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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_464#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 760 fasta sequence
[AAGNAAGGTTTAGTGCCTTGCATCGACTCACTACGTTTGAATTGAAGGAAATGAAGAGGAGGGAACAAGAACGGGAAGAAGAGGAAAGACGCAAGAAAGAGGAGGCCGCGGCAGCCGAGGCAGCTCGATTAGCTAAAGCAACGCCTGTAACTAGTCCAGACGAACCACCTAGCGAGAGAGCAGAAGCAGAGGGTGTACCAAGTGGGGAACGTCCAACTGGAGAAGATGAGTCGCATGTGGCACCTCGCAAGGCTTCTACACGTACACCACAGCCTCAAGACAAGCCCAAGGAAGAACAACGAAGTCCCACCGACGATGAATTCGAAGGCGTATTGCAACGGAAGCACGAATGGGAGAGTACAACGAAGAAAGCGTCTAATCGATCTTGGCACAAGGTGTACATGGTTGTACGTGGACAAAGCTTGTTTGTATATACGGACCAAAAATCGTACAAGGCAGCGCCTGATCAACCGTACAAGGGAGAATCTCCTCTCGATCTCAGAGGAGCTACTATTACCGTGGCGAGTGATTATACTAAGAAGAAACACGTCTTCCGAGTAAAGTCACAAAGCGGATCAGATTTCCTATTTCAGGCTAAAGATGATTCTGAAATGAACGAATGGGTTACCGTGTTGAATCAAGCGGCACAAGGTACATCAGGCGCGGGCACATCCAGGGCGCACACTTTGCCCGCGCCCACGCAAGCCGAAACTAAACGACGTAGTTTCTTCACTCTCAAGAAAAACTAAACTGGAGCAGT]
[+] EMBL BI512830 [AAGNAAGGTTTAGTGCCTTGCATCGACTCACTACGTTTGAATTGAAGGAAATGAAGAGGAGGGAACAAGAACGGGAAGAAGAGGAAAGACGCAAGAAAGAGGAGGCCGCGGCAGCCGAGGCAGCTCGATTAGCTAAAGCAACGCCTGTAACTAGTCCAGACGAACCACCTAGCGAGAGAGCAGAAGCAGAGGGTGTACCAAGTGGGGAACGTCCAACTGGAGAAGATGAGTCGCATGTGGCACCTCGCAAGGCTTCTACACGTACACCACAGCCTCAAGACAAGCCCAAGGAAGAACAACGAAGTCCCACCGACGATGAATTCGAAGGCGTATTGCAACGGAAGCACGAATGGGAGAGTACAACGAAGAAAGCGTCTAATCGATCTTGGCACAAGGTGTACATGGTTGTACGTGGACAAAG ]
[+] EMBL BI511281 [ TGTAACTAGTCCAGACGAACCACCTAGCGAGAGAGCAGAAGCAGAGGGTGTACCAAGTGGGGAACGTCCAACTGGAGAAGATGAGTCGCATGTGGCACCTCGCAAGGCTTCTACACGTACACCACAGCCTCAAGACAAGCCCAAGGAAGAACAACGAAGTCCCACCGACGATGAATTCGAAGGCGTATTGCAACGGAAGCACGAATGGGAGAGTACAACGAAGAAAGCGTCTAATCGATCTTGGCACA ]
[+] EMBL BI516414 [ aaCTGGAGAAGATGAGTCGCATGAACAACGAAGTCCCACCGACGATGAATTCGAAGGCGTATTGCAACGGAAGCACGAATGGGAGAGTACAACGAAGAAAGCGTCTAATCGATCTTGGCACAAGGTGTACATGGTTGTACGTGGACAAAGCTTGTTTGTATATACGGACCAAAAATCGTACAAGGCAGCGCCTGATCAACCGTACAAGGGAGAATCTCCTCTCGATCTCAGAGGAGCTACTATTACCGTGGCGAGTGATTATACTAAGAAGAAACACGTCTTCCGAGTAAAGTCACAAAGCGGATCAGATTTCCTATTTCAGGCTAAAGATGATTCTGAAATGAACGAATGGGTTACCGTGTTGAATCAAGCGGCACAAGGTACATCAGGCGCGGGCACATCCAGGGCGCACACTTTGCCCGCGCCCACGCAAGCCGAAACTAAACGACGTAGTTTCTTCACTCTCAAGAAAAACTAAACTGGAGCAGT]
consensusID : consensus_464#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 518 fasta sequence
[TGTAACTAGTCCAGACGAACCACCTAGCGAGAGAGCAGAAGCAGAGGGTGTACCAAGTGGGGAACGTCCAACTGGAGAAGATGAGTCGCATGAACAACGAAGTCCCACCGACGATGAATTCGAAGGCGTATTGCAACGGAAGCACGAATGGGAGAGTACAACGAAGAAAGCGTCTAATCGATCTTGGCACAAGGTGTACATGGTTGTACGTGGACAAAGCTTGTTTGTATATACGGACCAAAAATCGTACAAGGCAGCGCCTGATCAACCGTACAAGGGAGAATCTCCTCTCGATCTCAGAGGAGCTACTATTACCGTGGCGAGTGATTATACTAAGAAGAAACACGTCTTCCGAGTAAAGTCACAAAGCGGATCAGATTTCCTATTTCAGGCTAAAGATGATTCTGAAATGAACGAATGGGTTACCGTGTTGAATCAAGCGGCACAAGGTACATCAGGCGCGGGCACATCCAGGGCGCACACTTTGCCCGCGCCCACGCAAGCCGAAACTAAACGAC]
[+] EMBL BI515813 [TGTAACTAGTCCAGACGAACCACCTAGCGAGAGAGCAGAAGCAGAGGGTGTACCAAGTGGGGAACGTCCAACTGGAGAAGATGAGTCGCATGAACAACGAAGTCCCACCGACGATGAATTCGAAGGCGTATTGCAACGGAAGCACGAATGGGAGAGTACAACGAAGAAAGCGTCTAATCGATCTTGGCACAAGGTGTACATGGTTGTACGTGGACAAAGCTTGTTTGTATATACGGACCAAAAATCGTACAAGGCAGCGCCTGATCAACCGTACAAGGGAGAATCTCCTCTCGATCTCAGAGGAGCTACTATTACCGTGGCGAGTGATTATACTAAGAAGAAACACGTCTTCCGAGTAAAGTCACAAAGCGGATCAGATTTCCTATTTCAGGCTAAAGATGATTCTGAAATGAACGAATGGGTTACCGTGTTGAATCAAGCGGCACAAGGTACATCAGGCGCGGGCACATCCAGGGCGCACACTTTGCCCGCGCCCACGCAAGCCGAAACTAAACGAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_464#0 AAGNAAGGTTTAGTGCCTTGCATCGACTCACTACGTTTGAATTGAAGGAAATGAAGAGGA 60
consensus_464#1 ------------------------------------------------------------
consensus_464#0 GGGAACAAGAACGGGAAGAAGAGGAAAGACGCAAGAAAGAGGAGGCCGCGGCAGCCGAGG 120
consensus_464#1 ------------------------------------------------------------
consensus_464#0 CAGCTCGATTAGCTAAAGCAACGCCTGTAACTAGTCCAGACGAACCACCTAGCGAGAGAG 180
consensus_464#1 -------------------------TGTAACTAGTCCAGACGAACCACCTAGCGAGAGAG 35
***********************************
consensus_464#0 CAGAAGCAGAGGGTGTACCAAGTGGGGAACGTCCAACTGGAGAAGATGAGTCGCATGTGG 240
consensus_464#1 CAGAAGCAGAGGGTGTACCAAGTGGGGAACGTCCAACTGGAGAAGATGAGTCGCATG--- 92
*********************************************************
consensus_464#0 CACCTCGCAAGGCTTCTACACGTACACCACAGCCTCAAGACAAGCCCAAGGAAGAACAAC 300
consensus_464#1 ------------------------------------------------------AACAAC 98
******
consensus_464#0 GAAGTCCCACCGACGATGAATTCGAAGGCGTATTGCAACGGAAGCACGAATGGGAGAGTA 360
consensus_464#1 GAAGTCCCACCGACGATGAATTCGAAGGCGTATTGCAACGGAAGCACGAATGGGAGAGTA 158
************************************************************
consensus_464#0 CAACGAAGAAAGCGTCTAATCGATCTTGGCACAAGGTGTACATGGTTGTACGTGGACAAA 420
consensus_464#1 CAACGAAGAAAGCGTCTAATCGATCTTGGCACAAGGTGTACATGGTTGTACGTGGACAAA 218
************************************************************
consensus_464#0 GCTTGTTTGTATATACGGACCAAAAATCGTACAAGGCAGCGCCTGATCAACCGTACAAGG 480
consensus_464#1 GCTTGTTTGTATATACGGACCAAAAATCGTACAAGGCAGCGCCTGATCAACCGTACAAGG 278
************************************************************
consensus_464#0 GAGAATCTCCTCTCGATCTCAGAGGAGCTACTATTACCGTGGCGAGTGATTATACTAAGA 540
consensus_464#1 GAGAATCTCCTCTCGATCTCAGAGGAGCTACTATTACCGTGGCGAGTGATTATACTAAGA 338
************************************************************
consensus_464#0 AGAAACACGTCTTCCGAGTAAAGTCACAAAGCGGATCAGATTTCCTATTTCAGGCTAAAG 600
consensus_464#1 AGAAACACGTCTTCCGAGTAAAGTCACAAAGCGGATCAGATTTCCTATTTCAGGCTAAAG 398
************************************************************
consensus_464#0 ATGATTCTGAAATGAACGAATGGGTTACCGTGTTGAATCAAGCGGCACAAGGTACATCAG 660
consensus_464#1 ATGATTCTGAAATGAACGAATGGGTTACCGTGTTGAATCAAGCGGCACAAGGTACATCAG 458
************************************************************
consensus_464#0 GCGCGGGCACATCCAGGGCGCACACTTTGCCCGCGCCCACGCAAGCCGAAACTAAACGAC 720
consensus_464#1 GCGCGGGCACATCCAGGGCGCACACTTTGCCCGCGCCCACGCAAGCCGAAACTAAACGAC 518
************************************************************
consensus_464#0 GTAGTTTCTTCACTCTCAAGAAAAACTAAACTGGAGCAGT 760
consensus_464#1 ----------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |