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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_465#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 738 fasta sequence
[GCCGGATATGTCTAGTATATCTCATTATCCCTTAAAGGTGATATTTGCAATTCATTTAGTCCTAGTAACATGGGGCATTCAGGGACATTGGTGTCCAAAATCTGTAATGTTTTACAATTTCCTTTTCTTCGTCTGCTTATTGTGGGCTATTCATAATATCGAATCAGATGAACCTCTACAATTTGCACTTTTTATAAATGTACTTTCCATATTTTTTGATGTAGTAACATTAGCAGTCTATTTTCCAACAACGTATGCATCTGAGAAGTTTAGTGCAGCGATTATGATCTTAAACATGATTGCTCGCATCATCACAAGCATATATCTTCTACGAATAGGCCAAGCAAGAGGTGGATGTTTAGCCACAATGTTCACTACAAATCCTGCAATGGGCTTTGGTCGACAGGATTACGAGGACATATCTCATCCGATTCCACAAAATTCCGATTTTGCTGGAGTTTAAAAATAGAACATGACGTTTCTAAAATTCGATACGTCGAAAATTACGCGATTTCATTATCGAATCTCTCGTAGCTCGTAAGAAGTACGCGCATCTATAATCATGACATTAAAATCTATTTTATTTATTGTATATATCAGGATTTTCAATATCGATTAACAATGCAAAATAGAAAGAAATTTATGTATATAAACATGCAAATAACATTATATATCAAAACGTGAAAACGCAAAGAAATATAGAATAATAATAACAACAACAACAACAATAAAAAAAAA]
[+] EMBL BI511696 [GCCGGATATGTCTAGTATATCTCATTATCCCTTAAAGGTGATATTTGCAATTCATTTAGTCCTAGTAACATGGGGCATTCAGGGACATTGGTGTCCAAAATCTGTAATGTTTTACAATTTCCTTTTCTTCGTCTGCTTATTGTGGGCTATTCATAATATCGAATCAGATGAACCTCTACAATTTGCACTTTTTATAAATGTACTTTCCATATTTTTTGATGTAGTAACATTAGCAGTCTATTTTCCAACAACGTATGCATCTGAGAAGTTTAGTGCAGCGATTATGATCTTAAACATGATTGCTCGCATCATCACAAGCATATATCTTCTACGAATAGGCCAAGCAAGAGGTGGATGTTTAGCCACAATGTTCACTACAAATCCTGCAATGGGCTTTGGTCGACAGGATTACGNGGACATATCTCATCCGATTCCACAAAATTCCGATTTTGCTGGAGTTTAAAAATAGAACATGACGTTTCTAAAATTCG ]
[+] EMBL BI512948 [ CGGATATGTCTAGTATATCTCATTATCCCTTAAAGGTGATATTTGCAATTCATTTAGTCCTAGTAACATGGGGCATTCAGGGACATTGGTGTCCAAAATCTGTAATGTTTTACAATTTCCTTTTCTTCGTCTGCTTATTGTGGGCTATTCATAATATCGAATCAGATGAACCTCTACAATTTGCACTTTTTATAAATGTACTTTCCATATTTTTTGATGTAGTAACATTAGCAGTCTATTTTCCAACAACGTATGCATCTGAGAAGTTTAGTGCAGCGATTATGATCTTAAACATGATTGCTCGCATCATCACAAGCATATATCTTCTACGAATAGGCCAAGCAAGAGGTGGATGTTTAGCCACAATGTTCACTACAAATCCTGCAATGGGCTTTGGTCGACAGGATTACGAGGACATATCTCATCCGATTCCACAAAATTCCGATTTTGCTGGAGTTTAAAAATAGAACATGACGTTTCTAAAATTCGATACGTCGAAAATTACGCGATTTCATTATCGAATCTCTCGTAGCTCGTAAGAAGTACGCGCATCTATAATCATGACATTAA ]
[+] EMBL BI510523 [ TGATGTAGTAACATTAGCAGTCTATTTTCCAACAACGTATGCATCTGAGAAGTTTAGTGCAGCGATTATGATCTTAAACATGATTGCTCGCATCATCACAAGCATATATCTTCTACGAATAGGCCAAGCAAGAGGTGGATGTTTAGCCACAATGTTCACTACAAATCCTGCAATGGGCTTTGGTCGACAGGATTACGAGGACATATCTCATCCGATTCCACAAAATTCCGATTTTGCTGGAGTTTAAAAATAGAACATGACGTTTCTAAAATTCGATACGTCGAAAATTACGCGATTTCATTATCGAATCTCTCGTAGCTCGTAAGAAGTACGCGCATCTATAATCATGACATTAAAATCTATTTTATTTATTGTATATATCAGGATTTTCAATATCGATTAACAATGCAAAATAGAAAGAAATTTATGTATATAAACATGCAAATAACATTATATATCAAAACGTGAAAACGCAAAGAAATATAGAATAATAATAACAACAACAACAACAATAAAAAAAAA]
consensusID : consensus_465#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 448 fasta sequence
[GGCCAAGCAAGAGGTGGATGTTTAGCCACAATGTTCACTACAAATCCTGCAATGGGTCAGTAATACATTGGATACAGATGTTTTGTAGGCCTGCATTGCTTCTTCAAAATTATGCTTTAAGTAGGTGCATGAAATCATTTTTCAAATATGCATATTAGATTGCATAATTGTTTTAAATTATTGATATAGGAATATTTATTTTTCATCATAATGCTTGTCACGAGAAGGATAGATTCGTTTGTGATGCACGAATTTTACGTATCAGTCATCTTGAAATGTTTTATGTTGTTTTATCGTCTTTTGTACATATGATTTATAATTTTTAGCGGGGGTGGGGACAGACGTTCATAAACGTTTTTCTATTCTAGGCTTTGGTCGACAGGATTACGAGGACATATCTCATCCGATTCCACAAAATTCCGATTTTGCTGGAGTTTAAAAATAGAAC]
[+] EMBL BI517068 [GGCCAAGCAAGAGGTGGATGTTTAGCCACAATGTTCACTACAAATCCTGCAATGGGTCAGTAATACATTGGATACAGATGTTTTGTAGGCCTGCATTGCTTCTTCAAAATTATGCTTTAAGTAGGTGCATGAAATCATTTTTCAAATATGCATATTAGATTGCATAATTGTTTTAAATTATTGATATAGGAATATTTATTTTTCATCATAATGCTTGTCACGAGAAGGATAGATTCGTTTGTGATGCACGAATTTTACGTATCAGTCATCTTGAAATGTTTTATGTTGTTTTATCGTCTTTTGTACATATGATTTATAATTTTTAGCGGGGGTGGGGACAGACGTTCATAAACGTTTTTCTATTCTAGGCTTTGGTCGACAGGATTACGAGGACATATCTCATCCGATTCCACAAAATTCCGATTTTGCTGGAGTTTAAAAATAGAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_465#0 GCCGGATATGTCTAGTATATCTCATTATCCCTTAAAGGTGATATTTGCAATTCATTTAGT 60
consensus_465#1 ---GGCCAAGCAAGAGGTGGATGTTTAGCC----ACAATGTTCACTACAAATCCTGCAAT 53
** * * * * *** ** * ** * * *** ** * * *
consensus_465#0 C--CTAGTAACATGGGGCATTCAGGGACATTGGTGTCCAAAATCTGTAATGTTTTACAAT 118
consensus_465#1 GGGTCAGTAATACATTGGATACAGATGTTTTGTAGGCCTGCAT---TGCTTCTTCAAAAT 110
***** * * ** *** *** * ** ** * * ** * ***
consensus_465#0 TTCCTTTTCTTCGTCTGCTT---ATTGTGGGCTATTCATA-ATATCGAATCAGATGAACC 174
consensus_465#1 TATGCTTTAAGTAGGTGCATGAAATCATTTTTCAAATATGCATATTAGATTGCATAATTG 170
* *** *** * ** * * ** **** ** ** *
consensus_465#0 TCTACAATTTGCACTTTTTATAAATGTACTTTCCATATTTTTTGATGTAGTAACATTAGC 234
consensus_465#1 TTTTAAATTATTGATATAGGAATATTTATTTTTCATCATAATGCTTGTCACGAGAAGGAT 230
* * **** * * * ** ** *** *** * * *** * *
consensus_465#0 AGTCTATTTTCCAACAACGTATGCATCTGAGAAGTTTAGTGCAGCGATTATGATCTTAAA 294
consensus_465#1 AG---ATTCGTTTGTGATGCACGAATTTTACGTAT------CAGTCATCTTGAAATGTTT 281
** *** * * * * ** * * * *** ** *** *
consensus_465#0 CATGATTGCTCGCATCATCACAAGCATATATCTTCTACGAATA--GGCCAAGCAAGAGGT 352
consensus_465#1 TATG-TTGTTT-TATCGTCTTTTGTACATATGATTTATAATTTTTAGCGGGGGTGGGGAC 339
*** *** * *** ** * * **** * ** * * ** * * *
consensus_465#0 GGATGTTTAGCCACAATGTTCACTACAAATCCTGCAATGGGCTTTGGTCGACAGGATTAC 412
consensus_465#1 AGACGTTCATA---AACGTTT--------TTCTATTCTAGGCTTTGGTCGACAGGATTAC 388
** *** * ** *** * ** * *********************
consensus_465#0 GAGGACATATCTCATCCGATTCCACAAAATTCCGATTTTGCTGGAGTTTAAAAATAGAAC 472
consensus_465#1 GAGGACATATCTCATCCGATTCCACAAAATTCCGATTTTGCTGGAGTTTAAAAATAGAAC 448
************************************************************
consensus_465#0 ATGACGTTTCTAAAATTCGATACGTCGAAAATTACGCGATTTCATTATCGAATCTCTCGT 532
consensus_465#1 ------------------------------------------------------------
consensus_465#0 AGCTCGTAAGAAGTACGCGCATCTATAATCATGACATTAAAATCTATTTTATTTATTGTA 592
consensus_465#1 ------------------------------------------------------------
consensus_465#0 TATATCAGGATTTTCAATATCGATTAACAATGCAAAATAGAAAGAAATTTATGTATATAA 652
consensus_465#1 ------------------------------------------------------------
consensus_465#0 ACATGCAAATAACATTATATATCAAAACGTGAAAACGCAAAGAAATATAGAATAATAATA 712
consensus_465#1 ------------------------------------------------------------
consensus_465#0 ACAACAACAACAACAATAAAAAAAAA 738
consensus_465#1 --------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |