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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_541#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 779 fasta sequence
[CTGGCATTTATCATCACCTGGACACCGTACAATATTCTCGTTCTAATTAAATCCATCACAGCCTGCTCGTGGTACATCCCGCAAGAGCTCTGGGACTTTTTCTATTATCTTTGTTATATCAATAGTACTGTGAATCCAATGTGTTACGCCTTGTGCAATGCGGCATTCCGACGAACATACGTAAGGATTCTCAAGTGCAAGTGGCATAATAGAAACAGAGCCGCGATTGACAGAGGATGATATCAGTAGAAACGCCCAGCATGCGACATCTGCACGCTTATGGGCGTACTATTTTCTCTATCATTTTCTCTCTTCTCCTTTTTAATCATTCCTCCGAACGTGCTTGCCGATGATAGGGAAACTGAGTTGCTTTCAATTGTAATATAACCTATACTAATAAATGTTTACATTTCACGTGACATTTTCGTCACTTTCGCTCAACATTATTATGTATATCTTACTTTTGTTAATTGGAAATCAAACGTACGTATTTGTTNNAATTATACTATATCAATTTTATTACAAAATTATATTTCTCAGTTTTATTATTTAAAAATTTATTACATGAGCACTAATATTGGTCTTTAATCTTTTTTTTCATTTCGTTTCTATAGATATGGGTAACAAGAGAATAGTAGTTTTGAAAATATCATAAGAATCTTTTTTAAGATGAATAAACTTTCGAAAAATTATGATAAAATGATTTGTAATATAACATTTATACAAATCGAAAAACAGCTAAAAACATTATACTCAAAAATTTTGTTTCATAGATGTTA]
[+] EMBL BI505590 [CTGGCATTTATCATCACCTGGACACCGTACAATATTCTCGTTCTAATTAAATCCATCACAGCCTGCTCGTGGTACATCCCGCAAGAGCTCTGGGACTTTTTCTATTATCTTTGTTATATCAATAGTACTGTGAATCCAATGTGTTACGCCTTGTGCAATGCGGCATTCCGACGAACATACGTAAGGATTCTCAAGTGCAAGTGGCATAATAGAAACAGAGCCGCGATTGACAGAGGATGATATCAGTAGAAACGCCCAGCATGCGACATCTGCACGCTTATGGGCGTACTATTTTCTCTATCATTTTCTCTCTTCTCCTTTTTAATCATTCCTCCGAACGTGCTTGCCGATGATAGGGAAACTGAGTTGCTTTCAATTGTAATATAACCTATACTAATAAATGTTTACATTTCACGTGACATTTTCGTCACTTTCGCTCAACATTATTATGTATATCTTACTTTTGTTAATTGGAAATCAAACGTACGTATTTGTTNNAATTATACTATATCAATTTTATTACAAAATTATATTTCTCAGTTTTATTATTTAAAAATT ]
[+] EMBL BI503247 [ TTTTTTTTTTTTTAATCATTCCTCCGAACGTGCTTGCCGATGATAGGGAAACTGAGTTGCTTTCAATTGTAATATAACCTATACTAATAAATGTTTACATTTCACGTGACATTTTCGTCACTTTCGCTCAACATTATTATGTATATCTTACTTTTGTTAATTGGAAATCAAACGTACGTATTTGTTGTAATTATACTATATCAATTTTATTACAAAATTATATTTTTCAGTTTTATTATTTAAAAATTTATTACATGAGCACTAATATTGGTCTTTAATCTTTTTTTTCATTTCGTTTCTATAGATATGGGTAACAAGAGAATAGTAGTTTTGAAAATATCATAAGAATCTTTTTTAAGATGAATAAACTTTCGAAAAATTATGATAAAATGATTTGTAATATAACATTTATACAAATCGAAAAACAGCTAAAAACATTATACTCAAAAATTTTGTTTCATAGATGTTA]
consensusID : consensus_541#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 392 fasta sequence
[ATCTTGCTGGCATTTATCATCACCTGGACACCGTACAATATTCTCGTTCTAATTAAATCCATCACAGCCTGCTCGTGGTACATCCCGCAAGAGCTCTGGGACTTTTTCTATTATCTTTGTTATATCAATAGTACTGTGAATCCAATGTGTTACGCCTTGTGCAATGCGGCATTCCGACGAACATACGTAAGGATTCTCAAGTGCAAGTGGCATAATAGAAACAGAGCCGCGATTGACAGAGGATGATATCAGTAGAAACGCCCAGCATGCGACATCTGCACGCTTATGGGCGTACTATTTTCTCTATCATTTTCTCTCTTCTCCTTTTTAATCATTCCTCCGAACGTGCTTGCCGATGATAGGGAATAATTAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI506781 [ATCTTGCTGGCATTTATCATCACCTGGACACCGTACAATATTCTCGTTCTAATTAAATCCATCACAGCCTGCTCGTGGTACATCCCGCAAGAGCTCTGGGACTTTTTCTATTATCTTTGTTATATCAATAGTACTGTGAATCCAATGTGTTACGCCTTGTGCAATGCGGCATTCCGACGAACATACGTAAGGATTCTCAAGTGCAAGTGGCATAATAGAAACAGAGCCGCGATTGACAGAGGATGATATCAGTAGAAACGCCCAGCATGCGACATCTGCACGCTTATGGGCGTACTATTTTCTCTATCATTTTCTCTCTTCTCCTTTTTAATCATTCCTCCGAACGTGCTTGCCGATGATAGGGAATAATTAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI505520 [ATCTTGCTGGCATTTATCATCACCTGGACACCGTACAATATTCTCGTTCTAATTAAATCCATCACAGCCTGCTCGTGGTACATCCCGCAAGAGCTCTGGGACTTTTTCTATTATCTTTGTTATATCAATAGTACTGTGAATCCAATGTGTTACGCCTTGTGCAATGCGGCATTCCGACGAACATACGTAAGGATTCTCAAGTGCAAGTGGCATAATAGAAACAGAGCCGCGATTGACAGAGGATGATATCAGTAGAAACGCCCAGCATGCGACATCTGCACGCTTATGGGCGTACTATTTTCTCTATCATTTTCTCTCTTCTCCTTTTTAATCATTCCTCCGAACGTGCTTGCCGATGATAGGGAATAATTAAAAAAAAAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_541#0 ------CTGGCATTTATCATCACCTGGACACCGTACAATATTCTCGTTCTAATTAAATCC 54
consensus_541#1 ATCTTGCTGGCATTTATCATCACCTGGACACCGTACAATATTCTCGTTCTAATTAAATCC 60
******************************************************
consensus_541#0 ATCACAGCCTGCTCGTGGTACATCCCGCAAGAGCTCTGGGACTTTTTCTATTATCTTTGT 114
consensus_541#1 ATCACAGCCTGCTCGTGGTACATCCCGCAAGAGCTCTGGGACTTTTTCTATTATCTTTGT 120
************************************************************
consensus_541#0 TATATCAATAGTACTGTGAATCCAATGTGTTACGCCTTGTGCAATGCGGCATTCCGACGA 174
consensus_541#1 TATATCAATAGTACTGTGAATCCAATGTGTTACGCCTTGTGCAATGCGGCATTCCGACGA 180
************************************************************
consensus_541#0 ACATACGTAAGGATTCTCAAGTGCAAGTGGCATAATAGAAACAGAGCCGCGATTGACAGA 234
consensus_541#1 ACATACGTAAGGATTCTCAAGTGCAAGTGGCATAATAGAAACAGAGCCGCGATTGACAGA 240
************************************************************
consensus_541#0 GGATGATATCAGTAGAAACGCCCAGCATGCGACATCTGCACGCTTATGGGCGTACTATTT 294
consensus_541#1 GGATGATATCAGTAGAAACGCCCAGCATGCGACATCTGCACGCTTATGGGCGTACTATTT 300
************************************************************
consensus_541#0 TCTCTATCATTTTCTCTCTTCTCCTTTTTAATCATTCCTCCGAACGTGCTTGCCGATGAT 354
consensus_541#1 TCTCTATCATTTTCTCTCTTCTCCTTTTTAATCATTCCTCCGAACGTGCTTGCCGATGAT 360
************************************************************
consensus_541#0 AGGGAAACTGAGTTGCTTTCAATTGTAATATAACCTATACTAATAAATGTTTACATTTCA 414
consensus_541#1 AGGGAA--TAATTAAAAAAAAAAAAAAAAAAAAA-------------------------- 392
****** * * * ** ** * **
consensus_541#0 CGTGACATTTTCGTCACTTTCGCTCAACATTATTATGTATATCTTACTTTTGTTAATTGG 474
consensus_541#1 ------------------------------------------------------------
consensus_541#0 AAATCAAACGTACGTATTTGTTNNAATTATACTATATCAATTTTATTACAAAATTATATT 534
consensus_541#1 ------------------------------------------------------------
consensus_541#0 TCTCAGTTTTATTATTTAAAAATTTATTACATGAGCACTAATATTGGTCTTTAATCTTTT 594
consensus_541#1 ------------------------------------------------------------
consensus_541#0 TTTTCATTTCGTTTCTATAGATATGGGTAACAAGAGAATAGTAGTTTTGAAAATATCATA 654
consensus_541#1 ------------------------------------------------------------
consensus_541#0 AGAATCTTTTTTAAGATGAATAAACTTTCGAAAAATTATGATAAAATGATTTGTAATATA 714
consensus_541#1 ------------------------------------------------------------
consensus_541#0 ACATTTATACAAATCGAAAAACAGCTAAAAACATTATACTCAAAAATTTTGTTTCATAGA 774
consensus_541#1 ------------------------------------------------------------
consensus_541#0 TGTTA 779
consensus_541#1 -----
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |