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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_696#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 516 fasta sequence
[TTGATGTACGTGGTAATTCAATGCGATTCTAAGAATAATAACGGGGAACTTCTGAAATATTTTGTCCGCGGCGTCGCCTTTTCCATCCAAATGTGGGAACATTTTTCTTAATCACGGCCGAAAAATACTGTGTGCAAATTTTTCTTTCGTTGAACTCTAATTTCCTCTAATTATATCTCCTGTTTTTCGATATTTCTTTTCTTCTTTTTTTTTTCNNTTC-TTTTTTTTTTCTTTCTTGCTCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTCGGAAACTCGGAAGAGAAAAAAAAAAAAAAGGAAAAAAAGAAGAAGAAAACCCATTTATTTCGGCGTGTACAAAGTACAAAGTTTCTAATTTTTTCTCTCTTTTTCTTTTATTTTCGCTTCTTCTCGAAAAAAGATATATTAACATTAACATGGTAAAATTCGAAAAATTGATTGCCACGCACGAAAGTTGCACAAGCCCGACAGACTGAAAAATATTCCT]
[+] EMBL BI515824 [TTGATGTACGTGGTAATTCAATGCGATTCTAAGAATAATAACGGGGAACTTCTGAAATATTTTGTCCGCGGCGTCGCCTTTTCCATCCAAATGTGGGAACATTTTTCTTAATCACGGCCGAAAAATACTGTGTGCAAATTTTTCTTTCGTTGAACTCTAATTTCCTCTAATTATATCTCCTG TTTCGATATTTCTTTTCTTCTTTTTTTTTTCNNTTCTTTTTTTTTTTCTTTCTTGCTCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTCGGAAACTCGGAAGAGAAAAA ]
[-] EMBL BI513299 [ TTGAACTCTAATTTCCTCTAATTATATCTCCTGTTTTTCGATATTTCTTTTCTTCTTTTTTTTTTCGTTTC TTTTTTTTTTCTTTCTTGCTCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTCGGAAACTCGGAAGAGAAAAAAAAAAAAAAGGAAAAAAAGAAGAAGAAAACCCATTTATTTCGGCGTGTACAAAGTACAAAGTTTCTAATTTTTTCTCTCTTTTTCTTTTATTTTCGCTTCTTCTCGAAAAAAGATATATTAACATTAACATGGTAAAATTCGAAAAATTGATTGCCACGCACGAAAGTTGCACAAGCCCGACAGACTGAAAAATATTCCT]
consensusID : consensus_696#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 215 fasta sequence
[CCACTGCACTTGGTTCTTCCTCATTATTCACGGAACACGTAACGATTTCCTCGGGTAAACATAATTGTAATTGATCGCTACTAGGATTGGTACTATCTCCTGTTTCGATATTTCTTTTCTTCTTTTTTTTTTCGTTTCTCTTTTTTTTTCTTTCTTGCTCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTC]
[-] EMBL BI508600 [CCACTGCACTTGGTTCTTCCTCATTATTCACGGAACACGTAACGATTTCCTCGGGTAAACATAATTGTAATTGATCGCTACTAGGATTGGTACTATCTCCTGTTTCGATATTTCTTTTCTTCTTTTTTTTTTCGTTTCTCTTTTTTTTTCTTTCTTGCTCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_696#0 TTGATGTACGTGGTAATTCAATGCGATTCTAAGAATAATAACGGGGAACTTCTGAAATAT 60
consensus_696#1 ------------------------------------------------------------
consensus_696#0 TTTGTCCGCGGCGTCGCCTTTTCCATCCAAATGTGGGAACATTTTTCTTAATCACGGCCG 120
consensus_696#1 -----------------CCACTGCACTTGGTTCTTCCTCATTATTCACGGAACACG--TA 41
* * ** * * * ** * ****
consensus_696#0 AAAAATACTGTGTGCAAATTTTTCTTTCGTTGAACTCTAATTTCCTCTAATTATATCTCC 180
consensus_696#1 ACGATTTCCTCGGGTAAACATAATTGTAATTGATCGCTA-CTAGGATTGGTACTATCTCC 100
* * * * * * *** * * * **** * *** * * * *******
consensus_696#0 TGTTTTTCGATATTTCTTTTCTTCTTTTTTTTTTCNNTTCT-TTTTTTTTTCTTTCTTGC 239
consensus_696#1 TGTTT--CGATATTTCTTTTCTTCTTTTTTTTTTCGTTTCTCTTTTTTTTTCTTTCTTGC 158
***** **************************** **** ******************
consensus_696#0 TCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTCGGA 299
consensus_696#1 TCTCGAATATCGGAAAAGCGACGTAACCGCTGCATTCGAAGATCGGGCCACTGTCTC--- 215
*********************************************************
consensus_696#0 AACTCGGAAGAGAAAAAAAAAAAAAAGGAAAAAAAGAAGAAGAAAACCCATTTATTTCGG 359
consensus_696#1 ------------------------------------------------------------
consensus_696#0 CGTGTACAAAGTACAAAGTTTCTAATTTTTTCTCTCTTTTTCTTTTATTTTCGCTTCTTC 419
consensus_696#1 ------------------------------------------------------------
consensus_696#0 TCGAAAAAAGATATATTAACATTAACATGGTAAAATTCGAAAAATTGATTGCCACGCACG 479
consensus_696#1 ------------------------------------------------------------
consensus_696#0 AAAGTTGCACAAGCCCGACAGACTGAAAAATATTCCT 516
consensus_696#1 -------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |