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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_509#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 597 fasta sequence
[CAGTTACTTGTGAGTGTTTTAGTCAAATTTCGTGTATATTTTCTCCTTTTTTAAATGAATATTTGAAAGAAATAAAAAAAATGCAGACTATTAAATGCGTTGTAGTTGGAGATGGTGCAGTAGGTAAAACATGTCTGTTGATTTCATATACTACCAATAAGTTTCCATCCGAATATGTTCCAACAGTATTTGACAATTATGCTGTAACTGTTATGATTGGTGGTGAACCATATACTTTAGGATTATTTGATACAGCAGGTCAAGAAGATTATGACCGATTACGTCCTTTGAGTTATCCTCAAACTGACGTATTTCTTGTTTGTTTTTCGGTTGTATCTCCATCATCTTTTGAAAATGTTAAGGAAAAGTGGGTTCCAGAAATAACTCATCATTGCCAAAAAACTCCATTTTTGCTAGTTGGTACTCAAATTGATTTGAGAGATGATGCAGCAACTATTGAAAAACTTGCAAAAAATAAACAAAAGCCTATATCGGCTGAACAAGGTGAAAAACTCGCCAAGGAACTCAAAGCAGTGAAATATGTGGAATGTAGTGCTCTTACACAAAAAGGTTTAAAAAACGTATTCGACGAAGCAA]
[+] EMBL BI507592 [CAGTTACTTGTGAGTGTTTTAGTCAAATTTCGTGTATATTTTCTCCTTTTTTAAATGAATATTTGAAAGAAATAAAAAAAATGCAGACTATTAAATGCGTTGTAGTTGGAGATGGTGCAGTAGGTAAAACATGTCTGTTGATTTCATATACTACCAATAAGTTTCCATCCGAATATGTTCCAACAGTATTTGACAATTATGCTGTAACTGTTATGATTGGTGGTGAACCATATACTTTAGGATTATTTGATACAGCAGGTCAAGAAGATTATGACCGATTACGTCCTTTGAGTTATCCTCAAACTGACGTATTTCTTGTTTGTTTTTCGGTTGTATCTCCATCATCTTTTGAAAATGTTAAGGAAAAGTGGGTTCCAGAAATAACTCATCATTGCCAAAAAACTCCATTTTTGCTAGTTGGTACTCAAATTGATTTGAGAGATGATGCAGCAACTATTGAAAAACTTGCAAAAAATAAACAAAAGCCTATATCGGCTGAACAAGGTGAAAAACTCGCCAAGGAACTCAAAGCAGTGAAATATGTGGAATGTAGTGCTCTTACACAAAAAGGTTTAAAAAACGTATTCGACGAAGCAA]
consensusID : consensus_509#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 596 fasta sequence
[ACCAAAAATGGCGATCTGAAAAACAATTATTTCATCACAAATCTATCTCTGAATATTTGAAAGAAATAAAAAAAATGCAGACTATTAAATGCGTTGTAGTTGGAGATGGTGCAGTAGGTAAAACATGTCTGTTGATTTCATATACTACCAATAAGTTTCCATCCGAATATGTTCCAACAGTATTTGACAATTATGCTGTAACTGTTATGATTGGTGGTGAACCATATACTTTAGGATTATTTGATACAGCAGGTCAAGAAGATTATGACCGATTACGTCCTTTGAGTTATCCTCAAACTGACGTATTTCTTGTTTGTTTTTCGGTTGTATCTCCATCATCTTTTGAAAATGTTAAGGAAAAGTGGGTTCCAGAAATAACTCATCATTGCCAAAAAACTCCATTTTTGCTAGTTGGTACTCAAATTGATTTGAGAGATGATGCAGCAACTATTGAAAAACTTGCAAAAAATAAACAAAAGCCTATATCGGCTGAACAAGGTGAAAAACTCGCCAAGGAACTCAAAGCAGTGAAATATGTGGAATGTAGTGCTCTTACACAAAAAGGTTTAAAAAACGTATTCGACGAAGCAATTTTA]
[+] EMBL BI505421 [ACCAAAAATGGCGATCTGAAAAACAATTATTTCATCACAAATCTATCTCTGAATATTTGAAAGAAATAAAAAAAATGCAGACTATTAAATGCGTTGTAGTTGGAGATGGTGCAGTAGGTAAAACATGTCTGTTGATTTCATATACTACCAATAAGTTTCCATCCGAATATGTTCCAACAGTATTTGACAATTATGCTGTAACTGTTATGATTGGTGGTGAACCATATACTTTAGGATTATTTGATACAGCAGGTCAAGAAGATTATGACCGATTACGTCCTTTGAGTTATCCTCAAACTGACGTATTTCTTGTTTGTTTTTCGGTTGTATCTCCATCATCTTTTGAAAATGTTAAGGAAAAGTGGGTTCCAGAAATAACTCATCATTGCCAAAAAACTCCATTTTTGCTAGTTGGTACTCAAATTGATTTGAGAGATGATGCAGCAACTATTGAAAAACTTGCAAAAAATAAACAAAAGCCTATATCGGCTGAACAAGGTGAAAAACTCGCCAAGGAACTCAAAGCAGTGAAATATGTGGAATGTAGTGCTCTTACACAAAAAGGTTTAAAAAACGTATTCGACGAAGCAATTTTA]
consensusID : consensus_509#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 568 fasta sequence
[TGTTGGAGCGGCCGCGTTGCTTGAATATTTGAAAGAAATAAAAAAAATGCAGACTATTAAATGCGTTGTAGTTGGAGATGGTGCAGTAGGTAAAACATGTCTGTTGATTTCATATACTACCAATAAGTTTCCATCCGAATATGTTCCAACAGTATTTGACAATTATGCTGTAACTGTTATGATTGGTGGTGAACCATATACTTTAGGATTATTTGATACAGCAGGTCAAGAAGATTATGACCGATTACGTCCTTTGAGTTATCCTCAAACTGACGTATTTCTTGTTTGTTTTTCGGTTGTATCTCCATCATCTTTTGAAAATGTTAAGGAAAAGTGGGTTCCAGAAATAACTCATCATTGCCAAAAAACTCCATTTTTGCTAGTTGGTACTCAAATTGATTTGAGAGATGATGCAGCAACTATTGAAAAACTTGCAAAAAATAAACAAAAGCCTATATCGGCTGAACAAGGTGAAAAACTCGCCAAGGAACTCAAAGCAGTGAAATATGTGGAATGTAGTGCTCTTACACAAAAAGGTTTAAAAAACGTATTCGACGAAGCAATTTTA]
[+] EMBL BI506698 [TGTTGGAGCGGCCGCGTTGCTTGAATATTTGAAAGAAATAAAAAAAATGCAGACTATTAAATGCGTTGTAGTTGGAGATGGTGCAGTAGGTAAAACATGTCTGTTGATTTCATATACTACCAATAAGTTTCCATCCGAATATGTTCCAACAGTATTTGACAATTATGCTGTAACTGTTATGATTGGTGGTGAACCATATACTTTAGGATTATTTGATACAGCAGGTCAAGAAGATTATGACCGATTACGTCCTTTGAGTTATCCTCAAACTGACGTATTTCTTGTTTGTTTTTCGGTTGTATCTCCATCATCTTTTGAAAATGTTAAGGAAAAGTGGGTTCCAGAAATAACTCATCATTGCCAAAAAACTCCATTTTTGCTAGTTGGTACTCAAATTGATTTGAGAGATGATGCAGCAACTATTGAAAAACTTGCAAAAAATAAACAAAAGCCTATATCGGCTGAACAAGGTGAAAAACTCGCCAAGGAACTCAAAGCAGTGAAATATGTGGAATGTAGTGCTCTTACACAAAAAGGTTTAAAAAACGTATTCGACGAAGCAATTTTA]
[+] EMBL BI507682 [ GTTGGAGATGGTGCAGTAGGTAAAACATGTCTGTTGATTTCATATACTACCAATAAGTTTCCATCCGAATATGTTCCAACAGTATTTGACAATTATGCTGTAACTGTTATGATTGGTGGTGAACCATATACTTTAGGATTATTTGATACAGCAGGTCAAGAAGATTATGACCGATTACGTCCTTTGAGTTATCCTCAAACTGACGTATTTCTTGTTTGTTTTTCGGTTGTATCTCCATCATCTTTTGAAAATGTTAAGGAAAAGTGGGTTCCAGAAATAACTCATCATTGCCAAAAAACTCCATTTTTGCTAGTTGGTACTCAAATTGATTTGAGAGATGATGCAGCAACTATTGAAAAACTTGCAAAAAATAAACAAAAGCCTATATCGGCTGAACAAGGTGAAAAACTCGCCAAGGAACTCAAAGCAGTGAAATATGTGGAATGTAGTGCTCTTACACAAAAAGGTTTAAAAAACGTATTCGACGAAGCAATTTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_509#1 --ACCAAAAATGGCGATCTGAAAAACAATTATTTCATCACAAATCTATCTC----TGAAT 54
consensus_509#2 -----------------------------TGTTGGAGCGGCCGCGTTGCT-----TGAAT 26
consensus_509#0 CAGTTACTTGTGAGTGTTTTAGTCAAATTTCGTGTATATTTTCTCCTTTTTTAAATGAAT 60
* * * * *****
consensus_509#1 ATTTGAAAGAAATAAAAAAAATGCAGACTATTAAATGCGTTGTAGTTGGAGATGGTGCAG 114
consensus_509#2 ATTTGAAAGAAATAAAAAAAATGCAGACTATTAAATGCGTTGTAGTTGGAGATGGTGCAG 86
consensus_509#0 ATTTGAAAGAAATAAAAAAAATGCAGACTATTAAATGCGTTGTAGTTGGAGATGGTGCAG 120
************************************************************
consensus_509#1 TAGGTAAAACATGTCTGTTGATTTCATATACTACCAATAAGTTTCCATCCGAATATGTTC 174
consensus_509#2 TAGGTAAAACATGTCTGTTGATTTCATATACTACCAATAAGTTTCCATCCGAATATGTTC 146
consensus_509#0 TAGGTAAAACATGTCTGTTGATTTCATATACTACCAATAAGTTTCCATCCGAATATGTTC 180
************************************************************
consensus_509#1 CAACAGTATTTGACAATTATGCTGTAACTGTTATGATTGGTGGTGAACCATATACTTTAG 234
consensus_509#2 CAACAGTATTTGACAATTATGCTGTAACTGTTATGATTGGTGGTGAACCATATACTTTAG 206
consensus_509#0 CAACAGTATTTGACAATTATGCTGTAACTGTTATGATTGGTGGTGAACCATATACTTTAG 240
************************************************************
consensus_509#1 GATTATTTGATACAGCAGGTCAAGAAGATTATGACCGATTACGTCCTTTGAGTTATCCTC 294
consensus_509#2 GATTATTTGATACAGCAGGTCAAGAAGATTATGACCGATTACGTCCTTTGAGTTATCCTC 266
consensus_509#0 GATTATTTGATACAGCAGGTCAAGAAGATTATGACCGATTACGTCCTTTGAGTTATCCTC 300
************************************************************
consensus_509#1 AAACTGACGTATTTCTTGTTTGTTTTTCGGTTGTATCTCCATCATCTTTTGAAAATGTTA 354
consensus_509#2 AAACTGACGTATTTCTTGTTTGTTTTTCGGTTGTATCTCCATCATCTTTTGAAAATGTTA 326
consensus_509#0 AAACTGACGTATTTCTTGTTTGTTTTTCGGTTGTATCTCCATCATCTTTTGAAAATGTTA 360
************************************************************
consensus_509#1 AGGAAAAGTGGGTTCCAGAAATAACTCATCATTGCCAAAAAACTCCATTTTTGCTAGTTG 414
consensus_509#2 AGGAAAAGTGGGTTCCAGAAATAACTCATCATTGCCAAAAAACTCCATTTTTGCTAGTTG 386
consensus_509#0 AGGAAAAGTGGGTTCCAGAAATAACTCATCATTGCCAAAAAACTCCATTTTTGCTAGTTG 420
************************************************************
consensus_509#1 GTACTCAAATTGATTTGAGAGATGATGCAGCAACTATTGAAAAACTTGCAAAAAATAAAC 474
consensus_509#2 GTACTCAAATTGATTTGAGAGATGATGCAGCAACTATTGAAAAACTTGCAAAAAATAAAC 446
consensus_509#0 GTACTCAAATTGATTTGAGAGATGATGCAGCAACTATTGAAAAACTTGCAAAAAATAAAC 480
************************************************************
consensus_509#1 AAAAGCCTATATCGGCTGAACAAGGTGAAAAACTCGCCAAGGAACTCAAAGCAGTGAAAT 534
consensus_509#2 AAAAGCCTATATCGGCTGAACAAGGTGAAAAACTCGCCAAGGAACTCAAAGCAGTGAAAT 506
consensus_509#0 AAAAGCCTATATCGGCTGAACAAGGTGAAAAACTCGCCAAGGAACTCAAAGCAGTGAAAT 540
************************************************************
consensus_509#1 ATGTGGAATGTAGTGCTCTTACACAAAAAGGTTTAAAAAACGTATTCGACGAAGCAATTT 594
consensus_509#2 ATGTGGAATGTAGTGCTCTTACACAAAAAGGTTTAAAAAACGTATTCGACGAAGCAATTT 566
consensus_509#0 ATGTGGAATGTAGTGCTCTTACACAAAAAGGTTTAAAAAACGTATTCGACGAAGCAA--- 597
*********************************************************
consensus_509#1 TA 596
consensus_509#2 TA 568
consensus_509#0 --
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |