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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_447#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 779 fasta sequence
[ACTGTATTGTCTCGAGCTATTGCTGAATTAGGTATCTATCCTGCTGTCGATCCCCTTGATTCCACTTCTCGTATCATGGATCCTAATATAATTGGTGCTGAACATTATAATGTTGCTCGTGGCGTACAGAAAATCTTACAGGATTACAAATCACTTCAAGATATTATTGCTATCTTAGGTATGGATGAATTATCAGAAGAAGATAAACTCACTGTTGCACGTGCACGTAAAATTCAGAGGTTCTTGTCTCAACCATTCCAGGTTGCTGAGGTATTTACTGGTCACGCTGGTAAATTAGTACCATTAGAAGAAACTATTAAAGGATTTAAGAAAATTCTTGCTGGAGATTATGATCATTTGCCAGAAGTTGCATTCTACATGGTCGGTCCAATCGAAGAAGTAGTAGCAAAAGCAGAATCATTGGCAAAACAATAAATTAATTCNNAGTCATTAATCATGTCATTAAAAAGTAATTAAAACGATCTTCTAATAATACAAGCCTGTTTCATTTTTTCTATAAATATTAGTTTTTATCCAAAAATATAGGGATTTTTAAATAACAATATACGTGGATTAGAAGATTGTTTTCCGTTCGAAATTTCACAAAAAGTACATAAATTTTTCGAAAACATCATGAACATAATTAATCATAAATTTTATATAAATTGTGTAATTTTGTTCCAGATGTTTTCATATTAAATTAATATTGTTATTATTTATAACATATACTTTAATATTATAGTATATGTTAGAAATTAATAAAAATTTTACAAAAAAAA]
[-] EMBL BI517135 [ACTGTATTGTCTCGAGCTATTGCTGAATTAGGTATCTATCCTGCTGTCGATCCCCTTGATTCCACTTCTCGTATCATGGATCCTAATATAATTGGTGCTGAACATTATAATGTTGCTCGTGGCGTACAGAAAATCTTACAGGATTACAAATCACTTCAAGATATTATTGCTATCTTAGGTATGGATGAATTATCAGAAGAAGATAAACTCACTGTTGCACGTGCACGTAAAATTCAGAGGTTCTTGTCTCAACCATTCCAGGTTGCTGAGGTATTTACTGGTCACGCTGGTAAATTAGTACCATTAGAAGAAACTATTAAAGGATTTAAGAAAATTCTTGCTGGAGATTATGATCATTTGCCAGAAGTTGCATTCTACATGGTCGGTCCAATCGAAGAAGTAGTAGCAAAAGC ]
[+] EMBL BI505025 [ TGATTCCACTTCTCGTATCATGGATCCTAATATAATTGGTGCTGAACATTATAATGTTGCTCGTGGCGTACAGAAAATCTTACAGGATTACAAATCACTTCAAGATATTATTGCTATCTTAGGTATGGATGAATTATCAGAAGAAGATAAACTCACTGTTGCACGTGCACGTAAAATTCAGAGGTTCTTGTCTCAACCATTCCAGGTTGCTGAGGTATTTACTGGTCACGCTGGTAAATTAGTACCATTAGAAGAAACTATTAAAGGATTTAAGAAAATTCTTGCTGGAGATTATGATCATTTGCCAGAAGTTGCATTCTACATGGTCGGTCCAATCGAAGAAGTAGTAGCAAAAGCAGAATCATTGGCAAAACAATAAATTAATTCACAGTCATTAATCATGTCATTAAAAAGTAATTAAAACGATCTTCTAATAATACAAGCCTGTTTCATTTTTTCTATAAATATTAGTTTTTATCCAAAAATATAGGGATTTTTAAATAACAATATACGTGGATTAGAAGATTGTTTTCCGTTCGAAATTTCACAAAAAGTACATAAATTTTTCGAAAACATCATGAACATAATTAATCATAAATTTTATATAAA ]
[-] EMBL BI512126 [ GAAGAAGTAGTAGCAAAAGCAGAATCATTGGCAAAACAATAAATTAATTCNNAGTCATTAATCATGTCATTAAAAAGTAATTAAAACGATCTTCTAATAATACAAGCCTGTTTCATTTTTTCTATAAATATTAGTTTTTATCCAAAAATATAGGGATTTTTAAATAACAATATACGTGGATTAGAAGATTGTTTTCCGTTCGAAATTTCACAAAAAGTACATAAATTTTTCGAAAACATCATGAACATAATTAATCATAAATTTTATATAAATTGTGTAATTTTGTTCCAGATGTTTTCATATTAAATTAATATTGTTATTATTTATAACATATACTTTAATATTATAGTATATGTTAGAAATTAATAAAAATTTTACAAAAAAAA]
consensusID : consensus_447#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 370 fasta sequence
[GCAATAGCTCGAGACAATACAGTTGTAGCGTCTAAATGAGCAAAGGTAGTGGCAGGCGCAGGATCTGTCAAATCATCAGCAGGTACATAAATAGCTTGCACAGAAGTAATAGATCCTAATATAATTGGTGCTGAACATTATAATGTTGCTCGTGGCGTACAGAAAATCTTACAGGATTACAAATCACTTCAAGATATTATTGCTATCTTAGGTATGGATGAATTATCAGAAGAAGATAAACTCACTGTTGCACGTGCACGTAAAATTCAGAGGTTCTTGTCTCAACCATTCCAGGTTGCTGAGGTATTTACTGGTCACGCTGGTAAATTAGTACCATTAGAAGAAACTATTAAAGGATTTAAGAAAATTC]
[+] EMBL BI511537 [GCAATAGCTCGAGACAATACAGTTGTAGCGTCTAAATGAGCAAAGGTAGTGGCAGGCGCAGGATCTGTCAAATCATCAGCAGGTACATAAATAGCTTGCACAGAAGTAATAGATCCTAATATAATTGGTGCTGAACATTATAATGTTGCTCGTGGCGTACAGAAAATCTTACAGGATTACAAATCACTTCAAGATATTATTGCTATCTTAGGTATGGATGAATTATCAGAAGAAGATAAACTCACTGTTGCACGTGCACGTAAAATTCAGAGGTTCTTGTCTCAACCATTCCAGGTTGCTGAGGTATTTACTGGTCACGCTGGTAAATTAGTACCATTAGAAGAAACTATTAAAGGATTTAAGAAAATTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_447#0 ---------------------ACTGTATTGTCT---CGAGCTATTGCTGAATTAGGT--- 33
consensus_447#1 GCAATAGCTCGAGACAATACAGTTGTAGCGTCTAAATGAGCAAAGGTAGTGGCAGGCGCA 60
**** **** **** * * * ***
consensus_447#0 --ATCTATCCTGCTGTCGATC--CCCTTGATTCCACTTCTCGTA--TCATGGATCCTAAT 87
consensus_447#1 GGATCTGTCAAATCATCAGCAGGTACATAAATAGCTTGCACAGAAGTAATAGATCCTAAT 120
**** ** ** * * * * * * * * * ** *********
consensus_447#0 ATAATTGGTGCTGAACATTATAATGTTGCTCGTGGCGTACAGAAAATCTTACAGGATTAC 147
consensus_447#1 ATAATTGGTGCTGAACATTATAATGTTGCTCGTGGCGTACAGAAAATCTTACAGGATTAC 180
************************************************************
consensus_447#0 AAATCACTTCAAGATATTATTGCTATCTTAGGTATGGATGAATTATCAGAAGAAGATAAA 207
consensus_447#1 AAATCACTTCAAGATATTATTGCTATCTTAGGTATGGATGAATTATCAGAAGAAGATAAA 240
************************************************************
consensus_447#0 CTCACTGTTGCACGTGCACGTAAAATTCAGAGGTTCTTGTCTCAACCATTCCAGGTTGCT 267
consensus_447#1 CTCACTGTTGCACGTGCACGTAAAATTCAGAGGTTCTTGTCTCAACCATTCCAGGTTGCT 300
************************************************************
consensus_447#0 GAGGTATTTACTGGTCACGCTGGTAAATTAGTACCATTAGAAGAAACTATTAAAGGATTT 327
consensus_447#1 GAGGTATTTACTGGTCACGCTGGTAAATTAGTACCATTAGAAGAAACTATTAAAGGATTT 360
************************************************************
consensus_447#0 AAGAAAATTCTTGCTGGAGATTATGATCATTTGCCAGAAGTTGCATTCTACATGGTCGGT 387
consensus_447#1 AAGAAAATTC-------------------------------------------------- 370
**********
consensus_447#0 CCAATCGAAGAAGTAGTAGCAAAAGCAGAATCATTGGCAAAACAATAAATTAATTCNNAG 447
consensus_447#1 ------------------------------------------------------------
consensus_447#0 TCATTAATCATGTCATTAAAAAGTAATTAAAACGATCTTCTAATAATACAAGCCTGTTTC 507
consensus_447#1 ------------------------------------------------------------
consensus_447#0 ATTTTTTCTATAAATATTAGTTTTTATCCAAAAATATAGGGATTTTTAAATAACAATATA 567
consensus_447#1 ------------------------------------------------------------
consensus_447#0 CGTGGATTAGAAGATTGTTTTCCGTTCGAAATTTCACAAAAAGTACATAAATTTTTCGAA 627
consensus_447#1 ------------------------------------------------------------
consensus_447#0 AACATCATGAACATAATTAATCATAAATTTTATATAAATTGTGTAATTTTGTTCCAGATG 687
consensus_447#1 ------------------------------------------------------------
consensus_447#0 TTTTCATATTAAATTAATATTGTTATTATTTATAACATATACTTTAATATTATAGTATAT 747
consensus_447#1 ------------------------------------------------------------
consensus_447#0 GTTAGAAATTAATAAAAATTTTACAAAAAAAA 779
consensus_447#1 --------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |