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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_452#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 476 fasta sequence
[TCCAGATATGATATTATCTTCTTCACGAGATAAAACTTTGATTGTGTGGAAATTAACACGTGACGAAGCTAATTATGGTATTCCTCAAAAACGCTTGTATGGTCATTCTCATTTTATTAGTGATGTAGTTCTATCATCTGATGGTAATTATGCTCTGTCTGGTTCGTGGGACAAAACTCTTCGCCTTTGGGATTTGGCTGCAGGTCGTACCACACGAAGATTCGAAGATCATACCAAGGTGTGAAATTTTTCTTCTGATCTATCGTCACTCCTCATGAAATATATGGAAGCTTTTTTTTTTTTTAATTTTTTTTTATTGAATGCTATTGGCAAAAGATGTAACTGTATGAATGTTTAGGAATATACTGAAGCTTTTTTTTATATATTTTTTTTTTTATATTTAATAAATAGAAGNGNNGGGCAATTAAATATATAGTATTGATGTCTTAAGTGTTGCCTTTTCTATTTATTAAAAA]
[+] EMBL BI511996 [TCCAGATATGATATTATCTTCTTCACGAGATAAAACTTTGATTGTGTGGAAATTAACACGTGACGAAGCTAATTATGGTATTCCTCAAAAACGCTTGTATGGTCATTCTCATTTTATTAGTGATGTAGTTCTATCATCTGATGGTAATTATGCTCTGTCTGGTTCGTGGGACAAAACTCTTCGCCTTTGGGATTTGGCTGCAGGTCGTACCACACGAAGATTCGAAGATCATACCAAGGTGTGAAATTTTTCTTCTGATCTATCGTCACTCCTCATGAAATATATGGAAGCTTTTTTTTTTTTTAATTTTTTTTTATTGAATGCTATTGGCAAAAGATGTAACTGTATGAATGTTTAGGAATATACTGAAGCTTTTTTTTATATATTTTTTTTTTTATATTTAATAAATAGAAGNGNNGGGCAATTAAATATATAGTATTGATGTCTTAAGTGTTGCCTTTTCTATTTATTAAAAA]
consensusID : consensus_452#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 452 fasta sequence
[ACCCAAATCGCTACAAATCCAAAATATCCAGATATGATATTATCTTCTTCACGAGATAAAACTTTGATTGTGTGGAAATTAACACGTGACGAAGCTAATTATGGTATTCCTCAAAAACGCTTGTATGGTCATTCTCATTTTATTAGTGATGTAGTTCTATCATCTGATGGTAATTATGCTCTGTCTGGTTCGTGGGACAAAACTCTTCGCCTTTGGGATTTGGCTGCAGGTCGTACCACACGAAGATTCGAAGATCATACCAAGGATGTCTTAAGTGTTGCCTTTTCTGTGGATAACCGTCAAATTGTCTCTGGTTCTCGAGATAAAACAATTAAATTATGGAATACTTTAGCTGAATGCAAGTATACTATTCAAGATGATGGGCACACAGACTGGGTCAGTTGTGTACGTTTTTCGCCAAACCATTCAAATCCCATTATTGTTTCTGCAGG]
[+] EMBL BI512274 [ACCCAAATCGCTACAAATCCAAAATATCCAGATATGATATTATCTTCTTCACGAGATAAAACTTTGATTGTGTGGAAATTAACACGTGACGAAGCTAATTATGGTATTCCTCAAAAACGCTTGTATGGTCATTCTCATTTTATTAGTGATGTAGTTCTATCATCTGATGGTAATTATGCTCTGTCTGGTTCGTGGGACAAAACTCTTCGCCTTTGGGATTTGGCTGCAGGTCGTACCACACGAAGATTCGAAGATCATACCAAGGATGTCTTAAGTGTTGCCTTTTCTGTGGATAACCGTCAAATTGTCTCTGGTTCTCGAGATAAAACAATTAAATTATGGAATACTTTAGCTGAATGCAAGTATACTATTCAAGATGATGGGCACACAGACTGGGTCAGTTGTGTACGTTTTTCGCCAAACCATTCAAATCCCATTATTGTTTCTGCAGG]
[+] EMBL BI515272 [ GCTACAAATCCAAAATATCCAGATATGATATTATCTTCTTCACGAGATAAAACTTTGATTGTGTGGAAATTAACACGTGACGAAGCTAATTATGGTATTCCTCAAAAACGCTTGTATGNNNATTCTCATTTTATTAGTGATGTAGTTCTATCATCTGATGGTAATTATGCTCTGTCTGGTTCGTGGGACAAAACTCTTCGCCTTTGGGATTTGGCTGCAGGTCGTACCACACGAAGATTCGAAGATCATACCAAGGATGTCTTAAGTGTTGCCTTTTCTGTGGATAACCGTCAAATTGTCTCTGGTTCTCGAGATAAAACAATTAAATTATGGAATACTTTAGCTGAATGCAAGTATACTATTCAAGATGATGGGCACACAGACTGGGTCAGTTGTGTACGTTTTTCGCCAAACCATTCAAATCC ]
[+] EMBL BI512701 [ TACAAATCCAAAATATCCAGATATGATATTATCTTCTTCACGAGATAAAACTTTGATTGTGTGGAAATTAACACGTGACGAAGCTAATTATGGTATTCCTCAAAAACGCTTGTATGGTCATTCTCATTTTATTAGTGATGTAGTTCTATCATCTGATGGTAATTATGCTCTGTCTGGTTCGTGGGACAAAACTCTTCGCCTTTGGGATTTGGCTGCAGGTCGTACCACACGAAGATTCGAAGATCATACCAAGGATGTCTTAAGTGTTGCCTTTTCTGTGGATAACCGTCAAATTGTCTCTGGTTCTCGAGATAAAACAATTAAATTATGGAATACTTTAGCTGAATGCAAGTATACTATTCAAGATGATGGGCACACAGACTGGGTCAGTTGTGTACGTTTTTCGCCAAACCATTCAAATCCCATTATTGTTTCTGC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_452#0 --------------------------TCCAGATATGATATTATCTTCTTCACGAGATAAA 34
consensus_452#1 ACCCAAATCGCTACAAATCCAAAATATCCAGATATGATATTATCTTCTTCACGAGATAAA 60
**********************************
consensus_452#0 ACTTTGATTGTGTGGAAATTAACACGTGACGAAGCTAATTATGGTATTCCTCAAAAACGC 94
consensus_452#1 ACTTTGATTGTGTGGAAATTAACACGTGACGAAGCTAATTATGGTATTCCTCAAAAACGC 120
************************************************************
consensus_452#0 TTGTATGGTCATTCTCATTTTATTAGTGATGTAGTTCTATCATCTGATGGTAATTATGCT 154
consensus_452#1 TTGTATGGTCATTCTCATTTTATTAGTGATGTAGTTCTATCATCTGATGGTAATTATGCT 180
************************************************************
consensus_452#0 CTGTCTGGTTCGTGGGACAAAACTCTTCGCCTTTGGGATTTGGCTGCAGGTCGTACCACA 214
consensus_452#1 CTGTCTGGTTCGTGGGACAAAACTCTTCGCCTTTGGGATTTGGCTGCAGGTCGTACCACA 240
************************************************************
consensus_452#0 CGAAGATTCGAAGATCATACCAAGG-TGTGAAATTTTTCTTCTGATCTATCGTCACTCCT 273
consensus_452#1 CGAAGATTCGAAGATCATACCAAGGATGTCTTAAGTGTTGCCTTTTCTGTGGATAACCGT 300
************************* *** * * * ** *** * * * * *
consensus_452#0 CATGAAATATATGGAAGCTTTTTTTTTTTTTAATTTTTTTTTATTGAATGCTATTGGCAA 333
consensus_452#1 CAAATTGTCTCTGG----TTCTCGAGATAAAACAATTAAATTATGGAATACTTTAGCTGA 356
** * * *** ** * * * ** **** **** ** * * *
consensus_452#0 AAGATGTAACTGTATGAATGTTTAGGAATATACTGAAGCTTTTTTTTATATATTTTTTTT 393
consensus_452#1 ATGCAAGTATACTATTCAAGATGATGGGCACACAGACTGGGTCAGTTGTGTACGTTTTTC 416
* * * *** * * * * * * ** ** * ** * ** *****
consensus_452#0 TTTATATTTAATAAATAGAAGNGNNGGGCAATTAAATATATAGTATTGATGTCTTAAGTG 453
consensus_452#1 GCCAAACCATTCAAATCCCATTATTGTTTCTGCAGG------------------------ 452
* * **** * * *
consensus_452#0 TTGCCTTTTCTATTTATTAAAAA 476
consensus_452#1 -----------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |