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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1811 fasta sequence
[CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT-AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAATGAGCCCA-CCGCTGCTGCCATTGCTTATGGCTTGGATAAAAAAACTACCAGCGAACGCAACGTCCTTATCTTTGATCTTGGTGGTGGCACCTTTGATGTCTCAATTCTGACCATTGAAGATGGCATTTTCGAGGTCAAGTCAACAGCAGGAGATACCCATCTTGGCGGCGAAGATTTTGATAACCGTATGGGTAATCACTTTGTACAAGAATTCAAACGGAAATATAAAAAAGATTTAACTGCAAATAAACGCGC-TCTTCGTCGTTTGAGAACAGCTTGTGAGCGTGCGAAACGCAC-TCTGTCTTCGTCTACTCAAGCTAGCATTGAAATTGATTCGCTCTATGAGGGAATCGATTTTTATACATCGATCACCAGAGCTCGATTTGAAGAACTCTGTGCTGATCTCTTCAGAGGAACACTCGAGCCAGTAGAAAAATCATTACGCGATGCTAAAATGGATAAAGCTCAGATTCACGATATCGTTCTGGTTGGTGGATCCACGCGAATTCCTAAGATTCAAAAACTTCTGCAAAGACTTCTTCAATGGAAAGGAATTGAATAAATCTATCAATCCTGATGAGGCTGTGGCATATGGAGCTGCTGTGC-AAGCTGCCATTCTTCATGGTGATAAATCTGAAGAAGTACAAGATCTATTACTTCTTGATGTAACACCTCTATCTCTTGGTATTGAAACTGCTGGTGGTGTTATGACTGCTCTTATTAAGAGAAATACTACCATTCCAACAAAGCAAACTCAAACCTTCACTACATATGCTGATAATCAACCAGGTGTATTGATTCAAGTCTATGAAGGAGAACGTGCTATGACGAAAGATAACAATCTGTTAGGTAAATTTGAGCTCAGCGGCATTCCTCCAGCTCCTCGAGGAGTTCCTCAAATTGAAGTCACCTTTGATATCGATGCCAATGGTATTCTCAATGTCTCTGCAGTTGATAAATCTACTGGTAAAGAGAACAAAATCACTATTACCAACGATAAAGGTCGTCTCAGCAAAGAAGATATCGAAAGGATGGTCAACGAAGCTGAGAAATATCGTAGCGAAGACGAAAAACAAAAAGAAACTATCGCTGCTAAGAATGGTCTTGAGTCTTACTGCTTCAACATGAAGAGTACAGTGGAAGANNAGAAGTTGAAGGATAAAATCAGCGCCAGTGACAAACAAGTTGTACTGGATAAATGCAACGATATCATT]
[+] EMBL BI946410 [CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAACGAGCCCACCCGCTGCTGCCATTGCTTATGGCT ]
[+] EMBL BE844576 [CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAAAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAATGAGCCCA CCGCTGCT ]
[+] EMBL BI946539 [CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAAATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGTAAATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGAC ]
[+] EMBL BE844580 [CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAAAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCTAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTGTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGATGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGA ]
[+] EMBL BI946535 [CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAAATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATG TTTACGTATTATTAACGAGCCCACCCGCTGCTGCCAT ]
[+] EMBL BI946426 [CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAAATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCACGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTt ]
[+] EMBL BI946413 [ TTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAACGAGCCCA CCGCTGCTGCCATTGCTg ]
[+] EMBL BI946533 [ TTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAAAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAATGAGCCCA CCGCTGCTGCCATTGCTT ]
[+] EMBL BI512241 [ ATTTTTACCAAGCGAACAAAGAAGAAAGAAAAGCAAAAATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGA ]
[+] EMBL BI512627 [ GTATTGATCTTGGCACTACTTATTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAAAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAAT ]
[+] EMBL BI511692 [ GTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAATCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGCCAAAAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGC ]
[+] EMBL BI946530 [ CACCATTTTCGATGCCAAACGTCTTATTGGTCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGTAAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAATGAGCCCA CCGCTGCTGCCATTGCTTATGGCTTGGATAAAAAAACTACCAGCGAACGCAACGTCCTTATCTTTGATCTTGGTGGTGGCACCTTTGATGTCTCAATTCTGACCATTGAAGATGGCATTTTCGAGGTCAAGTCAACAGCAGGAGATACCCATCTTGGTGGCGAAGATTTTGATAACCGTATGGGTAATCACTTTGTACAAGAATTCAAACGTAAATATAA ]
[+] EMBL BI510653 [ CCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTTCCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCTGGGAAAAACTGTCAGT AATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCGTCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAATGAGCCCA CCGCTGCTGCCATTGCTTATGGCTTGGATAAAAAAACTACCAGCGAACGCAACGTCC ]
[+] EMBL BI946442 [ CTTTGATCTTGGTGGTGGCACCTTTGATGTCTCAATTCTGACCATTGAAGATGGCATTTTCGAGGTCAAGTCAACAGCAGGAGATACCCATCTTGGCGGCGAAGATTTTGATAACCGTATGGTTAATCACTTTGTACAAGAATTCAAACGGAAATATAAAAAAGATTTAACTGCAAATAAACGCGC TCTTCGTCGTTTGAGAACAGCTTGTGAGCGTGCGAAACGCAC TCTGTCTTCGTCTACTCAAGCTAGCATTGAAATTGATTCGCTCTATGAGGGAATCGATTTTTATACATCGATCACCAGAGCTCGATTTGAAGAACTCTGTGCTGATCTCTTCAGAGGAACACTCGAGCCAGTAGAAAAATCATTACGCGATGCTAAAATGGATAAAGCTCAGATTCACGATATCGTTCTGGTTGGTGGATCCACGCGAATTCCTAAGATTCAAAAACTTCTGCAAAGACTTCTTCAATGGAAAGGAATTGAATAAATCTATCAATCCTGATGAGGCTGTGGCATATGGAGCTGCTGTGCAAAGCTGCCATTCTTCATGGTGATAAATCTGAAGAAGTA ]
[-] EMBL BI946540 [ GCGCTTCTTCGTCGTTTGAG ACAGCTTGTGAGCGTGCGAAACGCACTTCTGTCTTCGTCTACTCAAGCTAGCATTGAAATTGATTCGCTCTATGAGGGAATCGATTTTTATACATCGATCACCAGAGCTCGATTTGAAGAACTCTGTGCTGATCTCTTCAGAGGAACACTCGAGCCAGTAGAAAAATCATTACGCGATGCTAAAATGGATAAAGCTCAGATTCACGATATCGTTCTGGTTGGTGGATCCACGCGAATTCCTAAGATTCAAAAACTTCTGC AAGACTTCTTCAATGGAAAGGAATTGAATAAATCTATCAATCCTGATGAGGCTGTGGCATATGGAGCTGCTGTGC AAGCTGCCATTCTTCATGGTGATAAATCTGAAGAAGTACAAGATCTATTACTTCTTGATGTAACACCTCTATCTCTTGGTATTGAAACTGCTGGTGGTGTTATGACTGCTCTTATTAAGAGAAATACTACCATTCCAACAAAGCAAACTCAAACCTTCACTACATATGCTGATAATCAACCAGGTGTATTGATTCAAGTCTATGAAGGAGAACGTGCTATGACGAAAGATAACAATCTGTTAGGTAAATTTGAGCTCAGCGG ]
[+] EMBL BI504420 [ CATATGGAGCTGCTGTGC AAGCTGCCATTCTTCATGGTGATAAATCTGAAGAAGTACAAGATCTATTACTTCTTGATGTAACACCTCTATCTCTTGGTATTGAAACTGCTGGTGGTGTTATGACTGCTCTTATTAAGAGAAATACTACCATTCCAACAAAGCAAACTCAAACCTTCACTACATATGCTGATAATCAACCAGGTGTATTGATTCAAGTCTATGAAGGAGAACGTGCTATGACGAAAGATAACAATCTGTTAGGTAAATTTGAGCTCAGCGGCATTCCTCCAGCTCCTCGAGGAGTTCCTCAAATTGAAGTCACCTTTGATATCGATGCCAATGGTATTCTCAATGTCTCTGCAGTTGATAAATCTACTGGTAAAGAGAACAAAATCACTATTACCAACGATAAAGGTCGTCTCAGCAAAGAAGATATCGAAAGGATGGTCAACGAAGCTGAGAAATATCGTAGCGAAGACGAAAAACAAAAAGAAACTATCGCTGCTAAGAATGGTCTTGAGTCTTACTGCTTCAACATGAAGAGTACAGTGGAAGANNAGAAGTTGAAGGATAAAATCAGCGCCAGTGACAAACAAGTTGTACTGGATAAATGCAACGATATCATT]
consensusID : consensus_8#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 620 fasta sequence
[ATCAGCGCCAGTGACAAACAAGTTGTACTGGATAAATGCAACGATATCATTAAATGGCTCGATGCTAACCAATTAGCTGATAAAGAAGAATACGAACATAAACAGAAAGAATTAGAAGCTATATGCAATCCTATTGTCACAAAATTGTATCAGGGCACTGGTGGGATGCCTGGTGGAATGCCTGGTGGAATGCCTGGTGGCTTCCCAGGAGCTGGTGGCGGTGCTCCTGGTGGTGGTGCATCTGGACCTACCATCGAAGAAGTCGATTAAATCGATTACTCGCTTGCCCACTGCCCTCTCCATGATTTACTCCGTTGCAAAGGATAACAACTTCAAGAACATAGAATTAGACAGCTTCGGTCTTTCGTTCCTAAATATATAATTTATCTAGGTTTTATAATTTTTTTTATATCATTGTAAAAATCACTTCTGATTTATTTATTTTGTTCTACTGTAAAACTAGACAAATAATTTATTTCATTAGTAATTTCCTACAGATTATAATAAACGTAAAAAAAAACTATTGTACTTATATTTTGAAAATNNGGATAAAAAAGATCAGTTGTTGGTTTTCTATGTTCAAAAAACTGAAAATATAAAACAATCCCTGAAATACAAAA]
[-] EMBL BI946531 [ATCAGCGCCAGTGACAAACAAGTTGTACTGGATAAATGCAACGATATCATTAAATGGCTCGATGCTAACCAATTAGCTGATAAAGAAGAATACGAACATAAACAGAAAGAATTAGAAGCTATATGCAATCCTATTGTCACAAAATTGTATCAGGGCACTGGTGGGATGCCTGGTGGAATGCCTGGTGGAATGCCTGGTGGCTTCCCAGGAGCTGGTGGCGGTGCTCCTGGTGGTGGTGCATCTGGACCTACCATCGAAGAAGTCGATTAAATCGATTACTCGCTTGCCCACTGCCCTCTCCATGATTTACTCCGTTGCAAAGGATAACAACTTCAAGAACATAGAATTAGACAGCTTCGGTCTTTCGTTCCTAAATATATAATTTATCTAGGTTTTATAATTTTTTTTATATCATTGTAAAAATCACTTCTGATTTATTTATTTTGTTCTACTGTAAAACTAGACAAATAATTTATTTCATTAGTAATTTCCTACAGATTATAATAAACGTAAAAAAAAACTATTGTACTTATATTTTGAAAATGTGGATAAAAAAGATCAGTTGTTGGTTTTCTATGTTCAAAAAACTGAAAATATAAAACAATCCCTGAAATACAAAA]
[+] EMBL BI516835 [ TCGATGCTAACCAATTAGCTGATAAAGAAGAATACGAACATAAACAGAAAGAATTAGAAGCTATATGCAATCCTATTGTCACAAAATTGTATCAGGGCACTGGTGGGATGCCTGGTGGAATGCCTGGTGGAATGCCTGGTGGCTTCCCAGGAGCTGGTGGCGGTGCTCCTGGTGGTGGTGCATCTGGACCTACCATCGAAGAAGTCGATTAAATCGATTACTCGCTTGCCCACTGCCCTCTCCATGATTTACTCCGTTGCAAAGGATAACAACTTCAAGAACATAGAATTAGACAGCTTCGGTCTTTCGTTCCTAAATATATAATTTATCTAGGTTTTATAATTTTTTTTATATCATTGTAAAAATCACTTCTGATTTATTTATTTTGTTCTACTGTAAAACTAGACAAATAATTTATTTCATTAGTAATTTCCTACAGATTATAATAAACGTAAAAAAAAACTATTGTACTTATATTTTGAAAATNNGGATAAAAAAGATCAGTTGTTGGTTTTCTATGTTCAAAAAACTGAAAA ]
consensusID : consensus_8#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 448 fasta sequence
[CAGTTTTTTGAACATAGAAAACCAACAACTGATCTTTTTTAGGCACATTTTCAAAATAAAAGTACAATAGTTTTTTTTTACGTTTATTATAATCTGTAGGAAATTACTAATGAAATAAATTATTTGTCTAGTTTTACAGTACCAACAAAATAAATAAATCACAAGTGATTTTTACAATGATATAAAAAAAATTATAAAACCTACATCAATTATATATTTAGGAACGAAAGACCGAAGCTGTCTAATTCTATGTTCTTGAAGTTGTTATCCTTTGCAACGGAGTAAATCATGGAGAGGGCAGTGGGCAAGCGAGTATTCGATTTAATCGACTCCTTCGCATGGTAGGTCCCAGATGCATCATCCACCACGTAGCACCGCCACCACCTCCCTTGGGGAAGCCCACCCACTTCATTTCCCCCCAGCGCATTCCCACCACGGCTTCCCCTAC]
[+] EMBL BE844484 [CAGTTTTTTGAACATAGAAAACCAACAACTGATCTTTTTTAGGCACATTTTCAAAATAAAAGTACAATAGTTTTTTTTTACGTTTATTATAATCTGTAGGAAATTACTAATGAAATAAATTATTTGTCTAGTTTTACAGTACCAACAAAATAAATAAATCACAAGTGATTTTTACAATGATATAAAAAAAATTATAAAACCTACATCAATTATATATTTAGGAACGAAAGACCGAAGCTGTCTAATTCTATGTTCTTGAAGTTGTTATCCTTTGCAACGGAGTAAATCATGGAGAGGGCAGTGGGCAAGCGAGTATTCGATTTAATCGACTCCTTCGCATGGTAGGTCCCAGATGCATCATCCACCACGTAGCACCGCCACCACCTCCCTTGGGGAAGCCCACCCACTTCATTTCCCCCCAGCGCATTCCCACCACGGCTTCCCCTAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 CTTCTTCTCTGTCCTACGAAGCGATTTTTACAAAGCGAATTTTTACCAAGCGAACAAAGA 60
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 AGAAAGAAAAGCAAAGATGGCTAAAGCACCTGCAGTTGGTATTGATCTTGGCACTACTTA 120
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 TTCCTGTGTTGGTGTATTCCAGCATGGAAAAGTAGAAATCATCGCTAATGATCAAGGAAA 180
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 TCGTACAACACCTAGCTATGTTGCATTTACGGAAACTGAACGATTAATCGGCGATGCTGC 240
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 CAAGAACCAAGTTGCCATGAACCCCAACAACACCATTTTCGATGCCAAACGTCTTATTGG 300
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 TCGTCGTTTTGAAGATCCCACTGTTCAGGCTGATATGAAGCATTGGCCCTTTACTGTTGT 360
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 AAATGATGGTGGCAAGCCTAAAATTCAAGTATATTACAAAGGAGAGGCGAAGACTTTCTT 420
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 CCCCGAAGAAGTGAGTTCAATGGTCCTGGTAAAGATGAAGGAAACAGCTGAAGCATATCT 480
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 GGGAAAAACTGTCAGTAATGCCGTGATCACTGTACCTGCTTACTTCAACGACTCGCAGCG 540
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 TCAGGCAACTAAGGACGCTGGTACCATCTCGGGCTTAAATGTTTTACGTATTATTAATGA 600
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 GCCCACCGCTGCTGCCATTGCTTATGGCTTGGATAAAAAAACTACCAGCGAACGCAACGT 660
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 CCTTATCTTTGATCTTGGTGGTGGCACCTTTGATGTCTCAATTCTGACCATTGAAGATGG 720
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 CATTTTCGAGGTCAAGTCAACAGCAGGAGATACCCATCTTGGCGGCGAAGATTTTGATAA 780
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 CCGTATGGGTAATCACTTTGTACAAGAATTCAAACGGAAATATAAAAAAGATTTAACTGC 840
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 AAATAAACGCGCTCTTCGTCGTTTGAGAACAGCTTGTGAGCGTGCGAAACGCACTCTGTC 900
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 TTCGTCTACTCAAGCTAGCATTGAAATTGATTCGCTCTATGAGGGAATCGATTTTTATAC 960
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 ATCGATCACCAGAGCTCGATTTGAAGAACTCTGTGCTGATCTCTTCAGAGGAACACTCGA 1020
consensus_8#1 ------------------------------------------------------------
consensus_8#2 ------------------------------------------------------------
consensus_8#0 GCCAGTAGAAAAATCATTACGCGATGCTAAAATGGATAAAGCTCAGATTCACGATATCGT 1080
consensus_8#1 --------------------------ATCAGCGCCAGTGACAAACAAGTTGTACTGGATA 34
consensus_8#2 ------------------------------------------------------------
consensus_8#0 TCTGGTTGGTGGATCCACGCGAATTCCTAAGATTCAAAAACTTCTGCAAAGACTTCTTCA 1140
consensus_8#1 AATGCAACGATATCATTAAATGGCTCGATGCTAACCAATTAGCTGATAAAGAAG--AATA 92
consensus_8#2 ------------------------------------------------------------
consensus_8#0 ATGGAAAGGAATTGAATAAATCTATCAATCCTGATGAGGCTGTGGCATATGGAGCTGCTG 1200
consensus_8#1 CGAACATAAACAGAAAGAATTAGAAGCTATATGCAATCCTATTGTCACAAAATTGTATCA 152
consensus_8#2 ------------------------------------------------------------
consensus_8#0 TGCAAGCTGCCATTCTTCATGGTGATAAATCTGAAGAAGTACAAGATCTATTACTTCTTG 1260
consensus_8#1 GGGCACTGGTGGGAT-GCCTGGTGGAATGCCTGGTGGAATGCCT--GGTGGCTTCCCAGG 209
consensus_8#2 ---CAGTTTTTTGA--ACATAGAAAACCAACAACTGATCTTTTTTAGGCACATTTTCAAA 55
consensus_8#0 ATGTAACACCTCTATCTCTTGGTATTGAAACTGCTGGTGGTGTTATGACTGCTCTTATTA 1320
* * * * * * ** * * *
consensus_8#1 AGCTGGTGGCGGTGCTCCTGGTGGTGGTGCATCTGGACCTACCATCGAAGAAGTCGATTA 269
consensus_8#2 ATAAAAGTACAATAGTTTTTTTTTACGTTTATTATAATCTGTAG--GAAATTACTAATGA 113
consensus_8#0 AGAGAAATACTACCATTCCAACAAA-GCAAACTCAAACCT-TCACTACATATGCTGAT-- 1376
* * * * * * ** * **
consensus_8#1 AATCGATTACTCGCTTGCCCACTGCCCTCTCCATGATTTAC-TCCGTTGCAAAGGATAAC 328
consensus_8#2 AATAAATTATTTGTCTAGTT-TTACAGTACCAACAAAATAAATAAATCACAAGTGATTTT 172
consensus_8#0 AATCAACCAGGTGTATTGATTCAAGTCTATGAAGGAGAACGTGCTATGACGAAAGATAAC 1436
*** * * * * * * * * * * ***
consensus_8#1 AA-CTTCAAGA-ACATA-GAATTAGACAGCTTCGGTCTTTCGTTCCTAAATATATAATTT 385
consensus_8#2 TA-CAATGATATAAAAA-AAATTATAAAACCTACATCAATTATATATTTAGGAACGAAAG 230
consensus_8#0 AATCTGTTAGGTAAATTTGAGCTCAGCGGCATTCCTCCAGCTCCTCGAGGAGTTCCTCAA 1496
* * * * * * * * * **
consensus_8#1 ATCTAGGTTTTATAATTTTTTTTATATCATTGTAAAAATCACTTCTGATTTATTTATTTT 445
consensus_8#2 ACCGAAGCTGTCTAATTCTATGT-TCTTGAAGTTGTTATCCTTTGCAACGGAGTAAATCA 289
consensus_8#0 ATTGAAGTCACCTT-TGATATCGATGCCAATGGTATTCTCAATGTCTCTGCAGTTGATAA 1555
* * * * * * * * * ** * * * *
consensus_8#1 GTTCTACTGTAAAACTAGACAAATAATTTATTTCATTAGTAA---TTTCCTACAGATTAT 502
consensus_8#2 TGGAGAGGGCAG---TGGGCAAGCGAGTATTCGATTTAATCG---ACTCCTTCGCATGGT 343
consensus_8#0 ATCTACTGGTAAAGAGAACAAAATCACTATTACCAACGATAAAGGTCGTCTCAGCAAAGA 1615
* * ** * * * * ** *
consensus_8#1 AATAAACGTAAAAAAAAACTATTGTACTTA--TATTTTG------AAAATNNGGATAAAA 554
consensus_8#2 AGGTCCCAGATGCATCATCCACCACGTAGC--ACCGCCA------CCACCTCCCTTGGGG 395
consensus_8#0 AGATATCGAAAGGATGGTCAACGAAGCTGAGAAATATCGTAGCGAAGACGAAAAACAAAA 1675
* * * * * * *
consensus_8#1 AAGATCAGTTGTTGGTTTTCTATGTTCAAAAAACTGAAAATATAAAACAATCCCTGAAAT 614
consensus_8#2 AAGCCCACCCACT--TCATTTCCCCCCAGCGCATTCCCACCACG--GCTTCCCCTAC--- 448
consensus_8#0 AGAAACTATCGCTGCTAAGAATGGTCTTGAGTCTTACTGCTTCAACATGAAGAGTACAGT 1735
* * * * * *
consensus_8#1 ACAAAA------------------------------------------------------ 620
consensus_8#2 ------------------------------------------------------------
consensus_8#0 GGAAGANNAGAAGTTGAAGGATAAAATCAGCGCCAGTGACAAACAAGTTGTACTGGATAA 1795
consensus_8#1 ----------------
consensus_8#2 ----------------
consensus_8#0 ATGCAACGATATCATT 1811
|
|||||||
| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |