These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_666#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 563 fasta sequence [TGTCGGCTCGGCCGATGAGTTTCGTTGATCGTCTCTCTCATTCTCTCGGCCGTCATCACTGTCGCCGCCTTTTTCTTGGCATCGCCTTCAGGAGAACCCGTGGCAATTCTCACGGATCTCGAAGTAGAGATTCAGCAGTGCCGATTCCGGCACGTCGTGGAAGCACCTACCCTCTGGCCATTGTACGCATACGTTGGGTACCGTCGGTGGTTTTTTCGTCTGCACCCTCGCTGTCGCATTGTTCACCTCAATCTTTCTGCCCTCAACCACGGTGCCGTGTAGCCTCTCACGTGCCCGGTCCGCGTCAGCACTATTTGCGAATGTTACAAAACCGAATCCCTTGCTTCCTCTTTCGTTAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAGGGTCTCGGAAGCGGAAAGGTATATTGCTGACGTGAAGGCGTTTCGGTTGACCTTTCAGGTCTGTACCCTGTGTTGCGGTGGCAGGTGTGGTTGCACCTGAAGTGACAGGTACCAGGGCGCTGCCCTCGACGGCGCCCTCGGGGTTGC] [+] EMBL BI506415 [TGTCGGCTCGGCCGATGAGTTTCGTTGATCGTCTCTCTCATTCTCTCGGCCGTCATCACTGTCGCCGCCTTTTTCTTGGCATCGCCTTCAGGAGAACCCGTGGCAATTCTCACGGATCTCGAAGTAGAGATTCAGCAGTGCCGATTCCGGCACGTCGTGGAAGCACCTACCCTCTGGCCATTGTACGCATACGTTGGGTACCGTCGGTGGTTTTTTCGTCTGCACCCTCGCTGTCGCATTGTTCACCTCAATCTTTCTGCCCTCAACCACGGTGCCGTGTAGCCTCTCACGTGCCCGGTCCGCGTCAGCACTATTTGCGAATGTTACAAAACTGAATCCCTTGCTTCCTCTTTCGTTAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAGGGTCTCGGAAGCGGAAAGGTATATTGCTGACGTGAAGGCGTTTCGGTTGACCTTTCAGGTCTGTACCCTGTGTTGCGGTGGCAGGTGTGGTTGCACCTGAAGTGACAGGTACCAGGGCGCTGCCCTCGACGGCGCCCTCGGGGTTGC] [+] EMBL BI514758 [TGTCGGCTCGGCCGATGAGTTTCGTTGATCGTCTCTCTCATTCTCTCGGCCGTCATCACTGTCGCCGCCTTTTTCTTGGCATCGCCTTCAGGAGAACCCGTGGCAATTCTCACGGATCTCGAAGTAGAGATTCAGCAGTGCCGATTCCGGCACGTCGTGGAAGCACCTACCCTCTGGCCATTGTACGCATACGTTGGGTACCGTCGGTGGTTTTTTCGTCTGCACCCTCGCTGTCGCATTGTTCACCTCAATCTTTCTGCCCTCAACCACGGTGCCGTGTAGCCTCTCACGTGCCCGGTCCGCGTCAGCACTATTTGCGAATGTTACAAAACCGAATCCCTTGCTTCCTCTTTCGTTAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAGG ] consensusID : consensus_666#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 413 fasta sequence [GGTATATAGGTATCTCGTTTTACTAGCCTTCCACACATATATATATATTTTTCTATTTCTCGCTCGTTCTCTACACCGTACTATCCGATCTCTACTACGTGTTTCCCGCACGCGCCTCGACTCTCGTCTGTCGCTGTGTCGCGCGTAGAACGACTCTCTTGCTTCCTCTTTCGTTAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAGGGTCTCGGAAGCGGAAAGGTATATTGCTGACGTGAAGGCGTTTCGGTTGACCTTTCAGGTCTGTACCCTGTGTTGCGGTGGCAGGTGTGGTTGCACCTGAAGTGACAGGTACCAGGGCGCTGCCCTCGACGGCGCCCTCGGGGTTGCTCTCGTTGCCGGCGGGTGTGGGGGCGGGTTGC] [+] EMBL BI508592 [GGTATATAGGTATCTCGTTTTACTAGCCTTCCACACATATATATATATTTTTCTATTTCTCGCTCGTTCTCTACACCGTACTATCCGATCTCTACTACGTGTTTCCCGCACGCGCCTCGACTCTCGTCTGTCGCTGTGTCGCGCGTAGAACGACTCTCTTGCTTCCTCTTTCGTTAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAGGGTCTCGGAAGCGGAAAGGTATATTGCTGACGTGAAGGCGTTTCGGTTGACCTTTCAGGTCTGTACCCTGTGTTGCGGTGGCAGGTGTGGTTGCACCTGAAGTGACAGGTACCAGGGCGCTGCCCTCGACGGCGCCCTCGGGGTTGCTCTCGTTGCCGGCGGGTGTGGGGGCGGGTTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_666#0 TGTCGGCTCGGCCGATGAGTTTCGTTGATCGTCTCTCTCATTCTCTCGGCCGTCATCACT 60 consensus_666#1 ------------------------------------------------------------ consensus_666#0 GTCGCCGCCTTTTTCTTGGCATCGCCTTCAGGAGAACCCGTGGCAATTCTCACGGATCTC 120 consensus_666#1 ------------------------------------------------------------ consensus_666#0 GAAGTAGAGATTCAGCAGTGCCGATTCCGGCACGTCGTGGAAGCACCTACCCT--CTGGC 178 consensus_666#1 ---------------------------------GGTATATAGGTATCTCGTTTTACTAGC 27 * * * * * ** * ** ** consensus_666#0 CATTGTACGCATACGTTGGGTACCGTCGGTGGTTTTTTCGTCTGCACCCTCGCTGTCGCA 238 consensus_666#1 C-TTCCACACATATAT---ATAT--------ATTTTTCTATTT-----CTCGCT----CG 66 * ** ** **** * ** ***** * * ****** * consensus_666#0 TTGTTCACCTCAATCTTTCTGCCCTCAACCACGGTGCCGTGTAGCCTCTCACGTGCC-CG 297 consensus_666#1 TTCTCTACACCGTACTATCCGATCTCTACTACG------TGTT-TCCCGCACGCGCCTCG 119 ** * ** * ** ** * *** ** *** *** * * **** *** ** consensus_666#0 GTCCGCGTCAG-CACTATTTGCGAATGTTACAAAACCGAATCCCTTGCTTCCTCTTTCGT 356 consensus_666#1 ACTCTCGTCTGTCGCTGTGT-CGCGCGT----AGAACGACTCTCTTGCTTCCTCTTTCGT 174 * **** * * ** * * ** ** * * *** ** ***************** consensus_666#0 TAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAG 416 consensus_666#1 TAAATATGATTTCCACGTCGAGGATCGGCCCGAATTGCCCAAACATTGCCCTGAGATCAG 234 ************************************************************ consensus_666#0 GGTCTCGGAAGCGGAAAGGTATATTGCTGACGTGAAGGCGTTTCGGTTGACCTTTCAGGT 476 consensus_666#1 GGTCTCGGAAGCGGAAAGGTATATTGCTGACGTGAAGGCGTTTCGGTTGACCTTTCAGGT 294 ************************************************************ consensus_666#0 CTGTACCCTGTGTTGCGGTGGCAGGTGTGGTTGCACCTGAAGTGACAGGTACCAGGGCGC 536 consensus_666#1 CTGTACCCTGTGTTGCGGTGGCAGGTGTGGTTGCACCTGAAGTGACAGGTACCAGGGCGC 354 ************************************************************ consensus_666#0 TGCCCTCGACGGCGCCCTCGGGGTTGC-------------------------------- 563 consensus_666#1 TGCCCTCGACGGCGCCCTCGGGGTTGCTCTCGTTGCCGGCGGGTGTGGGGGCGGGTTGC 413 *************************** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |