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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_49#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 739 fasta sequence
[AGAGAAGAGGTACCTTTCTTCAAATTTTCGTATAATATTCTTCAAACTACTGTGATCAATTGGTTCGAAAAAATGCCGCGCGGTAAATATGTCAGTTACAAAGGCCGGAGTCGTCACTTCACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGG--AAAAAAAACTCCAATGGAGAAAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGATTCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCTGAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGAGTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGACTCAGCAAAACCAGATTTATCTCGGAGAGAACGAGAACAATTAGAAAGACAAAGAGCATATGCAAACTACCAGAAATTACATGCAGCAGGTAAAACGGATGAAGCACGTGCGGATTTAGCACGATTAGCTATAGTTAAACAACAACGAGAAGAAGCGGCTAGGAAACGAGAAGCCGAGAAGAAACAGAAGGAGCTTGCCCTACAGAGAAAAACGGAACTTANNCNAAAAGCACTCGGCAAAAAATCCTANNACGTTTCATTTTGATCAATTATAAAATATTTGATGTCACAGCAATTATTACATTAACAATGATGAACAGTTTAAAATCTAC]
[+] EMBL BI512787 [AGAGAAGAGGTACCTTTCTTCAAATTTTCGTATAATATTCTTCAAACTACTGTGATCAATTGGTTCGAAAAAATGCCGCGCGGTAAATATGTCAGTTACAAAGGCCGGAGTCGTCACTTCACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGG AAAAAAAACTCCAATGGAGAAAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGATTCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCTGAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGAGTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGATTCAGCAAAACCAGATTTATCTCGGAGAGAACGAGAACAATTNNAAAGACAAAGAGCATATGCAAACTACCAGAAATTACATGCAGCAGGTAAAACGGATGAAGCACGTGCGGATTTA ]
[+] EMBL BI515996 [ AATTTTCGTATAATATTCTTCAAACTACTGTGATCAATTGGTTCGAAAAAATGCCGCGCGGTAAATATGTCAGTTACAAAGGCCGGAGTCGTCACTTCACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGG AAAAAAAACTCCAATGGAGAAAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGATTCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCTGAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGAGTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGACTCAGCAAAACCAGATTTATCTCGGAGAGAACGAGAACAATTAGAAAGACAAAGAGCATATGCAAACTACCAGAAATTACATGCAGCAGGTAAAACGGATGAAGCACGTGCGGATTTAGCACGATTAG ]
[+] EMBL BI505615 [ CGGTAAATATGTCAGTTACAAAGGCCGGAGTCGTCACTTCACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGGAAAAAAAAAACTCCAATGGAGAAAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGATTCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCTGAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGAGTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGACTCAGCAAAACCAGATTTATCTCGGAGAGAACGAGAACAATTAGAAAGACAAAGAGCATATGCAAACTACCAGAAATTACATGCAGCAGGTAAAACGGATGAAGCACGTGCGGATTTAGCACGATTAGCTATAGTTAAACAACAACGAGAAGAAGCGGCTAGGAAACGAGAAGCCGAGAAGAAACAGAAGGAGCTTGCCCTACAGAGAAAAACGGAACTTAGGCAAAAAGCA ]
[+] EMBL BI505884 [ TCAGTTACAAAGGCCGGAGTCGTCACTTCACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGG AAAAAAAACTCCAATGGAGAAAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGATTCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCTGAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGAGTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGACTCAGCAAAACCAGATTTATCTCGGAGAGAACGAGAACAATTAGAAAGACAAAGAGCATATGCAAACTACCAGAAATTACATGCAGCAGGTAAAACGGATGAAGCACGTGCGGATTTAGCACGATTAGCTATAGTTAAACAACAACGAGAAGAAGCGGCTAGGAAACGAGAAGCCGAGAAGAAACAGAAGGAGCTTGCCCTACAGAGAAAAACGGAACTTANNCNAAAAGCACTCGGCAAAAAATCCTANNACGTTTCATTTTGATCAATTATAAAATATTTGATGTCACAGCAATTATTACATTAACAATGATGAACAGTTTAAAATCTAC]
[+] EMBL BI515289 [ CAGTTACAAAGGCCGGAGTCGTCACTTCACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGG AAAAAAAACTCCAATGGAGAAAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGATTCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCTGAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGAGTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGACTCAGCAAAACCAGATTTATCTCGGAGAGAACGAGAACAATTAGAAAGACAAAGAGCATATGCAAACTACCAGAAATTACATGCAGCAGGTAAAACGGATGAAGCACGTGCGGATTTAGCACGATTAGCTATAGTTAAACAACAACGAGAAGAAGCGGC ]
[+] EMBL BI515581 [ TTACAAAGGCCGGAGTCGTCACTTCACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGG AAAAAAAACTCCAATGGAGAAAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGATTCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCTGAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGAGTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGACTCAGCAAAACCAGATTTATCTCGGAGAGAACGAGAACAATTAGAAAGACAAAGAGCATATGCAAACTACCAGAAATTACATGCAGCAGGTAAAACGGATGAAGCACGTGCGGATTTAGCACGATTAGCTATAGTTAAACAACAACGAGAAGAAG ]
[+] EMBL BI504353 [ ACTTCACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGG AAAAAAAACTCCAATGGAGAAAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGATTCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCTGAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGAGTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGACTCAGCAAAACCAGATTTATCTCGGAGAGAACGAGAACAATTAGAAAGACAAAGAGCATATGCAAACTACCAGAAATTACATGCAGCAGGTAAAACGGATGAAGCACGTGCGG ]
[+] EMBL BI514451 [ ACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGG AAAAAAAACTCCAATGGAGAAAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGATTCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCTGAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGAGTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGATTCAGCAAAACCAGATTTATCTCGGAGAGAACGAGAACAATTAGAAAGACAAAGAGCATATGCAAACTACCAGAAATTACATGCAGCAGGTAAAACGGATGAAGCACGTGCGGATTTAGCACGATTAGCTATAGTTAAAC ]
consensusID : consensus_49#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 512 fasta sequence
[ATCAATTGGTTCGAAAAAATGCCGCGCGGTAAATATGTCAGTTACAAAGGCCGGAGTCGTCACTTCACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGGAAAAAAAACTCCAATGGAGAAAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGATTCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCTGAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGAGTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGACTCAGCAAAACCAGATTTATCTCGGAGAGAACGAGAACAATTAGAAAGACAAAGAGCATATGCAAACTACCAGAAATTACATGCAACAAGGAAACGATCTCTCCTAGAAAAAAGAAAAAAAAAAAAAAAAAGNAACGGGATAATATTCAAACGCATAGA]
[+] EMBL BI514414 [ATCAATTGGTTCGAAAAAATGCCGCGCGGTAAATATGTCAGTTACAAAGGCCGGAGTCGTCACTTCACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGGAAAAAAAACTCCAATGGAGAAAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGATTCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCTGAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGAGTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGACTCAGCAAAACCAGATTTATCTCGGAGAGAACGAGAACAATTAGAAAGACAAAGAGCATATGCAAACTACCAGAAATTACATGCAACAAGGAAACGATCTCTCCTAGAAAAAAGAAAAAAAAAAAAAAAAAGNAACGGGATAATATTCAAACGCATAGA]
[+] EMBL BI514440 [ATCAATTGGTTCGAAAAAATGCCGCGCGGTAAATATGTCAGTTACAAAGGCCGGAGTCGTCACTTCACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGGAAAAAAAACTCCAATGGAGAAAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGATTCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCTGAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGAGTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGACTCAGCAAAACCAGATTTATCTCGGAGAGAACGAGAACAATTAGAAAGACAAAGAGCATATGCAAACTACCAGAAATTACATGCAACAAG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_49#0 AGAGAAGAGGTACCTTTCTTCAAATTTTCGTATAATATTCTTCAAACTACTGTGATCAAT 60
consensus_49#1 ------------------------------------------------------ATCAAT 6
******
consensus_49#0 TGGTTCGAAAAAATGCCGCGCGGTAAATATGTCAGTTACAAAGGCCGGAGTCGTCACTTC 120
consensus_49#1 TGGTTCGAAAAAATGCCGCGCGGTAAATATGTCAGTTACAAAGGCCGGAGTCGTCACTTC 66
************************************************************
consensus_49#0 ACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGGAAAAAAAACTCCAATGGAGA 180
consensus_49#1 ACTAACCCCGAGGAACTGGAGGAGCAACGACGCCAGGAGGAAAAAAAACTCCAATGGAGA 126
************************************************************
consensus_49#0 AAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGAT 240
consensus_49#1 AAAAATAAAGGAAAGGATAGCTCTAGTGATGAGGATGAGGAACCCAAAGCACATGGTGAT 186
************************************************************
consensus_49#0 TCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCT 300
consensus_49#1 TCAATAAAAAATCATAGTTCTTCAGGGACAGATACTGAAAGTGAATCAGAATCAGAATCT 246
************************************************************
consensus_49#0 GAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGA 360
consensus_49#1 GAAACTGAAGGAAAAACAAAGGGTGTAGAAAATTTAATTCAAGTTGAAAATCCAAATAGA 306
************************************************************
consensus_49#0 GTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGACTCAGCAAAACCA 420
consensus_49#1 GTTCAAAAAAAGGCAAAAAAATTATCGCAATTAAATCAATCTCTAGACTCAGCAAAACCA 366
************************************************************
consensus_49#0 GATTTATCTCGGAGAGAACGAGAACAATTAGAAAGACAAAGAGCATATGCAAACTACCAG 480
consensus_49#1 GATTTATCTCGGAGAGAACGAGAACAATTAGAAAGACAAAGAGCATATGCAAACTACCAG 426
************************************************************
consensus_49#0 AAATTACATGCAGCAGGTAAAACGGATGAAGCACGTGCGGATTTAGCACGATTAGCTATA 540
consensus_49#1 AAATTACATGCAACAAGGAAA------------CGATCTCTCCTAGAAAAA--------A 466
************ ** * *** ** * *** * * *
consensus_49#0 GTTAAACAACAACGAGAAGAAGCGGCTAGGAAACGAGAAGCCGAGAAGAAACAGAAGGAG 600
consensus_49#1 GAAAAAAAAAAAAAAAAAGNAACGGGATAATATTCAAACGCATAGA-------------- 512
* *** ** ** * *** * *** * * * ** ***
consensus_49#0 CTTGCCCTACAGAGAAAAACGGAACTTANNCNAAAAGCACTCGGCAAAAAATCCTANNAC 660
consensus_49#1 ------------------------------------------------------------
consensus_49#0 GTTTCATTTTGATCAATTATAAAATATTTGATGTCACAGCAATTATTACATTAACAATGA 720
consensus_49#1 ------------------------------------------------------------
consensus_49#0 TGAACAGTTTAAAATCTAC 739
consensus_49#1 -------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |