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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_547#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 651 fasta sequence
[TTATTAGCGCGTGATGCACGCCAATGTTCGTAAGCCCGCGAAATCTGAGAAGACGCCGCGGCGCAAGAAGCTCGTAGAGCAACAAAGCAACGCTATGGATATGTTCGTGACACCAAAACGTCAGAAAAATGACGGTAATGGAAAAGATCAAAAGCCCGCTACTTCCAAAAAAACTATTCAACTAGGTCTACCCTCCGTTGTAGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGGTAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAAGTTGTTGGAACTCAACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGAACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTACTGGATTCTCTGCTTTGTGCACTGGGTCCTTTAATTTGTCTAACGCAACAGGTACCAGAAACTAATGGAGCTAAACACGAAACACTTTCGCAAATGCTTGACAATATTGCATATCTTATGCCTGGTTTGTAATATATGTATAAATACTCATAAAATAATTTAGTAATACATAATGTAAATATAAAAATTGAATAGATAAACATAGTCATTAAAATTATAAAATGAATGAATAATAG]
[+] EMBL BI505403 [TTATTAGCGCGTGATGCACGCCAATGTTCGTAAGCCCGCGAAATCTGAGAAGACGCCGCGGCGCAAGAAGCTCGTAGAGCAACAAAGCAACGCTATGGATATGTTCGTGACACCAAAACGTCAGAAAAATGACGGTAATGGAAAAGATCAAAAGCCCGCTACTTCCAAAAAAACTATTCAACTAGGTCTACCCTCCGTTGTAGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGGTAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAAGTTGTTGGAACTCAACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGAACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTACTGGATTCTCTGCTTTGTGCACTGGGTCCTTTAATTTGTCTAACGCAACAGGTACCAGAAACTAATGGAGCTAAACACGAAACACTTTCGCAAATGCTTGACAATATTGCATATCTTATGCCTGGTTTGTNATATATGTATAAATACTCATAAAATAATTTAGTAATACATAATCTAAATATAAAAATTGAAT ]
[+] EMBL BI509450 [ AGAAGACGCCGCGGCGCAAGAAGCTCGTAGAGCAACAAAGCAACGCTATGGATATGTTCGTGACACCAAAACGTCAGAAAAATGACGGTAATGGAAAAGATCAAAAGCCCGCTACTTCCAAAAAAACTATTCAACTAGGTCTACCCTCCGTTGTAGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGGTAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAAGTTGTTGGAACTCAACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGAACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTACTGGATTCTCTGCTTTGTGCACTGGGTCCTTTAATTTGTCTAACGCAACAGGTACCAGAAACTAATGGAGCTAAACACGAAACACTTTCGCAAATGCTTGACAATATTGCATATCTTATGCCTGGTTTGTAATATATGTATAAATACTCATAAAATAATTTAGTAATACATAATGTAAATATAAAAATTGAATAGATAAACATAGTCATTAAA ]
[+] EMBL BI503175 [ ctgcTTCGCGAAAAAAATTCATTAATAAAAT TGGTAATGGAAAAGATCAAAAGCCCGCTACTTCCAAAAAAACTATTCAACTAGGTCTACCCTCCGTTGTAGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGGTAAAGATTTGGTTAATGAACCAATGAT GAACAGGAATGTATAAAGTTGTTGGAACTCAACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGAACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTACTGGATTCTCTGCTTTGTGCACTGGGTCCTTTAATTTGTCTAACGCAACAGGTACCAGAAACTAATGGAGCTAAACACGAAACACTTTCGCAAATGCTTGACAATATTGCATATCTTATGCCTGGTTTGTAATATATGTATAAATACTCATAAAATAATTTAGTAATACATAATGTAAATATAAAAATTGAATAGATAAACATAGTCATTAAAATTATAAAATGAATGAATAATAG]
consensusID : consensus_547#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 257 fasta sequence
[CGCTATGGATATGTTCGTGACACCAAAACGTCAGAAAAATGACGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGGTAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAANNNGTTGGAACTCAACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGAACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTAC]
[+] EMBL BI508394 [CGCTATGGATATGTTCGTGACACCAAAACGTCAGAAAAATGACGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGGTAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAANNNGTTGGAACTCAACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGAACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_547#0 TTATTAGCGCGTGATGCACGCCAATGTTCGTAAGCCCGCGAAATCTGAGAAGACGCCGCG 60
consensus_547#1 ------------------------------------------------------------
consensus_547#0 GCGCAAGAAGCTCGTAGAGCAACAAAGCAACGCTATGGATATGTTCGTGACACCAAAACG 120
consensus_547#1 ------------------------------------------------------------
consensus_547#0 TCAGAAAAATGACGGTAATGGAAAAGATCAAAAGCCCGCTACTTCCAAAAAAACTATTCA 180
consensus_547#1 ---------------------------------------CGCTATGGATATGTTCGTGAC 21
** * * *
consensus_547#0 ACTAGGTCTACCCTCCGTTGTAGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGG 240
consensus_547#1 ACCAAAACGTCAGAAAAATGACGGAAATGTTCCGGTATCACCGCCATCGAATCGAAGTGG 81
** * * * ** **************************************
consensus_547#0 TAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAAGTTGTTGGAACTCA 300
consensus_547#1 TAAAGATTTGGTTAATGAACCAATGATAGGAACAGGAATGTATAAANNNGTTGGAACTCA 141
********************************************** ***********
consensus_547#0 ACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGA 360
consensus_547#1 ACCTATCGATGTAGCTGCGCATCTAAAACTTCTCGGTGAGAGTTTAACAATCATCGGTGA 201
************************************************************
consensus_547#0 ACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTACTGGA 420
consensus_547#1 ACGATTGAAGGAACATGATGGCCAAATAGCAGTATCAGGCAGTCTATCGGTTTTAC---- 257
********************************************************
consensus_547#0 TTCTCTGCTTTGTGCACTGGGTCCTTTAATTTGTCTAACGCAACAGGTACCAGAAACTAA 480
consensus_547#1 ------------------------------------------------------------
consensus_547#0 TGGAGCTAAACACGAAACACTTTCGCAAATGCTTGACAATATTGCATATCTTATGCCTGG 540
consensus_547#1 ------------------------------------------------------------
consensus_547#0 TTTGTAATATATGTATAAATACTCATAAAATAATTTAGTAATACATAATGTAAATATAAA 600
consensus_547#1 ------------------------------------------------------------
consensus_547#0 AATTGAATAGATAAACATAGTCATTAAAATTATAAAATGAATGAATAATAG 651
consensus_547#1 ---------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |