Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 65 cluster # 65       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_65#0 length = 1084 sequences # 8  

consensusID : consensus_65#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1084
fasta sequence
                              [ATGATGAACCGTTCCACACTAACAAAAATGTTCGATGTATTACTGCTTCTTAATATTTGATAACATTAAAAGTAATGAACATACATGTATATGGATTTTACAGGCAACATTATCATACTTTTTTTTTTTATTCAATTTCTTTAATAAACTTTCGTTAATGTTCTTATTCGTTTCTCATTACATTGAAGTACAATATTAATATGTAATATGAGTTTTTACGCTACATGATATAAAGTAGACCATGAAATAATTACAAATTAGTTCGAAAGGCCCCGAAGGGGTTAAGGACGGTTCGATCGATGATCTAAATTACGTGTACAGCCGCCATTTTTTCAGTTCATTGTCGTACCGTCGCATATCCCATCGAACCGGGGGTACTCGAGCATCTCTAATGATTTCATGGCATCTC-GTGCACCAAAGGCAACTACCACTGTTTCCTTTGCAGGAATCAAAGGACGCCGCTTTGACAGTGATGCACTAAAACTAGTAATATTGTGTTTTTATGCGATTTTGATAATTTAGAACGCGAACAAAAGTAAGAAAGCCATCATAAGGCAAAAAAGACCCATGGCTTCAGACAAGGCAAAGCCCAAAATGGCATATGAAAACAACTGTTGCTTAAGAGAAGGATTCCTGGCATAGCCTACGATTAAAGAACCAAACACTGAACCAATCCCAGCTCCCGATCCAGCAACACCTACAGTTGCAGCACCAGCACCAATGAATTTTGCAGCAGAGTCAATATCACGACTAATTGTAGATGTTTGGAAATTACGTATAATTGAAGATTGTCCCAATGGAGAACTGAATGGGTTCTGAATCTGATTCTGCTGTATAGACTGGCTGTGACTTACCACAGCACTGCTCAATGGTCGAATATAATTCTTAGTTCCAGAGACCAAGGTCGATTTGGCGACAGGTACAATAAATCTAGTACAAGCATACATGATGACGTTTGAAATGATCACTCAAATGAGTATCAGAATATGTTTAAAGAGGCGGTAAGAAGACCCCGGCCTGTTGGAATGTTGAATTGATGAATGACTACTGGNNCGAAACGCTCGACGTACGAAACCTCGGNCGC]

[+] EMBL BE844561             [ATGATGAACCGTTCCACACTAACAAAAATGTTCGATGTATTACTGCTTCTTAATATTTGATAACATTAAAAGTAATGAACATACATGTATATGGATTTTACAGGCAACATTATCATACTTTTTTTTTTTATTCAATTTCTTTAATAAACTTTCGTTAATGTTCTTATTCGTTTCTCATTACATTGAAGTACAATATTAATATGTAATATGAGTTTTTACGCTACATGATATAAAGTAGACCATGAAATAATTACAAATTAGTTCGAAAGGCCCCGAAGGGGTTAAGGACGGTTCGATCGATGATCTAAATTACGTGTACAGCCGCCATTTTTTCAGTTCATTGTCGTACCGTCGCATATCCCATCGAACCGGGGGTACTCGAGCATCTCTAATGATTTCATGGCATCTC GTGCACCAAAGGCAACTACCACTGTTTCCTTTGCAGGAATCAAAGGACGCCGCTTTGACAGTGATGCACTAAAACTAGTAATATTGTGTTTTTATGCGATTTTGATAATTTAGAACGCGAACAAAAGTAAGAAAGCCATCATAAGGCAAAAAAGACCCATGGCTTCAGACAAGGCAAAGCCCAAAATGGCATATGAAAACAACTGTTGCTTAAGAGAAGGATTCCTGGCATAGCCTACGATTAAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL BI506298             [                                                                                                     ttttttttTTATCATACTTTTTTTTTTTATTCAATTTCTTTAATAAACTTTCGTTAATGTTCTTATTCGTTTCTCATTACATTGAAGTACAATATTAATATGTAATATGAGTTTTTACGCTACATGATATAAAGTAGACCATGAAATAATTACAAATTAGTTCGAAAGGCCCCGAAGGGGTTAAGGACGGTTCGATCGATGATCTAAATTACGTGTACAGCCGCCATTTTTTCAGTTCATTGTCGTACCGTCGCATATCCCATCGAACCGGGGGTACTCGAGCATCTCTAATGATTTCATGGCATCTC GTGCACCAAAGGCAACTACCACTGTTTCCTTTGCAGGAATCAAAGGACGCCGCTTTGACAGTGATGCACTAAAACTAGTAATATTGTGTTTTTATGCGATTTTGATAATTTAGAACGCGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BI506082             [                                                                                                                                                                                                                                                                                                                                                                             GAACCGGGGGTACTCGAGCATCTCTAATGATTTCATGGCATCTC GTGCACCAAAGGCNACTACCACTGTTTCCTTTGCAGGAATCAAAGGACGCCGCTTTGACAGTGATGCACTAAAACTAGTAATATTGTGTTTTTATGCGATTTTGATAATTTAGAACGCGAACAAAAGTAAGAAAGCCATCATAAGGCAAAAAAGACCCATGGCTTCAGACAAGGCAAAGCCCAAAATGGCATATGAAAACAACTGTTGCTTAAGAGAAGGATTCCTGGCATAGCCTACGATTAAAGAACCAAACACTGAACCAATCCCAGCTCCCGATCCAGCAACACCTACAGTTGCAGCACCAGCACCAATGAATTTTGCAGCAGAGTCAATATCACGACTAATTGTAGATGTTTGGAAATTACGTATAATTGAAGATTGTCCCAATGGAGAACTGAATGGGTTCTGAATCTGATTCTGCTGTATAGACTGGCTGTGACTTACCACAGCACTGCTCAATGGTCGAATATAATTCTTAGTTCCAGAGACCAAGGTCGATTTGGCGACAGGTACAATAAATCTAGTACAAGCATACATGATGACGTTTGAAATGATCAC                                                                                                                    ]
[-] EMBL BG101683             [                                                                                                                                                                                                                                                                                                                                                                                                  CTCTAATGATTTCATGGCATCTCGGTGCACCAAAGGCAACTACCACTGTTTCCTTTGCAGGAATCAAAGGACGCCGCTTTGACAGTGATGCACTAAAACTAGTAATATTGTGTTTTTATGCGATTTTGATAATTTAGAACGCGAACAAAAGTAAGAAAGCCATCATAAGGCAAAAAAGACCCATGGCTTCAGACAAGGCAAAGCCCAAAATGGCATATGAAAACAACTGTTGCTTAAGAGAAGGATTCCTGGCATAGCCTACGATTAAAGAACCAAACACTGAACCAATCCCAGCTCCCGATCCAGCAACACCTACAG TGCAGCACCAGC                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BG101682             [                                                                                                                                                                                                                                                                                                                                                                                                         GATTTCATGGCATCTC GTGCACCAAAGGCAACTACCACTGTTTCCTTTGCAGGAATCAAAGGACGCCGCTTTGACAGTGATGCACTAAAACTAGTAATATTGTGTTTTTATGCGATTTTGATAATTTAGAACGCGAACAAAAGTAAGAAAGCCATCATAAGGCAAAAAAGACCCATGGCTTCAGACAGGGCAAAGCCCAAAATGGCATATGAAAACAACTGTTGCTTAAGAGAAGGATTCCTGGCATAGCCTACGATTAAAGAACCAAACACTGAACCAATCCCAGCTCCCGATCCAGCGACACCTACAGTTGCAGCACCAGCACCAATGAATTTTGCAGCAGAGTCAATATCACGACTAATTGTAGATGTTTGGAAATTACGTATAATTGAAGATTGTCCCAATGGAGAACTGAATGGGTTCTGAATCTGATTCTGCTGTATAGACTGGCTGTGACTTACCACAGCACTGCTCAATGGTCGAATATAATTCTTAGTTCCAGAGACCAAGGTTGATTTGGCGACAGGTACAATAAATCTAGTACAAGCATACATGATGACGTTTGAAATGATCACTCAAATGAGTATCAGAATATGTTTAAAGAGGCGGTAAGAAGACCCCGGCCTGTTGGAATGTTGAATTGATGAATGACTACTGGNNCGAAACGCTCGACGTACGAAACCTCGGNCGC]
[-] EMBL BI503427             [                                                                                                                                                                                                                                                                                                                                                                                                                              ACCAAAGGCAACTACCACTGTTTCCTTTGCAGGAATCAAAGGACGCCGCTTTGACAGTGATGCACTAAAACTAGTAATATTGTGTTTTTATGCGATTTTGATAATTTAGAACGCGAACAAAAGTAAGAAAGCCATCATAAGGCAAAAAAGACCCATGGCTTCAGACAAGGCAAAGCCCAAAATGGCATATGAAAACAACTGTTGCTTAAGAGAAGGATTCCTGGCATAGCCTACGATTAAAGAACCAAACACTGAACCAATCCCAGCTCCCGATCCAGCAACACCTACAGTTGCAGCACCAGCACCAATGAATTTTGCAGCAGAGTCAATATCACGACTAATTGTAGATGTTTGGAAATTACGTATAATTGAAGATTGTCCCAATGGAGAACTGAATGGGTTCTGAATCTGATTCTGCTGTATAGACTGGCTGTGACTTACCACAGCACTGCTCAATGGTCGAATATAATTCTTAGTTCCAGAGACCAAGGTCGATTTGGCGACAGGTACAATAAATCTAGTACAAGCATACATGATGACGTTT                                                                                                                               ]
[-] EMBL BI505434             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATTTTGATAATTTAGAACGCGAACAAAAGTAAGAAAGCCATCATAAGGCAAAAAAGACCCATGGCTTCAGACAAGGCAAAGCCCAAAATGGCATATGAAAACAACTGTTGCTTAAGAGAAGGATTCCTGGCATAGCCTACGATTAAAGAACCAAACACTGAACCAATCCCAGCTCCCGATCCAGCAACACCTACAGTTGCAGCACCAGCACCAATGAATTTTGCAGCAGAGTCAATATCACGACTAATTGTAGATGTTTGGAAA                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BI504764             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GATTCCTGGCATAGCCTACGATTAAAGAACCAAACACTGAACCAATCCCAGCTCCCGATCCAGCAACACCTACAGTTGCAGCACCAGCACCAATGAATTTTGCAGCAGAGTCAATATCACGACTAATTGTAGATGTTTGGAAATTACGTATAATTGAAGATTGTCCCAATGGAGAACTGAATGGGTTCTGAATCTGATTCTGCTGTATAGACTGGCTGTGACTTACCACAGCACTGCTCAATGGTCGAATATAATTCTTAGTTCCAGAGACCAAGGTCGATTTGGCGACAGGTACAATAAATCTAGTACAAGCATACATGATGACGTTTGAAATGATCACTCAAATGAGTATCAGAATATGTTTAA                                                                                          ]


>consensus_65#0 ATGATGAACCGTTCCACACTAACAAAAATGTTCGATGTATTACTGCTTCTTAATATTTGA TAACATTAAAAGTAATGAACATACATGTATATGGATTTTACAGGCAACATTATCATACTT TTTTTTTTTATTCAATTTCTTTAATAAACTTTCGTTAATGTTCTTATTCGTTTCTCATTA CATTGAAGTACAATATTAATATGTAATATGAGTTTTTACGCTACATGATATAAAGTAGAC CATGAAATAATTACAAATTAGTTCGAAAGGCCCCGAAGGGGTTAAGGACGGTTCGATCGA TGATCTAAATTACGTGTACAGCCGCCATTTTTTCAGTTCATTGTCGTACCGTCGCATATC CCATCGAACCGGGGGTACTCGAGCATCTCTAATGATTTCATGGCATCTCGTGCACCAAAG GCAACTACCACTGTTTCCTTTGCAGGAATCAAAGGACGCCGCTTTGACAGTGATGCACTA AAACTAGTAATATTGTGTTTTTATGCGATTTTGATAATTTAGAACGCGAACAAAAGTAAG AAAGCCATCATAAGGCAAAAAAGACCCATGGCTTCAGACAAGGCAAAGCCCAAAATGGCA TATGAAAACAACTGTTGCTTAAGAGAAGGATTCCTGGCATAGCCTACGATTAAAGAACCA AACACTGAACCAATCCCAGCTCCCGATCCAGCAACACCTACAGTTGCAGCACCAGCACCA ATGAATTTTGCAGCAGAGTCAATATCACGACTAATTGTAGATGTTTGGAAATTACGTATA ATTGAAGATTGTCCCAATGGAGAACTGAATGGGTTCTGAATCTGATTCTGCTGTATAGAC TGGCTGTGACTTACCACAGCACTGCTCAATGGTCGAATATAATTCTTAGTTCCAGAGACC AAGGTCGATTTGGCGACAGGTACAATAAATCTAGTACAAGCATACATGATGACGTTTGAA ATGATCACTCAAATGAGTATCAGAATATGTTTAAAGAGGCGGTAAGAAGACCCCGGCCTG TTGGAATGTTGAATTGATGAATGACTACTGGNNCGAAACGCTCGACGTACGAAACCTCGG NCGC



clustalw multiple alignements is not computed in this case


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)