These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_468#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1122 fasta sequence [AAAAGAAAAAGGGGGGGAGAAAAAAAAAAAGAAACAAAATTCCTTTAACCCTTTAAACCGTTGCCGTTTAATAATAATATAGTTGGAGGAACGGAAAGAAGAAGGAGGAAAAAAAACGAGAGAGAGGAAAGATCGTTAGGACGAGGGGAGGAGTACAGATTAAGGATTAAGAAAGAAATGAACGGGAAGATCGACGACGGTTTAACAAGTATAACGAGGTACGAAGTAATCCCATCTGATTTGCCTATCTATGATCCCACCGTGCTTTAGACCTTCGTAACCATCCCTCCTCCTCCTCGCCTATTCTTAACCTCCATGCTTCGTCTCTTTCGGTTTTAAGCACGATCCGATGCTTCGTACATGCCCCGCTACTTCCTCTGTTTCGTCGCTCGAAATCGCCCTTTGATAGCCGCCCTCTCCCTCTCTCTTTCTCTCTCTTTCTCTCTCTCTCTCTGTCCCCCGGTATTTGCACGATATTTTTTTCAATAATGAAACTGTCTCATCATACGGGAGCGCGTGCAGAATACGAGTATGAGTTCGCGACGAAACCCATAGGATTTAGACGAGTGAACCGAATAGAGCTGATAGAGAAACGTAGGGAATAAAGAGGGACGAGTGTGAAAGAAGGGGGACGAGCGAGATGAGGAGAGAGAAAAAACGGGAGAGTGGGGGAGAGGGAGGCGGACGACTTTGTTATTAATCAAAAGATAGACGGATCGTGCTTTAAACGAATCAAAAGCGTTTCGAATCAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGAAAAAAAGGGGAGGGGGAAAAAAGAAGAAGAAGAAGAAGAAGAGAAGAAAACGCGATGATCAAAGAACGATACAGGGGAGGGAACGTTTGCGAGACGTTGCCAGACGTTGAAGAGAACACATATTTGTGCATCGAGTGCACAATAGAATTACGAGAGAATCGACGAAATCAAACCCGCTTGGGACAAACGTAGCGTTTAGGAATTTATCAGTAAATTTAAAAATAATAATTTCCCGAAAAAAAACGATTCGATTACCCGTAGTACGTGGATATGGATATAAAAGNNGTGCCTTCAGTCCATCTCGCGGACCACAAATATTTCGTGCCATTAATTCCT] [+] EMBL BI515258 [AAAAGAAAAAGGGGGGGAGAAAAAAAAAAAGAAACAAAATTCCTTTAACCCTTTAAACCGTTGCCGTTTAATAATAATATAGTTGGAGGAACGGAAAGAAGAAGGAGGAAAAAAAACGAGAGAGAGGAAAGATCGTTAGGACGAGGGGAGGAGTACAGATTAAGGATTAAGAAAGAAATGAACGGGAAGATCGACGACGGTTTAACAAGTATAACGAGGTACGAAGTAATCCCATCTGATTTGCCTATCTATGATCCCACCGTGCTTTAGACCTTCGTAACCATCCCTCCTCCTCCTCGCCTATTCTTAACCTCCATGCTTCGTCTCTTTCGGTTTTAAGCACGATCCGATGCTTCGTACATGCCCCGCTACTTCCTCTGTTTCGTCGCTCGAAATCGCCCTTTGATAGCCGCCCTCTCCCTCTCTCTTTCTCTCTCTT ] [+] EMBL BI506118 [ AGATTAAGGATTAAGAAAGAAATGAACGGGAAGATCGACGACGGTTTAACAAGTATAACGAGGTACGAAGTAATCCCATCTGATTTGCCTATCTATGATCCCACCGTGCTTTAGACCTTCGTAACCATCCCTCCTCCTCCTCGCCTATTCTTAACCTCCATGCTTCGTCTCTTTCGGTTTTAAGCACGATCCGATGCTTCGTACATGCCCCGCTACTTCCTCTGTTTCGTCGCTCGAAATCGCCCTTTGATAGCCGCCCTCTCCCTCTCTCTTTCTCTCTCTTTCTCTCTCTCTCTCTGTCCCCCGGTATTTGCACGATATTTTTTTCAATAATGAAACTGTCTCATCATACGGGAGCGCGTGCAGAATACGAGTATGAGTTCGCGACGAAACCCATAGGATTTAGACGAGTGAACCGAATAGAGCTGATAGAGAAACGTAGGGAATAAAGAGGGACGAGTGTGAAAGAAGGGGGACGAGCGAGATGAGGAGAGAGAAAAAACGGGAG ] [+] EMBL BI511781 [ TATGAGTTCGCGACGAAACCCATAGGATTTAGACGAGTGAACCGAATAGAGCTGATAGAGAAACGTAGGGAATAAAGAGGGACGAGTGTGAAAGAAGGGGGACGAGCGAGATGAGGAGAGAGAAAAAACGGGAGAGTGGGGGAGAGGGAGGCGGACGACTTTGTTATTAATCAAAAGATAGACGGATCGTGCTTTAAACGAATCAAAAGCGTTTCGAATCAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGGAAAAAAAGGGGAGGGGGAAAAAAGAAGAAGAAGAAGAAGAAGAGAAGAAAACGCGATGATCAAAGAACGATACAGGGGAGGGAACGTTTGCGAGACGTTGCCAGACGTTGAAGAGAACACATATTTGTGCATCGAGTGCACAATAGAATTACGAGAGAATCGACGAAATCAAACCCGCTTGGGACAAACGTAGCGTTTAGGAATTTATCAGTAAATTTAAAAATAATAATTTCCCGAAAAAAAACGATTCGATTACCCGTAGTACGTGGATATGGATATAAAAGNNGTGCCTTCAGTCCATCTCGCGGACCACAAATATTTCGTGCCATTAATTCCT] consensusID : consensus_468#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 501 fasta sequence [TAACCATCCCTCCTCCTCCTCGCCTATTCTTAACCTCCATGCTTCGTCTCTTTCGGTTTTAAGCACGATCCGATGCTTCGTACATGCCCCGCTACTTCCTCTGTTTCGTCGCTCGAAATCGCCCTTTGATAGCCTCCCTCTCCCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTGTCCCCCGGTATTTGCACGATATTTTTTTCAATAATGAAACTGTCTCATCATACGGGAGCGCGTGCAGAATACGAGTATGAGTTCGCGACGAAACCCATAGGATTTAGACGAGTGAACCGAATAGAGCTGATAGAGAAACGTGGGGAATAGAGAGGGACGAGTGTGAAAGAAGGACACGTGAAAGAAGGGGGACGAGCGAGACGAGGAGAGAGAAAGAACGGGAGAGTGGGGGAGAGGGAGGCGGACGACTTTGTTATTAATCAAAAGATAGACGGATCGTGCTTTAAACGAATCAAAAGCGTTTCGAATCAAAAAAAGAAAGAAAGA] [+] EMBL BI513341 [TAACCATCCCTCCTCCTCCTCGCCTATTCTTAACCTCCATGCTTCGTCTCTTTCGGTTTTAAGCACGATCCGATGCTTCGTACATGCCCCGCTACTTCCTCTGTTTCGTCGCTCGAAATCGCCCTTTGATAGCCTCCCTCTCCCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTGTCCCCCGGTATTTGCACGATATTTTTTTCAATAATGAAACTGTCTCATCATACGGGAGCGCGTGCAGAATACGAGTATGAGTTCGCGACGAAACCCATAGGATTTAGACGAGTGAACCGAATAGAGCTGATAGAGAAACGTGGGGAATAGAGAGGGACGAGTGTGAAAGAAGGACACGTGAAAGAAGGGGGACGAGCGAGACGAGGAGAGAGAAAGAACGGGAGAGTGGGGGAGAGGGAGGCGGACGACTTTGTTATTAATCAAAAGATAGACGGATCGTGCTTTAAACGAATCAAAAGCGTTTCGAATCAAAAAAAGAAAGAAAGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_468#0 AAAAGAAAAAGGGGGGGAGAAAAAAAAAAAGAAACAAAATTCCTTTAACCCTTTAAACCG 60 consensus_468#1 ------------------------------------------------------------ consensus_468#0 TTGCCGTTTAATAATAATATAGTTGGAGGAACGGAAAGAAGAAGGAGGAAAAAAAACGAG 120 consensus_468#1 ------------------------------------------------------------ consensus_468#0 AGAGAGGAAAGATCGTTAGGACGAGGGGAGGAGTACAGATTAAGGATTAAGAAAGAAATG 180 consensus_468#1 ------------------------------------------------------------ consensus_468#0 AACGGGAAGATCGACGACGGTTTAACAAGTATAACGAGGTACGAAGTAATCCCATCTGAT 240 consensus_468#1 ------------------------------------------------------------ consensus_468#0 TTGCCTATCTATGATCCCACCGTGCTTTAGACCTTCGTAACCATCCCTCCTCCTCCTCGC 300 consensus_468#1 -------------------------------------TAACCATCCCTCCTCCTCCTCGC 23 *********************** consensus_468#0 CTATTCTTAACCTCCATGCTTCGTCTCTTTCGGTTTTAAGCACGATCCGATGCTTCGTAC 360 consensus_468#1 CTATTCTTAACCTCCATGCTTCGTCTCTTTCGGTTTTAAGCACGATCCGATGCTTCGTAC 83 ************************************************************ consensus_468#0 ATGCCCCGCTACTTCCTCTGTTTCGTCGCTCGAAATCGCCCTTTGATAGCCGCCCTCTCC 420 consensus_468#1 ATGCCCCGCTACTTCCTCTGTTTCGTCGCTCGAAATCGCCCTTTGATAGCCTCCCTCTCC 143 *************************************************** ******** consensus_468#0 CTCTCTCTTTCTCTCTCTTTCTCTCTCTCTCTCTGTCCCCCGGTATTTGCACGATATTTT 480 consensus_468#1 CTCTCTCTTTCTCTCTC----TCTCTCTCTCTCTGTCCCCCGGTATTTGCACGATATTTT 199 ***************** *************************************** consensus_468#0 TTTCAATAATGAAACTGTCTCATCATACGGGAGCGCGTGCAGAATACGAGTATGAGTTCG 540 consensus_468#1 TTTCAATAATGAAACTGTCTCATCATACGGGAGCGCGTGCAGAATACGAGTATGAGTTCG 259 ************************************************************ consensus_468#0 CGACGAAACCCATAGGATTTAGACGAGTGAACCGAATAGAGCTGATAGAGAAACGTAGGG 600 consensus_468#1 CGACGAAACCCATAGGATTTAGACGAGTGAACCGAATAGAGCTGATAGAGAAACGTGGGG 319 ******************************************************** *** consensus_468#0 AATAAAGAGGGACGAGTGTGAAAGAAGG---------------GGGACGAGCGAGATGAG 645 consensus_468#1 AATAGAGAGGGACGAGTGTGAAAGAAGGACACGTGAAAGAAGGGGGACGAGCGAGACGAG 379 **** *********************** ************* *** consensus_468#0 GAGAGAGAAAAAACGGGAGAGTGGGGGAGAGGGAGGCGGACGACTTTGTTATTAATCAAA 705 consensus_468#1 GAGAGAGAAAGAACGGGAGAGTGGGGGAGAGGGAGGCGGACGACTTTGTTATTAATCAAA 439 ********** ************************************************* consensus_468#0 AGATAGACGGATCGTGCTTTAAACGAATCAAAAGCGTTTCGAATCAAAAAAAGAAAGAAA 765 consensus_468#1 AGATAGACGGATCGTGCTTTAAACGAATCAAAAGCGTTTCGAATCAAAAAAAGAAAGAAA 499 ************************************************************ consensus_468#0 GAAAGAAAGAAAGAAAAAGGAAAAAAAGGGGAGGGGGAAAAAAGAAGAAGAAGAAGAAGA 825 consensus_468#1 GA---------------------------------------------------------- 501 ** consensus_468#0 AGAGAAGAAAACGCGATGATCAAAGAACGATACAGGGGAGGGAACGTTTGCGAGACGTTG 885 consensus_468#1 ------------------------------------------------------------ consensus_468#0 CCAGACGTTGAAGAGAACACATATTTGTGCATCGAGTGCACAATAGAATTACGAGAGAAT 945 consensus_468#1 ------------------------------------------------------------ consensus_468#0 CGACGAAATCAAACCCGCTTGGGACAAACGTAGCGTTTAGGAATTTATCAGTAAATTTAA 1005 consensus_468#1 ------------------------------------------------------------ consensus_468#0 AAATAATAATTTCCCGAAAAAAAACGATTCGATTACCCGTAGTACGTGGATATGGATATA 1065 consensus_468#1 ------------------------------------------------------------ consensus_468#0 AAAGNNGTGCCTTCAGTCCATCTCGCGGACCACAAATATTTCGTGCCATTAATTCCT 1122 consensus_468#1 --------------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |