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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_691#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 869 fasta sequence
[TTTACATTATCATTAATGCAGTGTTTTCCTTGAAAGCTAGTTCCTTTAAAGAAATACTGAAAAATAAGGTACATGTTTTTTTGAGTATCTAATCAGATTTTTAAATGGTGTTGCATGATGCAAGGTTTGCACAATTAGAACACACACGTATTTATATCATAAATATAACAATAAAAAAATATTAGATTAAAATTAAAAATATTGTAAGTATTCGTATATATTCTCTGAACACGTTTGATAATGTTATACATGCTGGAACACAAGAAGCGGCAGGAGACATAGAGATAGATCAGCTGAGACGCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGAATTGTTGTTCAGATGGGCAACATATCACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTCAGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAGTCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACCTACTACTCCTATAATTCCAATTTCACCAAGTCATATTGAGAGGGAAAAAACACCACCAAAACCAATATATTTAGAAGGTGCACTTCCTCCACAATGTGAATTGCTTGTAACAGATTCAGAAACTCAAGCTCAGAAAGCGGAAGAAGATGTAGAGGCACCTGTTGTACTTTCAGGCAAAATGACTCTCTCTCTCATCAGTCTCGACCAAAATGCAGCTGAAATTGATGAAGAAGATCAAGAAAAAAATGCAAATGATATAAGAATCTTGAATTTAAAAGATACAGAAAAAGTGTTAAATATTAAAAAAAATAATAAAGAGGAAATTAAGAATAAAGATGAA]
[+] EMBL BI516172 [TTTACATTATCATTAATGCAGTGTTTTCCTTGAAAGCTAGTTCCTTTAAAGAAATACTGAAAAATAAGGTACATGTTTTTTTGAGTATCTAATCAGATTTTTAAATGGTGTTGCATGATGCAAGGTTTGCACAATTAGAACACACACGTATTTATATCATAAATATAACAATAAAAAAATATTAGATTAAAATTAAAAATATTGTAAGTATTCGTATATATTCTCTGAACACGTTTGATAATGTTATACATGCTGGAACACAAGAAGCGGCAGGAGACATAGAGATAGATCAGCTGAGACGCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGAATTGTTGTTCAGATGGGCAACATATCACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTCAGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAGTCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACC ]
[+] EMBL BI514622 [ GATGGGCAACATATCACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTCAGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAGTCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACCTACTACTCCTATAATTCCAATTTCACCAAGTCATATTGAGAGGGAAAAAACACCACCAAAACCAATATATTTAGAAGGTGCACTTCCTCCACAATGTGAATTGCTTGTAACAGATTCAGAAACTCAAGCTCAGAAAGCGGAAGAAGATGTAGAGGCACCTGTTGTACTTTCAGGCAAAATGACTCTCTCTCTCATCAGTCTCGACCAAAATGCAGCTGAAATTGATGAAGAAGATCAAGAAAAAAATGCAAATGATATAAGAATCTTGAATTTAAAAGATACAGAAAAAGTGTTAAATATTAAAAAAAATAATAAAGAGGAAATTAAGAATAAAGATGAA]
consensusID : consensus_691#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 492 fasta sequence
[TGTTGGAGGGGCGCGTTGCTTGATGCAAGGTTTGCACAATTAGAACACACACGTATTTATATCATAAATATAACAATAAAAAAATATTAGATTAAAATTAAAAATATTGTAAGTATTCGTATATATTCTCTGAACACGTTTGATAATGTTATACATGCTGGAACACAAGAAGCGGCAGGAGACATAGAGATAGATCAGCTGAGACGCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGAATTGTTGTTCAGATGGGCAACATATCACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTCAGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAGTCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACCTACTACTCCTATAATTCNAATTTCACCAAGTCATATTGAGNGGGAAAAAACACCACCA]
[+] EMBL BI513415 [TGTTGGAGGGGCGCGTTGCTTGATGCAAGGTTTGCACAATTAGAACACACACGTATTTATATCATAAATATAACAATAAAAAAATATTAGATTAAAATTAAAAATATTGTAAGTATTCGTATATATTCTCTGAACACGTTTGATAATGTTATACATGCTGGAACACAAGAAGCGGCAGGAGACATAGAGATAGATCAGCTGAGACGCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGAATTGTTGTTCAGATGGGCAACATATCACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTCAGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAGTCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACCTACTACTCCTATAATTCNAATTTCACCAAGTCATATTGAGNGGGAAAAAACACCACCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_691#0 TTTACATTATCATTAATGCAGTGTTTTCCTTGAAAGCTAGTTCCTTTAAAGAAATACTGA 60
consensus_691#1 ------------------------------------------------------------
consensus_691#0 AAAATAAGGTACATGTTTTTTTGAGTATCTAATCAGATTTTTAAATGGTGTTGCATGATG 120
consensus_691#1 -----------------------------------TGTTGGAGGGGCGCGTTGCTTGATG 25
** * ***** *****
consensus_691#0 CAAGGTTTGCACAATTAGAACACACACGTATTTATATCATAAATATAACAATAAAAAAAT 180
consensus_691#1 CAAGGTTTGCACAATTAGAACACACACGTATTTATATCATAAATATAACAATAAAAAAAT 85
************************************************************
consensus_691#0 ATTAGATTAAAATTAAAAATATTGTAAGTATTCGTATATATTCTCTGAACACGTTTGATA 240
consensus_691#1 ATTAGATTAAAATTAAAAATATTGTAAGTATTCGTATATATTCTCTGAACACGTTTGATA 145
************************************************************
consensus_691#0 ATGTTATACATGCTGGAACACAAGAAGCGGCAGGAGACATAGAGATAGATCAGCTGAGAC 300
consensus_691#1 ATGTTATACATGCTGGAACACAAGAAGCGGCAGGAGACATAGAGATAGATCAGCTGAGAC 205
************************************************************
consensus_691#0 GCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGAATTGTTGTTCAGATGGGCAACATAT 360
consensus_691#1 GCCGTTTGGTCGAGACAGAAGCAGCCATGGAAAGAATTGTTGTTCAGATGGGCAACATAT 265
************************************************************
consensus_691#0 CACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTC 420
consensus_691#1 CACGTTCAGTTATGCATAGTCCAAATCCACAACAAGAATTCAAGGACAATACCATTGCTC 325
************************************************************
consensus_691#0 AGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAG 480
consensus_691#1 AGGTTCAATATAGTACAGAAGATAAAGTAGAAAACATAGAACATTCACCAACTATTAAAG 385
************************************************************
consensus_691#0 TCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACCTACTACTCCTA 540
consensus_691#1 TCATGGGTATGGAAATGACAGCTAGTTGTGAGAATAAGGGTAGTAGACCTACTACTCCTA 445
************************************************************
consensus_691#0 TAATTCCAATTTCACCAAGTCATATTGAGAGGGAAAAAACACCACCAAAACCAATATATT 600
consensus_691#1 TAATTCNAATTTCACCAAGTCATATTGAGNGGGAAAAAACACCACCA------------- 492
****** ********************** *****************
consensus_691#0 TAGAAGGTGCACTTCCTCCACAATGTGAATTGCTTGTAACAGATTCAGAAACTCAAGCTC 660
consensus_691#1 ------------------------------------------------------------
consensus_691#0 AGAAAGCGGAAGAAGATGTAGAGGCACCTGTTGTACTTTCAGGCAAAATGACTCTCTCTC 720
consensus_691#1 ------------------------------------------------------------
consensus_691#0 TCATCAGTCTCGACCAAAATGCAGCTGAAATTGATGAAGAAGATCAAGAAAAAAATGCAA 780
consensus_691#1 ------------------------------------------------------------
consensus_691#0 ATGATATAAGAATCTTGAATTTAAAAGATACAGAAAAAGTGTTAAATATTAAAAAAAATA 840
consensus_691#1 ------------------------------------------------------------
consensus_691#0 ATAAAGAGGAAATTAAGAATAAAGATGAA 869
consensus_691#1 -----------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |