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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_612#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 718 fasta sequence
[AATCGAAGTTGTAAAAGGTGTTAAACTAATACAAGAATGTGTGCCAGAAAATTTACCATTAAAACTTAAACTTTATAATGAACTCGATAACTTAGTTGATGATAAAGTTATTTTATCTTCTTCAACATCTACTTTTCGTCCCTCTTTATTAAGCGAAAATTTAAAACATCGTGAACAAGTTATTGTATCACACCCGGTAAATCCTCCGTATTATGTACCACTTGTAGAAATTGTGCCAGCTCCTTGGACTCGTGCTGAAATACCATTGCAAGTGAAAGCTATTATGACTGAAATAGGTCAAACACCTGTTGTACTAACTAGAGAAATTGATGGTTTTGTGCTTAATCGAATACAATATGCAATTTTAAATGAAGCATGGAGATTAGTTGCTGACGGAATATTAAATGCGAAAGATGTAGACGCAGTTATGAGTGAAGGTCTTGGAATGCGATATGCATTTCTTGGTGCATTTGAAGCGGCGCATTTAAATGCAGAAGGAATGAAAAAATATTGTGAAACATATAAAAACTCAATTTATGATGTAAGTATGACATTTGGTCCAGTTCCTAAATNNNNGGGAGAAATGGCAGAAAAAATTAGCAATGAATTAAATGAGATGTGTCCATTAGAAAAATTAAAAGANAGACGTATATGGAGAGATGATGCTTTGACAAAATTATCTTTATTAAAAAAAAGAATTGAATAAGGAAAAAAAAAN]
[+] EMBL BI513665 [AATCGAAGTTGTAAAAGGTGTTAAACTAATACAAGAATGTGTGCCAGAAAATTTACCATTAAAACTTAAACTTTATAATGAACTCGATAACTTAGTTGATGATAAAGTTATTTTATCTTCTTCAACATCTACTTTTCGTCCCTCTTTATTAAGCGAAAATTTAAAACATCGTGAACAAGTTATTGTATCACACCCGGTAAATCCTCCGTATTATGTACCACTTGTAGAAATTGTGCCAGCTCCTTGGACTCGTGCTGAAATACCATTGCAAGTGAAAGCTATTATGACTGAAATAGGTCAAACACCTGTTGTACTAACTAGAGAAATTGATGGTTTTGTGCTTAATCGAATACAATATGCAATTTTAAATGAAGCATGGAGATTAGTTGCTGACGGAATATTAAATGCGAAAGATGTAGACGCAGTTATGAGTGAAGGTCTTGGAATG ]
[+] EMBL AF134818 [ TTGATGGTTTTGTGCTTAATCGAATACAATATGCAATTTTAAATGAAGCATGGAGATTAGTTGCTGACGGAATATTAAATGCGAAAGATGTAGACGCAGTTATGAGTGAAGGTCTTGGAATGCGATATGCATTTCTTGGTGCATTTGAAGCGGCGCATTTAAATGCAGAAGGAATGAAAAAATATTGTGAAACATATAAAAACTCAATTTATGATGTAAGTATGACATTTGGTCCAGTTCCTAAATTTGAGGGAGAAATGGCAGAAAAAATTAGCAATGAATTAAATGAGATGTGTCCATTAGAAAAATTAAAAGAAAGACGTATATGGAGAGATGATGCTTTGACAAAATTATCTTTATTAAAAAAAAGAATTGAATAAGGAAAAAAAAAN]
[+] EMBL BG101559 [ TTGATGGTTTTGTGCTTAATCGAATACAATATGCAATTTTAAATGAAGCATGGAGATTAGTTGCTGACGGAATATTAAATGCGAAAGATGTAGACGCAGTTATGAGTGAAGGTCTTGGAATGCGATATGCATTTCTTGGTGCATTTGAAGCGGCGCATTTAAATGCAGAAGGAATGAAAAAATATTGTGAAACATATAAAAACTCAATTTATGATGTAAGTATGACATTTGGTCCAGTTCCTAAATNNNNCGGAGAAATGGCCCAAAAAATTAGCAATGAATTAAATGAGATGTGTCCATTAGAAAAATTAAAAGANAGACGTATATGGAGAGATGATGCTTTGACAAAATTATCTTT ]
consensusID : consensus_612#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 377 fasta sequence
[NCNCGGAGNNCCAATCGANNACNAACAANGCAACCNCAANACGCTGCCACGGGAGANNATGTTGCNGACGGAANANTAAANGCCGAAAGATGTAGACGCCAGTTATGAGTGAAGGTCTTGGAATGCGATATGCATTTCTTGGTGCATTTGAAGCGGCGCATTTAAATGCAGAAGGAATGAAAAAATATTGTGAAACATATAAAAACTCAATTTATGATGTAAGTATGACATTTGGTCCAGTTCCTAAATTNNNCGGAGAAATGGCCCAAAAAATTAGCAATGAATTAAATGAGATGTGTCCATTAGAAAAATTAAAAGAAAGACGTATATGGAGAGATGATGCTTTGACAAAATTATCTTTATTAAAAAAAAGAATT]
[+] EMBL BG101600 [NCNCGGAGNNCCAATCGANNACNAACAANGCAACCNCAANACGCTGCCACGGGAGANNATGTTGCNGACGGAANANTAAANGCCGAAAGATGTAGACGCCAGTTATGAGTGAAGGTCTTGGAATGCGATATGCATTTCTTGGTGCATTTGAAGCGGCGCATTTAAATGCAGAAGGAATGAAAAAATATTGTGAAACATATAAAAACTCAATTTATGATGTAAGTATGACATTTGGTCCAGTTCCTAAATTNNNCGGAGAAATGGCCCAAAAAATTAGCAATGAATTAAATGAGATGTGTCCATTAGAAAAATTAAAAGAAAGACGTATATGGAGAGATGATGCTTTGACAAAATTATCTTTATTAAAAAAAAGAATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_612#0 AATCGAAGTTGTAAAAGGTGTTAAACTAATACAAGAATGTGTGCCAGAAAATTTACCATT 60
consensus_612#1 ------------------------------------------------------------
consensus_612#0 AAAACTTAAACTTTATAATGAACTCGATAACTTAGTTGATGATAAAGTTATTTTATCTTC 120
consensus_612#1 ------------------------------------------------------------
consensus_612#0 TTCAACATCTACTTTTCGTCCCTCTTTATTAAGCGAAAATTTAAAACATCGTGAACAAGT 180
consensus_612#1 ------------------------------------------------------------
consensus_612#0 TATTGTATCACACCCGGTAAATCCTCCGTATTATGTACCACTTGTAGAAATTGTGCCAGC 240
consensus_612#1 ------------------------------------------------------------
consensus_612#0 TCCTTGGACTCGTGCTGAAATACCATTGCAAGTGAAAGCTATTATGACTGAAATAGGTCA 300
consensus_612#1 ------------------------------------------------------------
consensus_612#0 AACACCTGTTGTACTAACTAGAGAAATTGATGGTTTTGTGCTTAATCGAATACAATATGC 360
consensus_612#1 ----------------NCNCGGAGNNCCAATCGANNACNAACAANGCAACCNCAANACGC 44
* * ** * * * * *** * **
consensus_612#0 AATTTTAAATGAAGCATGGAGATTAGTTGCTGACGGAATATTAAATGC-GAAAGATGTAG 419
consensus_612#1 ---------TGCCACGGGAGANNATGTTGCNGACGGAANANTAAANGCCGAAAGATGTAG 95
** * * ***** ******* * **** ** ***********
consensus_612#0 ACGC-AGTTATGAGTGAAGGTCTTGGAATGCGATATGCATTTCTTGGTGCATTTGAAGCG 478
consensus_612#1 ACGCCAGTTATGAGTGAAGGTCTTGGAATGCGATATGCATTTCTTGGTGCATTTGAAGCG 155
**** *******************************************************
consensus_612#0 GCGCATTTAAATGCAGAAGGAATGAAAAAATATTGTGAAACATATAAAAACTCAATTTAT 538
consensus_612#1 GCGCATTTAAATGCAGAAGGAATGAAAAAATATTGTGAAACATATAAAAACTCAATTTAT 215
************************************************************
consensus_612#0 GATGTAAGTATGACATTTGGTCCAGTTCCTAAATNNNNGGGAGAAATGGCAGAAAAAATT 598
consensus_612#1 GATGTAAGTATGACATTTGGTCCAGTTCCTAAATTNNNCGGAGAAATGGCCCAAAAAATT 275
********************************** *** *********** ********
consensus_612#0 AGCAATGAATTAAATGAGATGTGTCCATTAGAAAAATTAAAAGANAGACGTATATGGAGA 658
consensus_612#1 AGCAATGAATTAAATGAGATGTGTCCATTAGAAAAATTAAAAGAAAGACGTATATGGAGA 335
******************************************** ***************
consensus_612#0 GATGATGCTTTGACAAAATTATCTTTATTAAAAAAAAGAATTGAATAAGGAAAAAAAAAN 718
consensus_612#1 GATGATGCTTTGACAAAATTATCTTTATTAAAAAAAAGAATT------------------ 377
******************************************
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |