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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_786#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 998 fasta sequence
[ACCGAGTCGATCAACTTCAAGGACGCCGTGTCCAACAGACTGTTGATATCCGAGAGAGGCAGCGACCCGAGAATACCCGCCCTCACCAGGTACAAGCAGAGTAACAGCATAGGCGTGCTCGACATCACGAACAACAAAACTCTTCCCTGGCTGCAATCCAAGCTGGAAAGTTTGATCACCAAGTACCACGTGGACTCGTTCTACCTCGACCTGGGTACCGCCCAGGACATGCCCCACTACTACAAATGCGGCCAGCCGTTGATCAACCCGGATCATTACAAAACCATGTTCACGAGGTCGATATTGGGATCGGTTCCCGTGATCGGCGTCTCGGGGGCGATCTCCAGGCCTCGAGCCCCCGTCTTCGTCTCCCTTCCCCCGTTCTCCTCCTCGTGGAAGGCGATCAAGACCGTGATACCGACGATTCTCACCTACGGTATACTCGGTTACCCGTTCATCATGCCGGGCGCGGTCGNCGGGGACGTGGCCCTCCCCATGTCCGACAACAACCCGGACAACGACTTCGAGGTGAGCCTGCCCGACAAGGAGCTGTACGTCAGATGGTTGCAACTGTCCACCTTCCTCCCCGTCATACGTTTCACCCATCTGCCGAGCAAATACTCGGACGATTCCGTGCTCGAGATAGCGAAGAGGTTGACGAGCCTCAGACAGAAAACGGTCACTCCTCTTCTCAAGAAATACGCGAACGAGACCCTGGACACCGGCCTGCCCATCATACGACCTTTGTGGATGCTAGACCCGACCGATCCCGCTTGCCTGGTTGTCTACGACGAGTTTTCCGTGGGGGAGGAGCTGATCGTCGCCCCCATCCTTCACTCCGGGAGCAGGCAGAGGGAGATCTACTTGCCTGCCGGCGTTTGGAGGGACGGGATCGACGGTAGCCTGAGGAAGGGCTCCAGATGGATCCACAATTACAGGGTTGCCGAGGACAAGGTCGCGTATTTCGTCAAGATACCTGACAACACGAGATTTTAATT]
[+] EMBL BI503977 [ACCGAGTCGATCAACTTCAAGGACGCCGTGTCCAACAGACTGTTGATATCCGAGAGAGGCAGCGACCCGAGAATACCCGCCCTCACCAGGTACAAGCAGAGTAACAGCATAGGCGTGCTCGACATCACGAACAACAAAACTCTTCCCTGGCTGCAATCCAAGCTGGAAAGTTTGATCACCAAGTACCACGTGGACTCGTTCTACCTCGACCTGGGTACCGCCCAGGACATGCCCCACTACTACAAATGCGGCCAGCCGTTGATCAACCCGGATCATTACAAAACCATGTTCACGAGGTCGATATTGGGATCGGTTCCCGTGATCGGCGTCTCGGGGGCGATCTCCAGGCCTCGAGCCCCCGTCTTCGTCTCCCTTCCCCCGTTCTCCTCCTCGTGGAAGGCGATCAAGACCGTGATACCGACGATTCTCACCTACGGTATACTCGGTTACCCGTTCATCATGCCGGGCGCGGTCGNCGGGGACGTGGCCCTCCCCATGTCCGACAACAACCCGGACAACGACTTCGAGGTGAGCCTGCCCGACAAGGAGCTGTACGTCAGATGGTTGCAACTGTCCACCTTCCTCCCCGTCATACGTTTCACCCATCTGCCGAGCAAATACTCGGACGATTCCG ]
[+] EMBL BI507554 [ CCCGTTCATCATGCCGGGCGCGGTCGGCGGGGACGTGGCCCTCCCCATGTCCGACAACAACCCGGACAACGACTTCGAGGTGAGCCTGCCCGACAAGGAGCTGTACGTCAGATGGTTGCAACTGTCCACCTTCCTCCCCGTCATACGTTTCACCCATCTGCCGAGCAAATACTCGGACGATTCCGTGCTCGAGATAGCGAAGAGGTTGACGAGCCTCAGACAGAAAACGGTCACTCCTCTTCTCAAGAAATACGCGAACGAGACCCTGGACACCGGCCTGCCCATCATACGACCTTTGTGGATGCTAGACCCGACCGATCCCGCTTGCCTGGTTGTCTACGACGAGTTTTCCGTGGGGGAGGAGCTGATCGTCGCCCCCATCCTTCACTCCGGGAGCAGGCAGAGGGAGATCTACTTGCCTGCCGGCGTTTGGAGGGACGGGATCGACGGTAGCCTGAGGAAGGGCTCCAGATGGATCCACAATTACAGGGTTGCCGAGGACAAGGTCGCGTATTTCGTCAAGATACCTGACAACACGAGATTTTAATT]
consensusID : consensus_786#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 497 fasta sequence
[GCTCTACGTTTCCATCAGGGCGAACAGGACCAATCACTTTTGCCTCGAGGCCAAACACGACGCGTTCGCCTACATCAATTACCTAACCCCTTATCCCCAATTGAACTACACCATATGCGCCGGGGACAACATGAAGAATTTGCACTCGTCGATGGCCGAGAAGTCGTTGTGGGACGGCCTCAAGCCGGACGAGCTGTCCGCCGTCCACTCTCTCCTCACCGAGCCTGTATGGCAGATATCCCCCACCAGCGAGCCGGCCGTTTACAACTACACCGAGGACGTGATCGCTCTGCCGTTCCTGCGCCAAGGCCACGTGTTGCTCAGCGAGGAGTGGCAACCGAGCGCCGGCGACTTCGCCCTTGACGAGGAACGCTTCCCCTCCATGGAGGAGACTATCAATATCATTCACCGTAGGGGGTTCAGGATCGTGTTCACCGTGCAACCGTTCATATCCACCGAGTCGATCAACTTCAAGGACGCCGTGTCCAACAGACTGT]
[+] EMBL BI507656 [GCTCTACGTTTCCATCAGGGCGAACAGGACCAATCACTTTTGCCTCGAGGCCAAACACGACGCGTTCGCCTACATCAATTACCTAACCCCTTATCCCCAATTGAACTACACCATATGCGCCGGGGACAACATGAAGAATTTGCACTCGTCGATGGCCGAGAAGTCGTTGTGGGACGGCCTCAAGCCGGACGAGCTGTCCGCCGTCCACTCTCTCCTCACCGAGCCTGTATGGCAGATATCCCCCACCAGCGAGCCGGCCGTTTACAACTACACCGAGGACGTGATCGCTCTGCCGTTCCTGCGCCAAGGCCACGTGTTGCTCAGCGAGGAGTGGCAACCGAGCGCCGGCGACTTCGCCCTTGACGAGGAACGCTTCCCCTCCATGGAGGAGACTATCAATATCATTCACCGTAGGGGGTTCAGGATCGTGTTCACCGTGCAACCGTTCATATCCACCGAGTCGATCAACTTCAAGGACGCCGTGTCCAACAGACTGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_786#0 ACCGAGTCGATCAACTTCAAGGACGCCGTGTCCAACAGACTGTTGATATCCGAGAGAGGC 60
consensus_786#1 ------------------------------------------------------------
consensus_786#0 AGCGACCCGAGAATACCCGCCCTCACCAGGTACAAGCAGAGTAACAGCATAGGCGTGCTC 120
consensus_786#1 ------------------------------------------------------------
consensus_786#0 GACATCACGAACAACAAAACTCTTCCCTGGCTGCAATCCAAGCTGGAAAGTTTGATCACC 180
consensus_786#1 -----------------------------------------GCTCTACGTTTCCATCAGG 19
*** * ** ****
consensus_786#0 AAGTACCACGTGGACTCGTTCTACCTCGACCTGGGTACCGCCCAGGACATGCCCCACTAC 240
consensus_786#1 GCGAACAGGACCAATCACTTTTGCCTCGAG------GCCAAACACGACGCGTTCGCCTAC 73
* ** * ** * ****** ** ** *** * * ****
consensus_786#0 TACAAATGCGGCCAGCCGTTGATCAACCCGGATCATTACAAAACCATGTTCAC-GAGGTC 299
consensus_786#1 ATCAATTAC--CTAACCCCTTATC--CCCAATTGA--ACTACACCATATGCGCCGGGGAC 127
*** * * * * ** * *** *** * * ** * ***** * * * * ** *
consensus_786#0 GATATTGGGA-TCGGTTCCCGTGATCGGCGTCTCGGGGGCGATCTCCAGGCCTCGAGCCC 358
consensus_786#1 AACATGAAGAATTTGCACTCGTCGATGGCCGAGAAGTCGTTGTGGGACGGCCTCAAGCCG 187
* ** ** * * * *** *** * * * ****** ****
consensus_786#0 CCGTCTTCGTCTCCCTTCCCCCGTTCTCCTCCTCGTGGAAGGCGATCAAGACCGTGATAC 418
consensus_786#1 GACGAGCTGTCCGCCGTCCACT-CTCTCCTCACCGAGCCTGTATGGCAGATATCCCCCAC 246
*** ** *** * ******* ** * * ** **
consensus_786#0 CGACGATTC--TCACCTACGGTATACTCGGTTACCCGTTCATCATGCCGGGCGCGGTCGN 476
consensus_786#1 CAGCGAGCCGGCCGTTTACAACTACACCGAGGACGTGATCGCTCTGCCGTTCCTGCGCCA 306
* *** * * *** ** ** * ** ***** * * *
consensus_786#0 CGGGGACGTGGCCCTCCCC-ATGTCCGACAACAACCCGGACAACGACTTCGAGGTGAGCC 535
consensus_786#1 AGGCCACGTGTTGCTCAGCGAGGAGTGGCAACCGAGCGC-CGGCGACTTCG--------- 356
** ***** *** * * * * **** ** * ********
consensus_786#0 TGCCCGACAAGGAGCTGTACGTCAG-ATGGTTGCAACTGTCCACCTTCCTCCCCGTCATA 594
consensus_786#1 CCCTTGACGAGGAACGCTTCCCCTCCATGGAGGAGACTATCAATATCATTCACCGTAGGG 416
* *** **** * * * * **** * *** ** * * ** ****
consensus_786#0 CGTTTCA---CCCATCTGCCGAGCAAATACTCGGACGATTCCGTGCTCGAGATAGCGAAG 651
consensus_786#1 GGTTCAGGATCGTGTTCACCGTGCAACCGTTCATATC-CACCGAG-TCGAT-CAACTTCA 473
*** * * *** **** ** * *** * **** * *
consensus_786#0 AGGTTGACGAGCCTCAGACAGAAAACGGTCACTCCTCTTCTCAAGAAATACGCGAACGAG 711
consensus_786#1 AGGACGCCGTGTCC--AACAGACTGT---------------------------------- 497
*** * ** * * *****
consensus_786#0 ACCCTGGACACCGGCCTGCCCATCATACGACCTTTGTGGATGCTAGACCCGACCGATCCC 771
consensus_786#1 ------------------------------------------------------------
consensus_786#0 GCTTGCCTGGTTGTCTACGACGAGTTTTCCGTGGGGGAGGAGCTGATCGTCGCCCCCATC 831
consensus_786#1 ------------------------------------------------------------
consensus_786#0 CTTCACTCCGGGAGCAGGCAGAGGGAGATCTACTTGCCTGCCGGCGTTTGGAGGGACGGG 891
consensus_786#1 ------------------------------------------------------------
consensus_786#0 ATCGACGGTAGCCTGAGGAAGGGCTCCAGATGGATCCACAATTACAGGGTTGCCGAGGAC 951
consensus_786#1 ------------------------------------------------------------
consensus_786#0 AAGGTCGCGTATTTCGTCAAGATACCTGACAACACGAGATTTTAATT 998
consensus_786#1 -----------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |