCGCAAAAATTCACCGAAGTGAATGCTCATTGTCCTAGAGTAGTATCGNNGGTTTTATGTAACTCGTTCACGGACACGTCGGTGT]
[+] EMBL BI506761 [TAGATTTAATCTAATATTGAATATATAATTATATTGGTATTTCGAACGTAAACAACGATAAATATTAGATATAATCGAGAACAAAATAAAAAAAATGTCGTGTACGAGCGAGCTTTCTCGATCACAGGAATATCTCAGCTTTCGTAGTTCCGTCCCGCTTAGAAAAATCGTCGTTGACGCCGATGGTACTAAGGGATGGAAAGTATACGATTCTAGTCCAAAAACCATTAAATGTCCGCTTATATGTCTTCCACCGGTCAGTGGGACAGCCGATATCTTTTTTAAACAAGTACTGGGCTTAGCAGCAAAAGGATACAGAATCATATCGGCTGAACCGCCCGTGTACTGGAACGTTAAAGAATGGTGTGATGGATTCAGAAAACTTTTGGATTACATGGAATTAGATAAGGTGCATCTTTTCGGCGCTTCATTAGGTTAGAACGTGGATTTCTGGCGCAAAAATTCACCGAAGTGAATGCT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_421#0 AGTAACAATATAAAAAAAACCGTCCGACACGTAACCTGCTCTTGAGATATTGGTATTTCG 60
consensus_421#1 -------------TAGATTTAATCTAATATTGAATATATAATT---ATATTGGTATTTCG 44
* * ** * * ** * ** **************
consensus_421#0 AACGTAAACAACGATAAATATTAGATATAATCGAGAACAAAATAAAAAAAATGTCGTGTA 120
consensus_421#1 AACGTAAACAACGATAAATATTAGATATAATCGAGAACAAAATAAAAAAAATGTCGTGTA 104
************************************************************
consensus_421#0 CGAGCGAGCTTTCTCGATCACAGGAATATCTCAGCTTTCGTAGTTCCGTCCCGCTTAGAA 180
consensus_421#1 CGAGCGAGCTTTCTCGATCACAGGAATATCTCAGCTTTCGTAGTTCCGTCCCGCTTAGAA 164
************************************************************
consensus_421#0 AAATCGTCGTTGACGCCGATGGTACTAAGGGATGGAAAGTATACGATTCTAGTCCAAAAA 240
consensus_421#1 AAATCGTCGTTGACGCCGATGGTACTAAGGGATGGAAAGTATACGATTCTAGTCCAAAAA 224
************************************************************
consensus_421#0 CCATTAAATGTCCGCTTATATGTCTTCCACCGGTCAGTGGGACAGCCGATATCTTTTTTA 300
consensus_421#1 CCATTAAATGTCCGCTTATATGTCTTCCACCGGTCAGTGGGACAGCCGATATCTTTTTTA 284
************************************************************
consensus_421#0 AACAAGTACTGGGCTTAGCAGCAAAAGGATACAGAATCATATCGGCTGAACCGCCCGTGT 360
consensus_421#1 AACAAGTACTGGGCTTAGCAGCAAAAGGATACAGAATCATATCGGCTGAACCGCCCGTGT 344
************************************************************
consensus_421#0 ACTGGAACGTTAAAGAATGGTGTGATGGATTCAGAAAACTTTTGGATTACATGGAATTAG 420
consensus_421#1 ACTGGAACGTTAAAGAATGGTGTGATGGATTCAGAAAACTTTTGGATTACATGGAATTAG 404
************************************************************
consensus_421#0 ATAAGGTGCATCTTTTCGGCGCTTCATTAGGT--------GGATTTCTGGCGCAAAAATT 472
consensus_421#1 ATAAGGTGCATCTTTTCGGCGCTTCATTAGGTTAGAACGTGGATTTCTGGCGCAAAAATT 464
******************************** ********************
consensus_421#0 CACCGAAGTGAATGCTCATTGTCCTAGAGTAGTATCGTTGGTTTTATGTAACTCGTTCAC 532
consensus_421#1 CACCGAAGTGAATGCTCATTGTCCTAGAGTAGTATCGNNGGTTTTATGTAACTCGTTCAC 524
************************************* *********************
consensus_421#0 GGACACGTCGGTGTTCAGTTACAATGATTCCGCGACGATCTTTTGGATTTTGCCATCGTT 592
consensus_421#1 GGACACGTCGGTGT---------------------------------------------- 538
**************
consensus_421#0 GGTATTAAAAAAGATGTTAATGGGAAACTT 622
consensus_421#1 ------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |