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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_58#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1938 fasta sequence
[GAACGTATAAGTTTGAGAATTTCAGTGTCTGCTCTATTCGTTGACTTACTTCTCATTAAATTTGATTTTAATTTCAAGAATTTTAAAAAGCCTGCCAAAATGGTATGGGTTACCGTCTATGATAAGATGGTTTCCGGAAAAACGATCTCTCATGCATTATATGCTCAAACCCAACTAGATCATGTGTGTGCTCTGGATATCGATGCTCCTATAGGAGCTGTCCGTCTTTCAGGGATTATTTGTACAATTGGACCAGCTTCAAGATCTATTGATATGCTTGAAAAAATGATCGATACGGGTATGAACATTGCTAGATTAAATTTCTCGCACGGAACTCATGAATATCATGCTGAGACTATTGCTAATGTGCGACAAGCACAGAAAAACGTTTCCTCTAAAGCTGGATTAAGCATTCCTGTAGGAATTGCTCTTGATACTAAAGGTCCTGAAATCCGTACTGGACTTTTAGAAGGTGGTGGAGCTGCTGAAGTCGAATTAAAAAAAGATCAACTTTTTAAATTGTCTACTGATAAAGCATATGCAGAAAAAGGCACTTCAAGTATTGTTTATGTTGATTATGAGAATATTACTAAAGTTTTGAAGCCTAATAGTCGCGTTTTTGTCGATGATGGTTTAATTTCCCTTAAAGTTACTGCCATCCATCCTGAATTAGTTGTAACTGTTGTTGAAAATGGTGGGATGTTGGGTTCTCGTAAAGGTGTCAATCTACCAGGTACTCCTGTAGATTTACCTGCTGTTTCTGAAAAAGATAAGTCTGATTTAATATTCGGTGTTGAACATGAAGTTGATATGATTTTTGCCTCGTTTATACGAGATGCACACGCTTTGACAGAAATTCGAACAATTCTTGGTGAAAAAGGAAAAAATATTAAAGTAATATCTAAAATTGAAAATCATCAGGGCGTAGTAAATATTGATGAAATTATTGATGCTTCTGATGGTATTATGGTAGCACGTGGTGATCTTGGTATTGAAATACCACCAGAGAAAGTATTCTTAGCTCAAAAATCTGCTATTAGCAAATGTAATAAAGTTGGAAAACCAATAATTTGTGCTACACAAATGCTTGAATCTATGGTGAAAAAACCACGTGCAACCAGAGCTGAATCATCTGATGTAGCTAATGCTATTCTTGATGGAGCAGATTGTGTTATGTTATCAGGAGAAACTGCTAAAGGAGATTATCCATTGGAATGTGTACTCACAATGGCTAATATTTGTAAAGAAGCAGAGTCTGCAATCTGGCAAACACAATTATTTCACGAGCTTTCAATGAAAGCAATACCTCCAATTGATGCTACACATGCCGTAGCGATTGCTGTTGTAGAAGCATCTGTGAAATGTTTAGCTAGTGCTATTATAGTAATTACAACTACCGGCCATTCCGCGTATTTAATTTCTAAATACAGACCACGTTGCCCAATTATTACAGTTACTAGACACTCCCAGACTGCACGACAATCACATCTTTATCGTGGGATTTTGCCACTTCACTTTGAAGAACCACGATTAGCTGATTGGGTAAAAGATGTTGATGTACGTGTTCAGTTTGGTATGAAATTTGGCAAAAATCAAGGTTTCATTAAACCTGGAGATGCAGTTATAGTAGTCACTGGATGGAGAAAAGGCGCCGGATTTACGAACTCACTTCGTATTGTGACGGTCGAATAAATATACACTGGATTATAAAGGATTCAAAATATTTGATAAATTTAGATTTTGAAAATTCAATATATAATTAATATTGTATAACAGTGTATGATATACATAGTAAAATCATTGAAAGCGTAACAATTTAAAAATATATCAGTAGCTACAGTATTATCGTCATTATAATAACAAGTACCTCGATAAATACAGCATACCAAAATATACATATGTATGTACATACATATGTATAAATGTATATTCATACAT]
[+] EMBL BI510983 [GAACGTATAAGTTTGAGAATTTCAGTGTCTGCTCTATTCGTTGACTTACTTCTCATTAAATTTGATTTTAATTTCAAGAATTTTAAAAAGCCTGCCAAAATGGTATGGGTTACCGTCTATGATAAGATGGTTTCCGGAAAAACGATCTCTCATGCATTATATGCTCAAACCCAACTAGATCATGTGTGTGCTCTGGATATCGATGCTCCTATAGGAGCTGTCCGTCTTTCAGGGATTATTTGTACAATTGGACCAGCTTCAAGATCTATTGATATGCTTGAAAAAATGATCGATACGGGTATGAACATTGCTAGATTAAATTTCTCGCACGGAACTCATGAATATCATGCTGAGACTATTGCTAATGTGCGACAAGCACAGAAAAACGTTTCCTCTAAAGCTG ]
[-] EMBL BI512755 [ CTTGAAAAAATGATCGATACGGGTATGAACATTGCTAGATTAAATTTCTCGCACGGAACTCATGAATATCATGCTGAGACTATTGCTAATGTGCGACAAGCACAGAAAAACGTTTCCTCTAAAGCTGGATTAAGCATTCCTGTAGGAATTGCTCTTGATACTAAAGGTCCTGAAATCCGTACTGGACTTTTAGAAGGTGGTGGAGCTGCTGAAGTCGAATTAAAAAAAGATCAACTTTTTAAATTGTCTACTGATAAAGCATATGCAGAAAAAGGCACTTCAAGTATTGTTTATGTTGATTATGAGAATATTACTAAAGTTTTGAAGCCTAATAGTCGCGTTTTTGTCGATGATGGTTTAATTTCCCTTAAAGTTACTGCCATCCATCCTGAATTAGTTGTAACTGTTGTTGAAAATGGTGGGATGTTGGGTTCTCGTAAAGGTGTCAATCTACCAGGTACTCCTGTAGATTTACCTGCTGTTTCTGAAAAAGATAAGTCTGATTTAATATTCGGTGTTGAACATGAAGTTG ]
[+] EMBL BI512742 [ TAGTCGCGTTTTTGTCGATGATGGTTTAATTTCCCTTAAAGTTACTGCCATCCATCCTGAATTAGTTGTAACTGTTGTTGAAAATGGTGGGATGTTGGGTTCTCGTAAAGGTGTCAATCTACCAGGTACTCCTGTAGATTTACCTGCTGTTTCTGAAAAAGATAAGTCTGATTTAATATTCGGTGTTGAACATGAAGTTGATATGATTTTTGCCTCGTTTATACGAGATGCACACGCTTTGACAGAAATTCGAACAATTCTTGGTGAAAAAGGAAAAAATATTAAAGTAATATCTAAAATTGAAAATCATCAGGGCGTAGTAAATATTGATGAAATTATTGATGCTTCTGATGGTATTATGGTAGCACGTGGTGATCTTGGTATTGAAATACCACCAGAGAAAGTATTCTTAGCTCAAAAATCTGCTATTAGCAAATGTAATAAAGTTGGAAAACCAATAATTTGTGCTACACAAATGCTTGAATCTATGG ]
[+] EMBL BI511539 [ CTGTAGATTTACCTGCTGTTTCTGAAAAAGATAAGTCTGATTTAATATTCGGTGTTGAACATGAAGTTGATATGATTTTTGCCTCGTTTATACGAGATGCACACGCTTTGACAGAAATTCGAACAATTCTTGGTGAAAAAGGAAAAAATATTAAAGTAATATCTAAAATTGAAAATCATCAGGGCGTAGTAAATATTGATGAAATTATTGATGCTTCTGATGGTATTATGGTAGCACGTGGTGATCTTGGTATTGAAATACCACCAGAGAAAGTATTCTTAGCTCAAAAATCTGCTATTAGCAAATGTAATAAAGTTGGAAAACCAATAATTTGTGCTACACAAATGCTTGAATCTATGGTGAAAAAACCACGTGCAACCAGAGCTGAATCATCTGATGTAGCTAATGCTATTCTTGATGGAGCAGATTGTGTTATGTTATCAGGAGAAACTGCTAAAGGAGATTATCCATTGGAATGTGTACTCACAATGG ]
[+] EMBL BI511269 [ TAATAAAGTTGGAAAACCAATAATTTGTGCTACACAAATGCTTGAATCTATGGTGAAAAAACCACGTGCAACCAGAGCTGAATCATCTGATGTAGCTAATGCTATTCTTGATGGAGCAGATTGTGTTATGTTATCAGGAGAAACTGCTAAAGGAGATTATCCATTGGAATGTGTACTCACAATGGCTAATATTTGTAAAGAAGCAGAGTCTGCAATCTGGCAATCACAATTATTTCACGAGCTTTCAATGAAAGCAATACCTCCAATTGATGCTACACATGCCGTAGCGATTGCTGTTGTAGAAGCATCTGTGAAATGTTTAGCTAGTGCTATTATAGTAATTACAACTACCGGCCATTCCGCGTATTTAATTTCTAAATACAGACCACGTTGCCCAATTATTACAGTTACTAGACACTCCCAGACTGCACGACAATCACATCTTTATCGTGGGATTT ]
[+] EMBL BI511154 [ AATGGCTAATATTTGTAAAGAAGCAGAGTCTGCAATCTGGCAAACACAATTATTTCACGAGCTTTCAATGAAAGCAATACCTCCAATTGATGCTACACATGCCGTAGCGATTGCTGTTGTAGAAGCATCTGTGAAATGTTTAGCTAGTGCTATTATAGTAATTACAACTACCGGCCATTCCGCGTATTTAATTTCTAAATACAGACCACGTTGCCCAATTATTACAGTTACTAGACACTCCCAGACTGCACGACAATCACATCTTTATCGTGGGATTTTGCCACTTCACTTTGAAGAACCACGATTAGCTGATTGGGTAAAAGATGTTGATGTACGTGTTCAGTTTGGTATGAAATTTGGCAAAAATCAANNTTTCATTAAACCTGGAGATGCAGTTATAGTAGTCACTGGATGGAGAAAAGGCGCCGGATTTACGAACTCACTTCGTATTGTGACGGTCGAATAAATATACACTGGATTATAAAGGA ]
[+] EMBL BI512260 [ GCATCTGTGAAATGTTTAGCTAGTGCTATTATAGTAATTACAACTACCGGCCATTCCGCGTATTTAATTTCTAAATACAGACCACGTTGCCCAATTATTACAGTTACTAGACACTCCCAGACTGCACGACAATCACATCTTTATCGTGGGATTTTGCCACTTCACTTTGAAGAACCACGATTAGCTGATTGGGTAAAAGATGTTGATGTACGTGTTCAGTTTGGTATGAAATTTGGCAAAAATCAAGGTTTCATTAAACCTGGAGATGCAGTTATAGTAGTCACTGGATGGAGAAAAGGCGCCGGATTTACGAACTCACTTCGTATTGTGACGGTCGAATAAATATACACTGGATTATAAAGGATTCAAAATATTTGATAAATTTAGATTTTGAAAATTCAATATATAATTAATATTGTATAACAGTGTATGATATACATAGTAAAATCATTGAAAGCGTAACAAT ]
[+] EMBL BI510186 [ GCATCTGTGAAATGTTTAGCTAGTGCTATTATAGTAATTACAACTACCGGCCATTCCGCGTATTTAATTTCTAAATACAGACCACGTTGCCCAATTATTACAGTTACTAGACACTCCCAGACTGCACGACAATCACATCTTTATCGTGGGATTTTGCCACTTCACTTTGAAGAACCACGATTAGCTGATTGGGTAAAAGATGTTGATGTACGTGTTCAGTTTGGTATGAAATTTGGCAAAAATCAAGGTTTCATTAAACCTGGAGATGCAGTTATAGTAGTCACTGGATGGAGAAAAGGCGCCGGATTTACGAACTCACTTCGTATTGTGACGGTCGAATAAATATACACTGGATTATAAAGGATTCAAAATATTTGATAAATTTAGATTTTGAAAATTCAATATATAATTAATATTGTATAACAGTGTATGATATACATAGTAAAATCATTGAAAGCGTAACAATTTAAAAATATATCAGTAGCTACAGTATTATCGTCATTATAATAACAAGTACCTCGATAAATACAGCATACCAAAATATACATATGTATGTACATACATATGTATAAATGTATATTCATACAT]
consensusID : consensus_58#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 523 fasta sequence
[AATTTACTTATAATCGTTCGATAATTTTTCAGATTCATCTCCGCAAAAAGACGGCAATTAAAAACTGGATATTATTAGTAAACGCTTGTAAAACGGCAGTTCCGGAAGTAGTGACATTAAAGATTGCGGTCGCTTCCGTGCCGCTTATGCGAAACATATTGCTCTATCTAATGCGTGACCTTTGTCATAAAGCGGAATATTGGAAAGTTTGCGCTTAGTGATTGTTATGCAATACTGTAGAACCGATGAAGAAAGAATGAAATTCAACGAAATAGAAATATAACCTTCTTCAGGTTCCGTCCTGTAATCTAATTTATCAAGGTCAATGTTGGTTAACAATATTCGAATTGTGACAATTCGAAAAAAAAAAATGTGTGTGATTTTCTAACGAGACAATTTTTTTTTCTTTTTTTTTTAAATAAATTAAATTTCAAACGATAAAATAATTTCCTCAAAATATTCCTCGTTTATACGAGATGCACACGCTTTGACAGAAATTCGAACAATTCTTGGTGAAAAAAAA]
[+] EMBL BI507619 [AATTTACTTATAATCGTTCGATAATTTTTCAGATTCATCTCCGCAAAAAGACGGCAATTAAAAACTGGATATTATTAGTAAACGCTTGTAAAACGGCAGTTCCGGAAGTAGTGACATTAAAGATTGCGGTCGCTTCCGTGCCGCTTATGCGAAACATATTGCTCTATCTAATGCGTGACCTTTGTCATAAAGCGGAATATTGGAAAGTTTGCGCTTAGTGATTGTTATGCAATACTGTAGAACCGATGAAGAAAGAATGAAATTCAACGAAATAGAAATATAACCTTCTTCAGGTTCCGTCCTGTAATCTAATTTATCAAGGTCAATGTTGGTTAACAATATTCGAATTGTGACAATTCGAAAAAAAAAAATGTGTGTGATTTTCTAACGAGACAATTTTTTTTTCTTTTTTTTTTAAATAAATTAAATTTCAAACGATAAAATAATTTCCTCAAAATATTCCTCGTTTATACGAGATGCACACGCTTTGACAGAAATTCGAACAATTCTTGGTGAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_58#0 GAACGTATAAGTTTGAGAATTTCAGTGTCTGCTCTATTCGTTGACTTACTTCTCATTAAA 60
consensus_58#1 ------------------------------------------------------------
consensus_58#0 TTTGATTTTAATTTCAAGAATTTTAAAAAGCCTGCCAAAATGGTATGGGTTACCGTCTAT 120
consensus_58#1 ------------------------------------------------------------
consensus_58#0 GATAAGATGGTTTCCGGAAAAACGATCTCTCATGCATTATATGCTCAAACCCAACTAGAT 180
consensus_58#1 ------------------------------------------------------------
consensus_58#0 CATGTGTGTGCTCTGGATATCGATGCTCCTATAGGAGCTGTCCGTCTTTCAGGGATTATT 240
consensus_58#1 ------------------------------------------------------------
consensus_58#0 TGTACAATTGGACCAGCTTCAAGATCTATTGATATGCTTGAAAAAATGATCGATACGGGT 300
consensus_58#1 ------------------------------------------------------------
consensus_58#0 ATGAACATTGCTAGATTAAATTTCTCGCACGGAACTCATGAATATCATGCTGAGACTATT 360
consensus_58#1 --------------------------------AATTTACTTATAATCGTTCGATAATTTT 28
** * * *** ** * * **
consensus_58#0 GCTAATGTGCGACAAGCACAGAAAAACGTTTCCTCTAAAGCTGGATTAAGCATTCCTGTA 420
consensus_58#1 TCAGATTCATCTC---CGCAAAAAGACGGCAA-TTAAAAACTGGAT--ATTATT-----A 77
* ** * * ** *** *** * *** ****** * *** *
consensus_58#0 GGAATTGCTCTTGATACTAAAGGTCCTGAAATCCGTACTGGACTTTTAGAAGGTGGTGGA 480
consensus_58#1 GTAAACGCTTGTAAAACGGCAGTTCCGGAA----GTAGTGACATTAAAGATTGCGGTCGC 133
* ** *** * * ** ** *** *** *** ** ** *** * *** *
consensus_58#0 GCTGCTGAAGTCGAATTAAAAAAAGATCAACTTTTTAAATTGTCTACTGATAAAGCATAT 540
consensus_58#1 TTCCGTGCCGCTTATGCGAAACATATTGCTCTATCTAATGCGTGACCTTTGTCATAAAGC 193
** * * *** * * ** * *** ** ** * *
consensus_58#0 GCAGAAAAAGGCACTTCAAGTATTGTTTATGTTGATTATGAGAATATTACTAAAGTTTTG 600
consensus_58#1 GGAATATTGGAAAGTTTGCGC----TTAGTGATTGTTATGC-AATACTGTAGAACCGATG 248
* * * * * ** * ** ** * ***** **** * ** **
consensus_58#0 AAGCCTAATAGTCGCGTTTTTGTCGATGATGGTTTAATTTCCCTTAAAGTTACTGCCATC 660
consensus_58#1 AAG--AAAGAATGAAATTCAACGAAATAGAAATATAACCTTCTTCAGGTT--CCGTCCTG 304
*** ** * * ** ** * *** * * * * * * * * *
consensus_58#0 CATCCTGAATTAGTT--GTAACTGTTG-TTGAAAATGGTGGGATGTTGGGTTCTCGTAAA 717
consensus_58#1 TAATCTAATTTATCAAGGTCAATGTTGGTTAACAATATTCGAATTGTGACAATTCG-AAA 363
* ** * *** ** * ***** ** * *** * * ** ** *** ***
consensus_58#0 GGTGTCAATCTACCAGGTACTCCTGTAGATTTACCTGCTGTTTCTGAAAAAGATAAGTCT 777
consensus_58#1 AAAAAAAATGTGTGTGAT-TTTCTAACGAGACAATTTTTTTTTCTTTTTTTTTTAAATA- 421
*** * * * * ** ** * * * ***** *** *
consensus_58#0 GATTTAATATTCGGTGTTGAACATGAAGTTGATATGATTTTTGCCTCGTTTATACGAGAT 837
consensus_58#1 AATTAAATTTCAAACGATAAA-ATAATTTCCTCAAAATATT--CCTCGTTTATACGAGAT 478
*** *** * * * ** ** * * * ** ** *****************
consensus_58#0 GCACACGCTTTGACAGAAATTCGAACAATTCTTGGTGAAAAAGGAAAAAATATTAAAGTA 897
consensus_58#1 GCACACGCTTTGACAGAAATTCGAACAATTCTTGGTGAAAAAAAA--------------- 523
****************************************** *
consensus_58#0 ATATCTAAAATTGAAAATCATCAGGGCGTAGTAAATATTGATGAAATTATTGATGCTTCT 957
consensus_58#1 ------------------------------------------------------------
consensus_58#0 GATGGTATTATGGTAGCACGTGGTGATCTTGGTATTGAAATACCACCAGAGAAAGTATTC 1017
consensus_58#1 ------------------------------------------------------------
consensus_58#0 TTAGCTCAAAAATCTGCTATTAGCAAATGTAATAAAGTTGGAAAACCAATAATTTGTGCT 1077
consensus_58#1 ------------------------------------------------------------
consensus_58#0 ACACAAATGCTTGAATCTATGGTGAAAAAACCACGTGCAACCAGAGCTGAATCATCTGAT 1137
consensus_58#1 ------------------------------------------------------------
consensus_58#0 GTAGCTAATGCTATTCTTGATGGAGCAGATTGTGTTATGTTATCAGGAGAAACTGCTAAA 1197
consensus_58#1 ------------------------------------------------------------
consensus_58#0 GGAGATTATCCATTGGAATGTGTACTCACAATGGCTAATATTTGTAAAGAAGCAGAGTCT 1257
consensus_58#1 ------------------------------------------------------------
consensus_58#0 GCAATCTGGCAAACACAATTATTTCACGAGCTTTCAATGAAAGCAATACCTCCAATTGAT 1317
consensus_58#1 ------------------------------------------------------------
consensus_58#0 GCTACACATGCCGTAGCGATTGCTGTTGTAGAAGCATCTGTGAAATGTTTAGCTAGTGCT 1377
consensus_58#1 ------------------------------------------------------------
consensus_58#0 ATTATAGTAATTACAACTACCGGCCATTCCGCGTATTTAATTTCTAAATACAGACCACGT 1437
consensus_58#1 ------------------------------------------------------------
consensus_58#0 TGCCCAATTATTACAGTTACTAGACACTCCCAGACTGCACGACAATCACATCTTTATCGT 1497
consensus_58#1 ------------------------------------------------------------
consensus_58#0 GGGATTTTGCCACTTCACTTTGAAGAACCACGATTAGCTGATTGGGTAAAAGATGTTGAT 1557
consensus_58#1 ------------------------------------------------------------
consensus_58#0 GTACGTGTTCAGTTTGGTATGAAATTTGGCAAAAATCAAGGTTTCATTAAACCTGGAGAT 1617
consensus_58#1 ------------------------------------------------------------
consensus_58#0 GCAGTTATAGTAGTCACTGGATGGAGAAAAGGCGCCGGATTTACGAACTCACTTCGTATT 1677
consensus_58#1 ------------------------------------------------------------
consensus_58#0 GTGACGGTCGAATAAATATACACTGGATTATAAAGGATTCAAAATATTTGATAAATTTAG 1737
consensus_58#1 ------------------------------------------------------------
consensus_58#0 ATTTTGAAAATTCAATATATAATTAATATTGTATAACAGTGTATGATATACATAGTAAAA 1797
consensus_58#1 ------------------------------------------------------------
consensus_58#0 TCATTGAAAGCGTAACAATTTAAAAATATATCAGTAGCTACAGTATTATCGTCATTATAA 1857
consensus_58#1 ------------------------------------------------------------
consensus_58#0 TAACAAGTACCTCGATAAATACAGCATACCAAAATATACATATGTATGTACATACATATG 1917
consensus_58#1 ------------------------------------------------------------
consensus_58#0 TATAAATGTATATTCATACAT 1938
consensus_58#1 ---------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |