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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_756#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 647 fasta sequence
[GGGTGTAAACTACCCTCTTGATGTCTTCCTTGGATCCAATTTCATTTAAAAACTTCCCATATTTCGGAATGCAACGGGAAAAGTTATCGCTTTTCATCGTCAACATTGGATTACTGTTTTCCTAACCTAAAAGACAATGTTTGTCCGTTAAATATAATTAATCGTAAATTTCGTTAACTTCGAAAAGAAATATCATAGAAAAGTGTAAACAGTGAAACCTTTATTGTTTTTCTGAATTGTTTAAACCGTTTTGAGTGAAAATGATAATGACGACAATGACAGCTCTTTCTCTTTTTCAACCGCGATCGAAAGTATATACATCGAAATAATGAAATGCTCGTCTAGAAATAAAGCAAAAGAGAGAGAAAGAGAGAGAGAGAGAATAAATGACGAAGAAAAATATAAAAAAATTCGCTTTGTTCAGGAAGCTGTTCGACGCACGGGCGAGAAAATACTTCGGAGAAAAAAGAAGCGGCGCTATTCTTGCGTCCAGGTGTGAGCCTGTAACGCCAGTGTAAATATACAACACTTACGCCATTCCAAAGGAGCCTCTTCGAAAACTATTAACGTATTCCTCTTGTGTTGCGGCTTCGCCGACCATTTTTCCGTTCTGGCCCATTTCTCTTCCCATTGGATCATTTCGGCAC]
[+] EMBL BI504302 [GGGTGTAAACTACCCTCTTGATGTCTTCCTTGGATCCAATTTCATTTAAAAACTTCCCATATTTCGGAATGCAACGGGAAAAGTTATCGCTTTTCATCGTCAACATTGGATTACTGTTTTCCTAACCTAAAAGACAATGTTTGTCCGTTAAATATAATTAATCGTAAATTTCGTTAACTTCGAAAAGAAATATCATAGAAAAGTGTAAACAGTGAAACCTTTATTGTTTTTCTGAATTGTTTAAACCGTTTTGAGTGAAAATGATAATGACGACAATGACAGCTCTTTCTCTTTTTCAACCGCGATCGAAAGTATATACATCGAAATAATGAAATGCTCGTCTAGAAATAAAGCAAAAGAGAGAGAAAGAGAGAGAGAGAGAATAAATGACGAAGAAAAATATAAAAAAATTCGCTTTGTTCAGGAAGCTGTTCGACGCACGGGCGAGAAAATACTTCGGAGAAAAAAGAAGCGGCGCTATTCTTGCGTCCAGGTGTGAGCCTGTAACGCCAGTGTAAATATACAACACTTACGCCATTCCAAAGGAGCCTCTTCGAAAACTATTAACGTATTCCTCTTGTGTTGCGGCTTCGCCGACCATTTTTCCGTTCTGGCCCATTTCTCTTCCCATTGGATCATTTCGGCAC]
[+] EMBL BI504575 [GGGTGTAAACTACCCTCTTGATGTCTTCCTTGGATCCAATTTCATTTAAAAACTTCCCATATTTCGGAATGCAACGGGAAAAGTTATCGCTTTTCATCGTCAACATTGGATTACTGTTTTCCTAACCTAAAAGACAATGTTTGTCCGTTAAATATAATTAATCGTAAATTTCGTTAACTTCGAAAAGAAATATCATAGAAAAGTGTAAACAGTGAAACCTTTATTGTTTTTCTGAATTGTTTAAACCGTTTTGAGTGAAAATGATAATGACGACAATGACAGCTCTTTCTCTTTTTCAACCGCGATCGAAAGTATATACATCGAAATAATGAAATGCTCGTCTAGAAATAAAGCAAAAGAGAGAGAAAGAGAGAGAGAGAGAATAAATGACGAAGAAAAATATAAAAAAATTCGCTTTGTTCAGGAAGCTGTTCGACGCACGGGCGAGAAAATACTTCGGAGAAAAAAGAAGCGGCGCTATTCTTGCGTCCAGGTGTGAGCCTGTAACGCCAGTGTAAATATACAACACTTACGCCATTCCAAAGGAG ]
consensusID : consensus_756#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 359 fasta sequence
[TTCGAAGTATTGTCTTTCGAATATACGTTTTTCCAGTTGTATCCCGTCATTTAAGAATCGGCCATCGTACGTGAAAACACAAACATTCCTCATCTTCGTGTCAGCTTCTTTATTATTTTAGACCATCCCCTCTTACGACCACCATCTGCATGCATACCGACGCTGTTCCGGTACTCAAGGAAAATCGGCGATCAGCAACTTAAGCGGGTGTAAACTACCCTCTTGATGTCTTCCTTGGATCCAATTTCATTTAAAAACTTCCCATATTTCGGAATGCAACGGGAAAAGTTATCGCTTTTCATCGTCAACATTGGATTACTGTTTTCCTAACGCCATTCCAAAGGAGCCTCTTCGAAAAC]
[-] EMBL BI507508 [TTCGAAGTATTGTCTTTCGAATATACGTTTTTCCAGTTGTATCCCGTCATTTAAGAATCGGCCATCGTACGTGAAAACACAAACATTCCTCATCTTCGTGTCAGCTTCTTTATTATTTTAGACCATCCCCTCTTACGACCACCATCTGCATGCATACCGACGCTGTTCCGGTACTCAAGGAAAATCGGCGATCAGCAACTTAAGCGGGTGTAAACTACCCTCTTGATGTCTTCCTTGGATCCAATTTCATTTAAAAACTTCCCATATTTCGGAATGCAACGGGAAAAGTTATCGCTTTTCATCGTCAACATTGGATTACTGTTTTCCTAACGCCATTCCAAAGGAGCCTCTTCGAAAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_756#0 GGGTGTAAACTACCCTCTTGATGTCTTCCTTGGATCCAATTTCATTTAAAAACTTCCCAT 60
consensus_756#1 ------------------------------------------------------------
consensus_756#0 ATTTCGGAATGCAACGGGAAAAGTTATCGCTTTTCATCGTCAACATTGGATTACTGTTTT 120
consensus_756#1 ------------------------------------------------------------
consensus_756#0 CCTAACCTAAAAGACAATGTTTGTCCGTTAAATATAATTAATCGTAAATTTCGTTAACTT 180
consensus_756#1 -------TTCGAAGTATTGTCTTTCGAATATACGTTTTTCCAGTTGTATCCCGTCA-TTT 52
* * * *** * ** ** * * ** * ** *** * **
consensus_756#0 CGAAAAGAAATATCATAGAAAAGTGTAAACAGTGAAACCTTTATTGTTTTTCTGAATTGT 240
consensus_756#1 AAGAATCGGCCATCGTA----CGTGAAAACA--CAAACATTCCTCATCTTCGTG------ 100
** *** ** *** ***** **** ** * * ** **
consensus_756#0 TTAAACCGTTTTGAGTGAAAATGATAATGACGACAATGACAGCTCTTTCTCTTTTTCAAC 300
consensus_756#1 -TCAGCTTCTTT--------------------ATTATTTTAGACCATCCCCTCTTACGAC 139
* * * *** * ** ** * * * ** ** * **
consensus_756#0 CGCGATCGAAAGTATATACATCGAAATAATGAAATGCTCGTCTAGAAATAAAGCAAAAGA 360
consensus_756#1 CACCATCT---GCATGCATACCG----------ACGCTGTTCCGGTACTCAAGGAAAATC 186
* * *** * ** * * ** * *** ** * * * *** ****
consensus_756#0 GA-GAGAAAGAGAGAGAGAGAGAATAAATGACGAAGAAAAATATAAAAAAATTCGCTTTG 419
consensus_756#1 GGCGATCAGCAACTTAAGCGGGTGTAAACTAC---------CCTCTTGATGTCTTCCTTG 237
* ** * * ** * * **** ** * * * * ***
consensus_756#0 TTCAGGAAGCTGTTCGACGCACGGGCGAGAAAATACTTCGGAGAAAAAAGAAGCGGCGCT 479
consensus_756#1 -----GATCCAATTTCATTTAAAAACTTCCCA-TATTTCGGAATGCAACG----GGAAAA 287
** * ** * * * * ** ****** ** * **
consensus_756#0 ATTCTTGCGTCCAGGTGTGAGCCTGTAACGCCAGTGTAAATATACAACACTTACGCCATT 539
consensus_756#1 GTTATCGCTTTTCATCGTCAACATTGGATTACTGTTT----------TCCTAACGCCATT 337
** * ** * ** * * * * * ** * ** ********
consensus_756#0 CCAAAGGAGCCTCTTCGAAAACTATTAACGTATTCCTCTTGTGTTGCGGCTTCGCCGACC 599
consensus_756#1 CCAAAGGAGCCTCTTCGAAAAC-------------------------------------- 359
**********************
consensus_756#0 ATTTTTCCGTTCTGGCCCATTTCTCTTCCCATTGGATCATTTCGGCAC 647
consensus_756#1 ------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |