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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_556#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 879 fasta sequence
[TTTTAAATTAAAAAACGACTGGACCACTCGGACGATCGTCGAAGCGGTAGTAAACGGTGTTGTTCCTGGCGCTTCGACGCGAGCTCAAAGATGAAAACGTGATACATTAATTTTCGCTGATATAAATTAACGATTCGGCTCATGTCTGATGTAGTAGAACTGTAGTCATACGTACTCTCCAGTCAAGACAAAAGCAATACTCGAATATAGAATAATTTTTCATATGTAATGTCCATGAGTATATGTACAAATATTTGAACACCTTTATGTATGAAAACTTCGATAATTGACCATATTCGATGACAAGATTACACGTTGCGAGTGAAGTTTATTAACTCAATAAATGCTCAAAACTCATAAATATCAAATATGTAAAAGAGAGAAGGAAAAAATTAAAATTGATTCCATATCTAGAAAAGAAATAAAGAATAATTTTCTTTTTAGATTGATTTAACGAAAAAATTATGTATATACGTAAAATGATCCTTAATATGAGAAAAAATGTATTGAAAAATTATGTATTGAAAAATATACATTTTGAGTAAAGGAGAAATTAAATGTATATATACAATTCAATTCCAATGGAATGGAACGAAATGCTCAATGGCAATTAAAAAAGGATATGAGAGATTTGAGCATCTTGTTGAGTGTCATTGTCACAAAATTATCTACTTAAGCAATAACGCATTACCCCATGTAATAATCATTTAAAAAAAAAATGATTCCAGGTTCCCATGAAACTCGTTCTATGCATGGAATAACCTGATAATAAAAGGCCAACTATATAAAATGCGCGCGATCAATCGATCAGGATTGCTCAAGAAACTAGAAACGAGTCAATAACGAGTCAATAAAATTCGTAAGTCTCGTTAAGTTTAA]
[+] EMBL BI506406 [TTTTAAATTAAAAAACGACTGGACCACTCGGACGATCGTCGAAGCGGTAGTAAACGGTGTTGTTCCTGGCGCTTCGACGCGAGCTCAAAGATGAAAACGTGATACATTAATTTTCGCTGATATAAATTAACGATTCGGCTCATGTCTGATGTAGTAGAACTGTAGTCATACGTACTCTCCAGTCAAGACAAAAGCAATACTCGAATATAGAATAATTTTTCATATGTAATGTCCATGAGTATATGTACAAATATTTGAACACCTTTATGTATGAAAACTTCGATAATTGACCATATTCGATGACAAGATTACACGTTGCGAGTGAAGTTTATTAACTCAATAAATGCTCAAAACTCATAAATATCAAATATGTAAAAGAGAGAAGGAAAAAATTAAAATTGATTCCATATCTAGAAAAGAAATAAAGAATAATTTTCTTTTTAGATTGATTTAACGAAAAAATTATGTATATACGTAAAATGATCCTTAATATGAGAAAAAATGTATTGAAAAATTATGTATTGAAAAATATACATTTTGAGTAAAGGAGAAATTAAATGTATATATACAATTCAATTCCAATGGAATGGAACGAAATGCTCAATGGCAATTAAAAAAGGATATGAGAGATTTGAGCATCTTGTTGAGTGTCATTGTCACAAAATTATCTACTTAA ]
[+] EMBL BI503122 [ ATCGTCGAAGCGGTAGTAAACGGTGTTGTTCCTGGCGCTTCGACGCGAGCTCAAAGATGAAAACGTGATACATTAATTTTCGCTGATATAAATTAACGATTCGGCTCATGTCTGATGTAGTAGAACTGTAGTCATACGTACTCTCCAGTCAAGACAAAAGCAATACTCGAATATAGAATAATTTTTCATATGTAATGTCCATGAGTATATGTACAAATATTTGAACACCTTTATGTATGAAAACTTCGATAATTGACCATATTCGATGACAAGATTACACGTTGCGAGTGAAGTTTATTAACTCAATAAATGCTCAAAACTCATAAATATCAAATATGTAAAAGAGAGAAGGAAAAAATTAAAATTGATTCCATATCTAGAAAAGAAATAAAGAATAATTTTCTTTTTAGATTGATTTAACGAAAAAATTATGTATATACGTAAAATGATCCTTAATATGAGAAAAAATGTATTGAAAAATTATGTATTGAAAAATATACATTTTGAGTAAAGGAGAAATTAAATGTATATATACAATTCAATTCCAATGGAATGGAACGAAATGCTCAATGGCAATTAAAAAAGGATATGAGAGATT ]
[-] EMBL BI511486 [ AACTCATAAATATCAAATATGTAAAAGAGAGAAGGAAAAAATTAAAATTGATTCCATANCTAGAAAAGAAATAAAGAATAATTTTCTTTTTAGATTGATTTAACGAAAAAATTATGTATATACGTAAAATGATCCTTAATATGAGAAAAAATGTATTGAAAAATTATGTATTGAAAAATATACATTTTGAGTAAAGGAGAAATTAAATGTATATATACAATTCAATTCCAATGGAATGGAACGAAATGCTCAATGGCAATTAAAAAAGGATATGAGAGATTTGAGCATCTTGTTGAGTGTCATTGTCACAAAATTATCTACTTAAGCAATAACGCATTACCCCATGTAATAATCATTTAAAAAAAAAATGATTCCAGGTTCCCATGAAACTCGTTCTATGCATGGAATAACCTGATAATAAAAGGCCAACTATATAAAATGCGCGCGATCAATCGATCAGGATTGCTCAAGAAACTAGAAACGAGTCAATAACGAGTCAATAAAATTCGTAAGTCTCGTTAAGTTTAA]
consensusID : consensus_556#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 508 fasta sequence
[CGCTTCGACGCGAGCTCAAAGATGAAAACGTGATACATTAATTTTCGCTGATATAAATTAACGATTCGGCTCATGTCTGATGTAGTAGAACTGTAGTCATACGTACTCTCCAGTCAAGACAAAAGCAATACTCGAATATAGAATAATTTTTCATATGTAATGTCCATGAGTATATGTACAAATATTTGAACACCTTTATGTATGAAAACTTCGATAATTGACCATATTCGATGACAAGATTACACGTTGCGAGTGAAGTTTATTAACTCAATAAATGCTCAAAACTCATAAATATCAAATATGTAATAAAAGAGAGAAGGAAAAAATTATTGATTCGATATCTAGAAGAAAAGAAATAATCTTCTTTTTAGATTGATTTAAACGAAAAATTATGTATATACGTAAAATGATCCTTAATGTGGGAAAAAATTTTATGTATTTGAGAAATATACATTTTGAGTAAAGGAGAAATTAAATGTATATATACAATTCAATTCCAATGTAATAG]
[+] EMBL BI508660 [CGCTTCGACGCGAGCTCAAAGATGAAAACGTGATACATTAATTTTCGCTGATATAAATTAACGATTCGGCTCATGTCTGATGTAGTAGAACTGTAGTCATACGTACTCTCCAGTCAAGACAAAAGCAATACTCGAATATAGAATAATTTTTCATATGTAATGTCCATGAGTATATGTACAAATATTTGAACACCTTTATGTATGAAAACTTCGATAATTGACCATATTCGATGACAAGATTACACGTTGCGAGTGAAGTTTATTAACTCAATAAATGCTCAAAACTCATAAATATCAAATATGTAATAAAAGAGAGAAGGAAAAAATTATTGATTCGATATCTAGAAGAAAAGAAATAATCTTCTTTTTAGATTGATTTAAACGAAAAATTATGTATATACGTAAAATGATCCTTAATGTGGGAAAAAATTTTATGTATTTGAGAAATATACATTTTGAGTAAAGGAGAAATTAAATGTATATATACAATTCAATTCCAATGTAATAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_556#0 TTTTAAATTAAAAAACGACTGGACCACTCGGACGATCGTCGAAGCGGTAGTAAACGGTGT 60
consensus_556#1 ------------------------------------------------------------
consensus_556#0 TGTTCCTGGCGCTTCGACGCGAGCTCAAAGATGAAAACGTGATACATTAATTTTCGCTGA 120
consensus_556#1 ---------CGCTTCGACGCGAGCTCAAAGATGAAAACGTGATACATTAATTTTCGCTGA 51
***************************************************
consensus_556#0 TATAAATTAACGATTCGGCTCATGTCTGATGTAGTAGAACTGTAGTCATACGTACTCTCC 180
consensus_556#1 TATAAATTAACGATTCGGCTCATGTCTGATGTAGTAGAACTGTAGTCATACGTACTCTCC 111
************************************************************
consensus_556#0 AGTCAAGACAAAAGCAATACTCGAATATAGAATAATTTTTCATATGTAATGTCCATGAGT 240
consensus_556#1 AGTCAAGACAAAAGCAATACTCGAATATAGAATAATTTTTCATATGTAATGTCCATGAGT 171
************************************************************
consensus_556#0 ATATGTACAAATATTTGAACACCTTTATGTATGAAAACTTCGATAATTGACCATATTCGA 300
consensus_556#1 ATATGTACAAATATTTGAACACCTTTATGTATGAAAACTTCGATAATTGACCATATTCGA 231
************************************************************
consensus_556#0 TGACAAGATTACACGTTGCGAGTGAAGTTTATTAACTCAATAAATGCTCAAAACTCATAA 360
consensus_556#1 TGACAAGATTACACGTTGCGAGTGAAGTTTATTAACTCAATAAATGCTCAAAACTCATAA 291
************************************************************
consensus_556#0 ATATCAAATATGTAA---AAGAGAGAAGGAAAAAATTAAAATTGATTCCATATCTAGAAA 417
consensus_556#1 ATATCAAATATGTAATAAAAGAGAGAAGGAAAAAATT---ATTGATTCGATATCTAGAAG 348
*************** ******************* ******** **********
consensus_556#0 AGAAATAAAGAATAATTTTCTTTTTAGATTGATTTAACGAAAAAATTATGTATATACGTA 477
consensus_556#1 AAAA----GAAATAATCTTCTTTTTAGATTGATTTAAACGAAAAATTATGTATATACGTA 404
* ** ****** ******************** ********************
consensus_556#0 AAATGATCCTTAATATGAGAAAAAATGTATTGAAAAATTATGTATT-GAAAAATATACAT 536
consensus_556#1 AAATGATCCTTAATGTGGGAAAAAATTT----------TATGTATTTGAGAAATATACAT 454
************** ** ******** * ******** ** **********
consensus_556#0 TTTGAGTAAAGGAGAAATTAAATGTATATATACAATTCAATTCCAATGGAATGGAACGAA 596
consensus_556#1 TTTGAGTAAAGGAGAAATTAAATGTATATATACAATTCAATTCCAATGTAATAG------ 508
************************************************ *** *
consensus_556#0 ATGCTCAATGGCAATTAAAAAAGGATATGAGAGATTTGAGCATCTTGTTGAGTGTCATTG 656
consensus_556#1 ------------------------------------------------------------
consensus_556#0 TCACAAAATTATCTACTTAAGCAATAACGCATTACCCCATGTAATAATCATTTAAAAAAA 716
consensus_556#1 ------------------------------------------------------------
consensus_556#0 AAATGATTCCAGGTTCCCATGAAACTCGTTCTATGCATGGAATAACCTGATAATAAAAGG 776
consensus_556#1 ------------------------------------------------------------
consensus_556#0 CCAACTATATAAAATGCGCGCGATCAATCGATCAGGATTGCTCAAGAAACTAGAAACGAG 836
consensus_556#1 ------------------------------------------------------------
consensus_556#0 TCAATAACGAGTCAATAAAATTCGTAAGTCTCGTTAAGTTTAA 879
consensus_556#1 -------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |