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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_428#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 787 fasta sequence
[TCTCTTGACTTTCTTGGCTAGCTGCCTTCTTGTCCTTCGTCTTTCCTTTAGCAGGAGTTGCTGGCTTCGGTTTTGGCTCAAGACTCGGACTCCAATACAATTTTACCGATGTTTTTACGGTCGTGCATCTTCTGCATAGCCTCCGGGACGTCTTCCAAAGCCCATGTCGAGTCCACCACAGGCTTTATTTTACCCTCGTTCCATAAAGCGAATACCCGTTCCACTGCTCGTCTCACAAATGCATGACTTCCATGCTGATACATCAAATGACGCAAATTCAACCCAGACAAGGTTTTATTCTCGTCGAACAGTTTAATGGGAGATACTTTGTCCACTTGCCACCATGATCGTGCTGCTGAGAAGAAGCTCTTAGTTTCGCCAGTGACAACATTACTAGATCCATAAAGAATATATTTTCCCATAGGTTTTAGCAAAGCATATCCTTTGTTGCATTCTTCACCACAAAGGCAATCCAAGACGATATCCACACCTTCTGGTGAGATCTTTCTGACTTCGTTGCTATAGTCCGCGCCTCGTTCCAAGATGTGATCAATGGTGCCAGTTGCTTTCAATGCTTCGTGCTTCGATTTGCTGCACACTCCAAAAATGGTTACATCCTTCACAGTTTTGGCCAATTGGACGACTGCCTGACCCAGACCGCAGCAGGCGCAGCGGACCTTCGTAATCCTATTATGCAGGCTAAAGACGGAAAAAGCATGGTCTGAAGTCTTTTCATCGCACGATCGCGAAAAAACAGCCCAGAACAGGACACAAGATGGGAAAAAAA]
[+] EMBL BQ103809 [TCTCTTGACTTTCTTGGCTAGCTGCCTTCTTGTCCTTCGTCTTTCCTTTAGCAGGAGTTGCTGGCTTCGGTTTTGGCTCAAGACTCGGACTCCAATACAATTTTACCGATGTTTTTACGGTCGTGCATCTTCTGCATAGCCTCCGGGACGTCTTCCAAAGCCCATGTCGAGTCCACCACAGGCTTTATTTTACCCTCGTTCCATAAAGCGAATACCCGTTCCACTGCTCGTCTCACAAATGCATGACTTCCATGCTGATACATCAAATGACGCAAATTCAACCCAGACAAGGTTTTATTCTCGTCGAACAGTTTAATGGGAGATACTTTGTCCACTTGCCACCATGATCGTGCTGCTGAGAAGAAGCTCTTAGTTTCGCCAGTGACAACATTACTAGATCCATAAAGAATATATTTTCCCATAGGTTTTAGCAAAGCATATCCTTTGTTGCATTCTTCACCACAAAGGCAATCCAAGACGATATCCACACCTTCTGGTGAGATCTTTCTGACTTCGTTGCTATAGTCCGCGCCTCGTTCCAAGATGTGATCAATGGTGCCAGTTGCTTTCAATGCTTCGTGCTTCGATTTGCTGCACACTCCAAAAATGGTTACATCCTTCACAGTTTTGGCCAATTGGACGACTGCCTGACCCACACCCCCGCCGGCGCTGTGG ]
[+] EMBL BI508011 [ TCTTCACCACAAAGGCAATCCAAGACGATATCCACACCTTCTGGTGAGATCTTTCTGACTTCGTTGCTATAGTCCGCGCCTCGTTCCAAGATGTGATCAATGGTGCCAGTTGCTTTCAATGCTTCGTGCTTCGATTTGCTGCACACTCCAAAAATGGTTACATCCTTCACAGTTTTGGCCAATTGGACGACTGCCTGACCCTGTCCGTATCACGTTCACCAAACCTTCGTAATCCTATTATGCAGGCTAAAGACGGAAAAAGCATGGTCTGAAGTCTTTTCATCGCACGATCGCGAAAAAACAGCCCAGAACAGGACACAAGATGGGAAAAAAA]
consensusID : consensus_428#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 496 fasta sequence
[GGAGAATGGCGAAGAGAAACCCACGCCAGAACCAAAGGATATGCGGGCTATAGTACTGAACGGTTTCGGCGGACTGAAAAGTGTCAAGGCTTTGAGGAAGCCTGAGCCCACCCTCTCCGAAGGAGAAGTTCTTATCCGAGTCAAAGCATGTGGACTAAATTTCCAAGATTTGATGGCGAGGCAGGGTGCTATTGATTCCCCACCAAAAACTCCTTTCATTATGGGATCCGAGTGCGCAGGTGATATCGAGCAAGTCGGCGAGGGCGTGGAGAACTTTAAAGTGGGCGATCGAGTGGTCGCGCTTCCTGATCACAAGGCGTGGGCAGAGCTTGTCGCTGTACCAGCCACGTCCGTTTTCGCGCTACCAGCCGGAATGAGCTACCTCGATGCAGCGGCGATCACGATGAACTATACTGTTGCTTACATTCTGTTGTTCGAACTGGCTAATTTAACGCCCGGAAAGAATCTGTTACTCCACAGCGCCGGCGGGGGTGTG]
[+] EMBL BI516046 [GGAGAATGGCGAAGAGAAACCCACGCCAGAACCAAAGGATATGCGGGCTATAGTACTGAACGGTTTCGGCGGACTGAAAAGTGTCAAGGCTTTGAGGAAGCCTGAGCCCACCCTCTCCGAAGGAGAAGTTCTTATCCGAGTCAAAGCATGTGGACTAAATTTCCAAGATTTGATGGCGAGGCAGGGTGCTATTGATTCCCCACCAAAAACTCCTTTCATTATGGGATCCGAGTGCGCAGGTGATATCGAGCAAGTCGGCGAGGGCGTGGAGAACTTTAAAGTGGGCGATCTAGTGGTCGCGCTTCCTGATCACAAGGCGTGGGCAGAGCTTGTCGCTGTACCAGCCACGTCCGTTTTCGCGCTACCAGCCGGAATGAGCTACCTCGATGCAGCGGCGATC ]
[+] EMBL BI515767 [ ACCCTCTCCGAAGGAGAAGTTCTTATCCGAGTCAAAGCATGTGGACTAAATTTCCAAGATTTGATGGCGAGGCAGGGTGCTATTGATTCCCCACCAAAAACTCCTTTCATTATGGGATCCGAGTGCGCAGGTGATATCGAGCAAGTCGGCGAGGGCGTGGAGAACTTTAAAGTGGGCGATCGAGTGGTCGCGCTTCCTGATCACAAGGCGTGGGCAGAGCTTGTCGCTGTACCAGCCACGTCCGTTTTCGCGCTACCAGCCGGAATGAGCTACCTCGATGCAGCGGCGATCACGATGAACTATACTGTTGCTTACATTCTGTTGTTCGAACTGGCTAATTTAACGCCCGGAAAGAATCTGTTACTCCACAGCGCCGGCGGGGGTGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_428#0 TCTCTTGACTTTCTTGGCTAGCTGCCTTCTTGTCCTTCGTCTTTCCTTTAGCAGGAGTTG 60
consensus_428#1 ------------------------------------------------------------
consensus_428#0 CTGGCTTCGGTTTTGGCTCAAGACTCGGACTCCAATACAATTTTACCGATGTTTTTACGG 120
consensus_428#1 ------------------------------------------------------------
consensus_428#0 TCGTGCATCTTCTGCATAGCCTCCGGGACGTCTTCCAAAGCCCATGTCGAGTCCACCACA 180
consensus_428#1 ------------------------------------------------------------
consensus_428#0 GGCTTTATTTTACCCTCGTTCCATAAAGCGAATACCCGTTCCACTGCTCGTCTCACAAAT 240
consensus_428#1 -------------------------------------------------GGAGAATGGCG 11
* *
consensus_428#0 GCATGACTTCCATGCTGATACATCAAATGACGCAAATTCAACCCAGACAAGGTTTTATTC 300
consensus_428#1 AAGAGAAACCCACGCCAGAACCAAAGGATATGCGGGCTATAGTACTGAACGGTTTCGG-C 70
** *** ** ** * * ** * * * ***** *
consensus_428#0 TCGTCGAACAGTTTAATGGGAGATACTTTGTCCACTTGCCACCATGATCGTGCTGCTGAG 360
consensus_428#1 GGACTGAAAAGTGTCA----AGGCTTTGAGGAAGCCTGAGCCCACCCTC----TCCGAAG 122
*** *** * * ** * * * ** *** ** * * **
consensus_428#0 AAGAAGCTCTTAGTTTCGCCAGTGACAACATTACTAGATCCATAAAGAATATATTTTCCC 420
consensus_428#1 GAGAAGTTCTTA--TCCG--AGTCAAAGCAT--GTGGAC---TAAA--------TTTCCA 165
***** ***** * ** *** * * *** * ** **** *****
consensus_428#0 ATAGGTTTTAGCAAAGCATATCCTTTGTTGCATTCTTCACCACAAAGGCAATCCAAGACG 480
consensus_428#1 AGATTTGATGGCGAGGCAGGGTGCT-ATTG-ATTCCCCACCAAAAACTCCTTTCATTATG 223
* * * * ** * *** * *** **** ***** *** * * ** * *
consensus_428#0 ATATCCACACCTTCTGGTGAGATCTTTCTGACTTCGTTGCTATAGTCCGCGCCTCGTTCC 540
consensus_428#1 GGATCCGAGTGCGCAGGTGATATCGAGCAAG--TCG--GCGAGGGCGTGGAGAACTTTAA 279
**** * ***** *** * *** ** * * * * **
consensus_428#0 AAGATGTGATCAA-TGGTGCCAGTTGCTTTCAATGCTTCGTGCTTCGATTTGCTGCACAC 599
consensus_428#1 AGTGGGCGATCGAGTGGTCGCGCTTCCTGATCACAAGGCGTGGGCAGA---GCTTGTCGC 336
* * **** * **** * ** ** * **** ** *** * *
consensus_428#0 TCCAAAAATGGTTACATCCTTCACAGTTTTGGCCAATTGGACGACTGCCTGACCCAGACC 659
consensus_428#1 TGTACCAGCCACGTCCGTTTTCGCGCTACCAGCCGGAATGA--GCTACCT---CGATGCA 391
* * * * *** * * *** ** ** *** * * *
consensus_428#0 GCAGCAGGCGCAGCGGACCTTCGTAATCCTATTATGCAG--GCTAAAGACGGAAAAAGCA 717
consensus_428#1 GCGGCGATCACGATGAACTATACTGTTGCTTACATTCTGTTGTTCGAACTGGCTAATTTA 451
** ** * * * ** * * * ** ** * * * * * ** ** *
consensus_428#0 TGGTCTGAAGTCTTTTCATCGCACGATCGCGAAAAAACAGCCCAGAACAGGACACAAGAT 777
consensus_428#1 ACGCCCGGAAAGAATCTGTTACTCCACAGCGCCGGCGGGGGTGTG--------------- 496
* * * * * * * * * *** * *
consensus_428#0 GGGAAAAAAA 787
consensus_428#1 ----------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |