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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_584#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 876 fasta sequence
[GTGACAATCGTGGTAACCGGGAATCAAAATGCTGCTGGCAGTCAAGAGACCAAGGAGGAGAACAGGGCGGAATGGAGCGGGAAGATGCAATTTTTCCTCAGTATTATTGGTTACAGCGTGGGGCTTGGGAATATATGGAGATTCCCTTACCTGTGCCAACAGAACGGAGGAGGTGCCTTTCTCATCCCCTTTTTCGTGATGCTAATCCTAGAGGGTGTACCCCTCTTTTTAATCGAGCTGGGTCTCGGTCAACGCATGCGACAGGGCGCCCTTGGTGCATGGAAATGATTTCCGTCATCTTTGTTTATGGCCACGAAAAATTCACGAAAGATATAGAAGAGATGACAGGATACAGACCAGGGGCGTATTGGCAATTCACCTGGCGATTTCTCGCTCCTATAATCATGGTCTGCATCCTTGTCTCCAGTATAATCTCCATGGTTGTGAAAAAGCCTCAATATTCCGCGTGGGACGCGTCACGGGGCATAGCTGTACCGACCGCGTATCCCGGCTGGGTGTTGGCTATAGCGGTCGTCATCATTTTTGCGGGCATCGCGCCAATACCGATTGTATTCCTTTTGAGGCGGTTCCAATGCGTCAAGTTGGACGTTGACATTCACCAGGGCAGCATACGACGTATCGATACCACCGTTTCTACCAAAGAAATGATGGGAGATGTCGATTTGGACGAGTACCACGATCGCCTCGAAGATTTTCCCGAGGAGGACGAAGNCGTGAACAGCGATGACGACAACAACAGCGCCCCGCCGATAACGAAGNTCGTCCCTAACAAACTTCAGGGTAAACCGTTCAAAATGGAAGTGATGGACTTTTAAAAGTTGTCAGNTTCGTCGACTTTTGTCGTATCGTTTCACC]
[+] EMBL BI502916 [GTGACAATCGTGGTAACCGGGAATCAAAATGCTGCTGGCAGTCAAGAGACCAAGGAGGAGAACAGGGCGGAATGGAGCGGGAAGATGCAATTTTTCCTCAGTATTATTGGTTACAGCGTGGGGCTTGGGAATATATGGAGATTCCCTTACCTGTGCCAACAGAACGGAGGAGGTGCCTTTCTCATCCCCTTTTTCGTGATGCTAATCCTAGAGGGTGTACCCCTCTTTTTAATCGAGCTGGGTCTCGGTCAACGCATGCGACAGGGCGCCCTTGGTGCATGGAAATGATTTCCGTCATCTTTGTTTATGGCCACGAAAAATTCACGAAAGATATAGAAGAGATGACAGGATACAGACCAGGGGCGTATTGGCAATTCACCTGGCGATTTCTCGCTCCTATAATCATGGTCTGCATCCTTGTCTCCAGTATAATCTCCATGGTTGTGAAAAAGCCTCAATATTCCGCGTGGGACGCGTCACGGGGCATAGCTGTACCGACCGCGTAT ]
[+] EMBL BI516548 [ AATCATGGTCTGCATCCTTGTCTCCAGTATAATCTCCATGGTTGTGAAAAAGCCTCAATATTCCGCGTGGGACGCGTCACGGGGCATAGCTGTACCGACCGCGTATCCCGGCTGGGTGTTGGCTATAGCGGTCGTCATCATTTTTGCGGGCATCGCGCCAATACCGATTGTATTCCTTTTGAGGCGGTTCCAATGCGTCAAGTTGGACGTTGACATTCACCAGGGCAGCATACGACGTATCGATACCACCGTTTCTACCAAAGAAATGATGGGAGATGTCGATTTGGACGAGTACCACGATCGCCTCGAAGATTTTCCCGAGGAGGACGAAGACGTGAACAGCGATGACGACAACAACAGCGCCCCGCCGATAACGAAGNTCGTCCCTAACAAACTTCAGGGTAAACCGTTCAAAATGGAAGTGATGGACTTTTAAAAGTTGTCAGNTTCGTCGACTTTTGTCGTATCGTTTCACC]
[+] EMBL BI516369 [ AATCATGGTCTGCATCCTCGTCTCCAGTATAATCTCCATGGTTGTGAAAAAGCCTCAATATTCCGCGTGGGACGCGTCACGAGGCATAGCTGTACCGACCGCGTATCCCAGCTGGGTGTTGGCTATAGCGGTCGTCATCATTTTTGCGGGCATCGCGCCAATACCGATTGTATTCCTTTTGAGGCGGTTCCAATGCGTCAAGTTGGACGTTGACATTCACCAGGGCAGCATACGACGTATCGATACCACCGTTTCTACCAAAGAAATGATGGGAGATGTCGATTTGGACGAGTACCACGATCGCCTCGAAGATTTTCCCGAGGAGGACGAAGNCGTGAACAGCGATGACGACAACAACAG ]
consensusID : consensus_584#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 599 fasta sequence
[TATCGAGAAAAAAAACTCGTTCCGATCTGCGAATTCTTCCCCCTCCCCCCTCCCCAAATAACGAAGGAGAAAAATAAAGAAGGAGAGAAAGAGAGAGAGAGAAAAAGGGAAGAATCGAACTCGTCTTTTCGCCTTTGGAAACAAAGAGGTCCGAAGTGAAGCATGGTAGTCAAGAACGAGAATACGAGAAATGGGCATGAGCTGGCTCCGTTGAACGAGGAACGTCAGGCAGGGCAGAACGTGACAATCGTGGTAACCGGGAATCAAAATGCTGCTGGCAGTCAAGAGACCAAGGAGGAGAACAGGGCGGAATGGAGCGGGAAGATGCAATTTTTCCTCAGTATTATCGGTTACAGCGTGGGGCTTGGGAATATATGGAGATTCCCTTACCTGTGCCAACAGAACGGAGGAGGTGCCTTTCTCATCCCCTTTTTCGTGATGCTAATCCTAGAGGGTGTACCTCTCTTTTTAATCGAGCTGGGTCTCGGTCAACGCATGCGACAGGGCGCCCTTGGTGTATGGAACACGATACATCCATGGTTAGGCGGTATAGGGATAGCATCGTGCATCGTCACCTTCTTCGTAGCACTTTATTACAA]
[+] EMBL BI508914 [TATCGAGAAAAAAAACTCGTTCCGATCTGCGAATTCTTCCCCCTCCCCCCTCCCCAAATAACGAAGGAGAAAAATAAAGAAGGAGAGAAAGAGAGAGAGAGAAAAAGGGAAGAATCGAACTCGTCTTTTCGCCTTTGGAAACAAAGAGGTCCGAAGTGAAGCATGGTAGTCAAGAACGAGAATACGAGAAATGGGCATGAGCTGGCTCCGTTGAACGAGGAACGTCAGGCAGGGCAGAACGTGACAATCGTGGTAACCGGGAATCAAAATGCTGCTGGCAGTCAAGAGACCAAGGAGGAGAACAGGGCGGAATGGAGCGGGAAGATGCAATTTTTCCTCAGTATTATCGGTTACAGCGTGGGGCTTGGGAATATATGGAGATTCCCTTACCTGTGCCAACAGAACGGAGGAGGTGCCTTTCTCATCCCCTTTTTCGTGATGCTAATCCTAGAGGGTGTACCTCTCTTTTTAATCGAGCTGGGTCTCGGTCAACGCATGCGACAGGGCGCCCTTGGTGTATGGAACACGATACATCCATGGTTAGGCGGTATAGGGATAGCATCGTGCATCGTCACCTTCTTCGTAGCACTTTATTACAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_584#0 ------------------------------------------------------------
consensus_584#1 TATCGAGAAAAAAAACTCGTTCCGATCTGCGAATTCTTCCCCCTCCCCCCTCCCCAAATA 60
consensus_584#0 ------------------------------------------------------------
consensus_584#1 ACGAAGGAGAAAAATAAAGAAGGAGAGAAAGAGAGAGAGAGAAAAAGGGAAGAATCGAAC 120
consensus_584#0 ------------------------------------------------------------
consensus_584#1 TCGTCTTTTCGCCTTTGGAAACAAAGAGGTCCGAAGTGAAGCATGGTAGTCAAGAACGAG 180
consensus_584#0 ------------------------------------------------------------
consensus_584#1 AATACGAGAAATGGGCATGAGCTGGCTCCGTTGAACGAGGAACGTCAGGCAGGGCAGAAC 240
consensus_584#0 GTGACAATCGTGGTAACCGGGAATCAAAATGCTGCTGGCAGTCAAGAGACCAAGGAGGAG 60
consensus_584#1 GTGACAATCGTGGTAACCGGGAATCAAAATGCTGCTGGCAGTCAAGAGACCAAGGAGGAG 300
************************************************************
consensus_584#0 AACAGGGCGGAATGGAGCGGGAAGATGCAATTTTTCCTCAGTATTATTGGTTACAGCGTG 120
consensus_584#1 AACAGGGCGGAATGGAGCGGGAAGATGCAATTTTTCCTCAGTATTATCGGTTACAGCGTG 360
*********************************************** ************
consensus_584#0 GGGCTTGGGAATATATGGAGATTCCCTTACCTGTGCCAACAGAACGGAGGAGGTGCCTTT 180
consensus_584#1 GGGCTTGGGAATATATGGAGATTCCCTTACCTGTGCCAACAGAACGGAGGAGGTGCCTTT 420
************************************************************
consensus_584#0 CTCATCCCCTTTTTCGTGATGCTAATCCTAGAGGGTGTACCCCTCTTTTTAATCGAGCTG 240
consensus_584#1 CTCATCCCCTTTTTCGTGATGCTAATCCTAGAGGGTGTACCTCTCTTTTTAATCGAGCTG 480
***************************************** ******************
consensus_584#0 GGTCTCGGTCAACGCATGCGACAGGGCGCCCTTGGTGCATGGAA-ATGATTTCCGTCATC 299
consensus_584#1 GGTCTCGGTCAACGCATGCGACAGGGCGCCCTTGGTGTATGGAACACGATA-----CATC 535
************************************* ****** * *** ****
consensus_584#0 TTTGTTTATGGCCACGAAAAATTCACGAAAGATATAGAAGAGATGACAGGATACAGACCA 359
consensus_584#1 CATGGTTA-GGCGGTATAGGGATAGCATCGTGCATCG------TCACCTTCTTCGTAGCA 588
** *** *** * * * ** * * ** * * * **
consensus_584#0 GGGGCGTATTGGCAATTCACCTGGCGATTTCTCGCTCCTATAATCATGGTCTGCATCCTT 419
consensus_584#1 ----CTTTATTACAA--------------------------------------------- 599
* * * ***
consensus_584#0 GTCTCCAGTATAATCTCCATGGTTGTGAAAAAGCCTCAATATTCCGCGTGGGACGCGTCA 479
consensus_584#1 ------------------------------------------------------------
consensus_584#0 CGGGGCATAGCTGTACCGACCGCGTATCCCGGCTGGGTGTTGGCTATAGCGGTCGTCATC 539
consensus_584#1 ------------------------------------------------------------
consensus_584#0 ATTTTTGCGGGCATCGCGCCAATACCGATTGTATTCCTTTTGAGGCGGTTCCAATGCGTC 599
consensus_584#1 ------------------------------------------------------------
consensus_584#0 AAGTTGGACGTTGACATTCACCAGGGCAGCATACGACGTATCGATACCACCGTTTCTACC 659
consensus_584#1 ------------------------------------------------------------
consensus_584#0 AAAGAAATGATGGGAGATGTCGATTTGGACGAGTACCACGATCGCCTCGAAGATTTTCCC 719
consensus_584#1 ------------------------------------------------------------
consensus_584#0 GAGGAGGACGAAGNCGTGAACAGCGATGACGACAACAACAGCGCCCCGCCGATAACGAAG 779
consensus_584#1 ------------------------------------------------------------
consensus_584#0 NTCGTCCCTAACAAACTTCAGGGTAAACCGTTCAAAATGGAAGTGATGGACTTTTAAAAG 839
consensus_584#1 ------------------------------------------------------------
consensus_584#0 TTGTCAGNTTCGTCGACTTTTGTCGTATCGTTTCACC 876
consensus_584#1 -------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |