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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_768#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 640 fasta sequence
[AAAATCGAAGTAATTTTTTCATGAACAATAACGACGGATGTTTTTTATCGCGAAGAAGATGCGATTATAAAATGGAATCAATCCACGACGCGGTTTAGCTTTACAACGGATTAATCGTGCGTTTCAGTGAACTGACCGAATTGCATTCGCCATTGTTGTGATTGGTGAACGTTCCAGAGAAGACGGCGTTCTTAGATTGACGCGCATGCGCATTACGTTCTACTTGACGACGCTCTTCTTTCGAATTTTGGGAGACACGCATACACAAAGCAACAAGGCACAGGTAATTTCTAGAGTGAAAAATAATGAAAAAGTACTTTATATATGAAATGATATGTAAGAAAAATTAATAAGTACCAAGAAAGAAAACAAAGTTACGCTTAATTATTAACGTATGCACAAAGTATATTTTCTGAGAAGTTTGATATTTAAAATACATAAAAATGACAGTTTACATAGATGATTGTACCTATACTGTGCGTAATTGCATGTTATGCCTAAGGCTAAAAAAAAATCTTACCTTAAAAAGGTAAGAGAAATGCGAGAATATAGAAGACAAAAATTAAAGTCAGAAACATTAGAAGAACGTACTATTAGATTATTTTCTGCTGCTGAAAGAATGAAGAACGCTAGGGCAAAG]
[+] EMBL BI504872 [AAAATCGAAGTAATTTTTTCATGAACAATAACGACGGATGTTTTTTATCGCGAAGAAGATGCGATTATAAAATGGAATCAATCCACGACGCGGTTTAGCTTTACAACGGATTAATCGTGCGTTTCAGTGAACTGACCGAATTGCATTCGCCATTGTTGTGATTGGTGAACGTTCCAGAGAAGACGGCGTTCTTAGATTGACGCGCATGCGCATTACGTTCTACTTGACGACGCTCTTCTTTCGAATTTTGGGAGACACGCATACACAAAGCAACAAGGCACAGGTAATTTCTAGAGTGAAAAATAATGAAAAAGTACTTTATATATGAAATGATATGTAAGAAAAATTAATAAGTACCAAGAAAGAAAACAAAGTTACGCTTAATTATTAACGTATGCACAAAGTATATTTTCTGAGAAGTTTGATATTTAAAATACATAAAAATGACAGTTTACATAGATGATTGTACCTATACTGTGCGTAATTGCATGTTATGCCTAAGGCTAAAAAAAAATCTTACCTTAAAAAGGTAAGAGAAATGCGAGAATATAGAAGACAAAAATTAAAGTCAGAA ]
[+] EMBL BI509816 [ ATTATAAAATGGAATCAATCCACGACGCGGTTTAGCTTTACAACGGATTAATCGTGCGTTTCAGTGAACTGACCGAATTGCATTCGCCATTGTTGTGATTGGTGAACGTTCCAGAGAAGACGGCGTTCTTAGATTGACGCGCATGCGCATTACGTTCTACTTGACGACGCTCTTCTTTCGAATTTTGGGAGACACGCATACACAAAGCAACAAGGCACAGGTAATTTCTAGAGTGAAAAATAATGAAAAAGTACTTTATATATGAAATGATATGTAAGAAAAATTAATAAGTACCAAGAAAGAAAACAAAGTTACGCTTAATTATTAACGTATGCACAAAGTATATTTTCTGAGAAGTTTGATATTTAAAATACATAAAAATGACAGTTTACATAGATGATTGTACCTATACTGTGCGTAATTGCATGTTATGCCTAAGGCTAAAAAAAAATCTTACCTTAAAAAGGTAAGAGAAATGCGAGAATATAGAAGACAAAAATTAAAGTCAGAAACATTAGAAGAACGTACTATTAGATTATTTTCTGCTGCTGAAAGAATGAAGAACGCTAGGGCAAAG]
consensusID : consensus_768#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 551 fasta sequence
[TTCTTCGCGATAAAACACATCCGTCGTTATTGTTCATGAAAAAATTACTTCGATTTTTCTTAAGATATACCGCAGACAAACGCACAAAAGCAATATCGGCCGACATGTAAGATTTTCGTTCGGAGCCACTTTAAGGGGCCAAGCGGGGTCGCCGATAGGCTGCGTGTGACGTGGTTGCGTTTATTGACCATAACCCCTTCCTACTCCCGTCTGCAACTTCACGACGGACAGGTGTACGACCTGAGAGACCGCAAAACAATTGACCAAACCGACCGCGTCTTAAAATACACGGCATTGTCAGAGAATCAGAAAGATGCTTGGAATGTTCGACCTCTTATCGTGTCCACTGATGGTGTTATTATTCTTCCTTTTCATCAATAATATGATTGTTTTCTGCAAAATATTCAACTCACGACGAGAAGGTGAGACTTACAATGAGCTCGTCAGGAAGATATATTTTTAATAAACTTTCGTGAAAGAATTTAAATTATTCAATGATAATTCATAATATTGATATTCATATGAAAAAATTAATATCTAAAATTCTTAAT]
[+] EMBL BI507270 [TTCTTCGCGATAAAACACATCCGTCGTTATTGTTCATGAAAAAATTACTTCGATTTTTCTTAAGATATACCGCAGACAAACGCACAAAAGCAATATCGGCCGACATGTAAGATTTTCGTTCGGAGCCACTTTAAGGGGCCAAGCGGGGTCGCCGATAGGCTGCGTGTGACGTGGTTGCGTTTATTGACCATAACCCCTTCCTACTCCCGTCTGCAACTTCACGACGGACAGGTGTACGACCTGAGAGACCGCAAAACAATTGACCAAACCGACCGCGTCTTAAAATACACGGCATTGTCAGAGAATCAGAAAGATGCTTGGAATGTTCGACCTCTTATCGTGTCCACTGATGGTGTTATTATTCTTCCTTTTCATCAATAATATGATTGTTTTCTGCAAAATATTCAACTCACGACGAGAAGGTGAGACTTACAATGAGCTCGTCAGGAAGATATATTTTTAATAAACTTTCGTGAAAGAATTTAAATTATTCAATGATAATTCATAATATTGATATTCATATGAAAAAATTAATATCTAAAATTCTTAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_768#0 AAAATCGAAGTAATTTTTTCATGAACAATAACGACGGATGTTTTTTATCGCGAAGAAGAT 60
consensus_768#1 --------------TTCTTCGCGATAAAACACATCCGTCGTTATTGTTCATGAAAAAATT 46
** *** ** ** ** * * *** ** ** *** ** *
consensus_768#0 GCGATTATAAAATGGAATCAATCCACGACGCGGTTTAGCTTTACAACGGATTAATCGTGC 120
consensus_768#1 ACT----TCGATTTTTCTTAAGATATACCGCAGACAAACGC-ACAAAAGCAATATCGGCC 101
* * * * * ** * *** * * * **** * **** *
consensus_768#0 GTTTCAGTGAACTGACCGAATTGCATTCGCCATTGTTGTGATTGGTGAACGTTCCAGAGA 180
consensus_768#1 G--------ACATGTAAGATTTTCGTTCGGAGCCACTTTAAGGGGCCAAG----CGGGGT 149
* * ** ** ** * **** * * * ** ** * * *
consensus_768#0 AGACGGCGTTCTTAGATTGACGCGCATGCGC--ATTACGTTCTACTTGACGACGCTCTTC 238
consensus_768#1 CGCCGATAGGCTGCGTGTGACGTGGTTGCGTTTATTGACCATAACCCCTTCCTACTCCCG 209
* ** ** * ***** * **** *** ** ***
consensus_768#0 TTTCGAATTTTGGGAGACACGCATACACAAAGCAACAAGGCACAGGTAATTTCTAGAGTG 298
consensus_768#1 TCTGCAACTTCACGACGGACAGGTGTACGACCTGAGAGACCGCAAA--------ACAATT 261
* * ** ** ** ** * ** * * * * ** * * *
consensus_768#0 AAAAATAATGAAAAAGTACTTTATATATGAAATGATATGTAAGAAAAATTAATAAGTACC 358
consensus_768#1 GACCAAACCGACCGCGT-CTTAAAATACACGGCAT--TGTCAGAGAATCAGAAAGATGCT 318
* * * ** ** *** * *** *** *** ** * * * *
consensus_768#0 AAGAAAGAAAACAAAGTTACGCTTAATTATTAACGTATGCACAAAGTATATTTTCTGAGA 418
consensus_768#1 TGGAATGTTCGACCTCTTAT-CGTGTCCACTGATG-GTGTTATTATTCTTCCTTTTCATC 376
*** * *** * * * * * * ** * * * ** * *
consensus_768#0 AGTTTGATATTTAAAATACATAAAAATGACAGTTTACAT--AGATGATTGTACCTATACT 476
consensus_768#1 AATAATATGATTGTTTTCTGCAAAATATTCAACTCACGACGAGAAGGTGAGACTTACAAT 436
* * ** ** * **** ** * ** *** * * ** ** * *
consensus_768#0 GTGCGTAATTGCATGTTATGCCTAAGGCTAAAAAAAAATCTTACCTTAAAAAGGTAAGAG 536
consensus_768#1 GAGCTCGTCAGGAAGATATATTT----TTAATAAA----CTTTCGTGAAAGAATTTAAAT 488
* ** * * * *** * *** *** *** * * *** * * * *
consensus_768#0 AAAT--GCGAGAATATAGAAGACAAAAATTAAAGTCAGAAACATTAGAAGAACGTACTAT 594
consensus_768#1 TATTCAATGATAATTCATAATATTGATATTCATATGAAAAA-ATTAATATCTAAAATTCT 547
* * ** *** * ** * * *** * * * *** **** * * * *
consensus_768#0 TAGATTATTTTCTGCTGCTGAAAGAATGAAGAACGCTAGGGCAAAG 640
consensus_768#1 TAAT------------------------------------------ 551
**
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |