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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_838#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 666 fasta sequence
[AACGTTTGGGATTCCATGAAGGCTGAACGAGCCGGAATTCTTGCCGGTCACGATAATCGTGTGTCTTGCCTGGGCGTTACGGAGGATGGTATGGCAGTAGGGACGGGCTCATGGGACTCATTTTTGCGTATTTGGAACTAACTTGGGGTTAATCCCAAGACGTTCCTCCACAGAACCAACTACAGCCAATCAGCATACAGTATAAGCATCAAGTACCACCACTTGGCCACCGAAGTCGGCGTGTCCGTGTCCTCAACGGAGGCGAATTACTCGCCCGGTTCACCGGAGTTGACGTTGATCAGAAAGTTTGGACATCCGTTAGACAACAACAGTAAAAAGACCCACGGTAGTAGCGGCGGTAGCGGCAGCGAATTTAAGAACGTTTTGGGTTGTGGTGGTAAAAAGGACTATCGGAAACGCGTCGTCGATTTAACCTNNCGACGTGGCAAAGTCGGCGATAAAATCACTCATGAATATCAGCGCTTCTAGTATATGGATATACCGTCTGTTCGATATATTCGAACGTACGACTGATGATGATGATGATCGAGAAAGAAGCGTGGTGAAAGGAAGAACGACAGAACGGGGAGCAGCACCAAGGCTGACGGCCATATCTCTCCGATGTCGTGCGCGTTACTTCCTTTCTCTCCTCCCCTTTCTCAAGGA]
[+] EMBL BI516722 [AACGTTTGGGATTCCATGAAGGCTGAACGAGCCGGAATTCTTGCCGGTCACGATAATCGTGTGTCTTGCCTGGGCGTTACGGAGGATGGTATGGCAGTAGGGACGGGCTCATGGGACTCATTTTTGCGTATTTGGAACTAACTTGGGGTTAATCCCAAGACGTTCCTCCACAGAACCAACTACAGCCAATCAGCATACAGTATAAGCATCAAGTACCACCACTTGGCCACCGAAGTCGGCGTGTCCGTGTCCTCAACGGAGGCGAATTACTCGCCCGGTTCACCGGAGTTGACGTTGATCAGAAAGTTTGGACATCCGTTAGACAACAACAGTAAAAAGACCCACGGTAGTAGCGGCGGTAGCGGCAGCGAATTTAAGAACGTTTTGGGTTGTGGTGGTAAAAAGGACTATCGGAAACGCGTCGTCGATTTAACCTNNCGACGTGGCAAAGTCGGCGATAAAATCACTCATGAATATCAGCGCTTCTAGTA ]
[+] EMBL BI513440 [ AACGGAGGCGAATTACTCGCCCGGTTCACCGGAGTTGACGTTGATCAGAAAGTTTGGACATCCGTTAGACAACAACAGTAAAAAGACCCACGGTAGTAGCGGCGGTAGCGGCAGCGAATTTAAGAACGTTTTGGGTTGTGGTGGTAAAAAGGACTATCGGAAACGCGTCGTCGATTTAACCTGGCGACGTGGCAAAGTCGGCGATAAAATCACTCATGAATATCAGCGCTTCTAGTATATGGATATACCGTCTGTTCGATATATTCGAACGTACGACTGATGATGATGATGATCGAGAAAGAAGCGTGGTGAAAGGAAGAACGACAGAACGGGGAGCAGCACCAAGGCTGACGGCCATATCTCTCCGATGTCGTGCGCGTTACTTCCTTTCTCTCCTCCCCTTTCTCAAGGA]
consensusID : consensus_838#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 476 fasta sequence
[ATTTTTGCGTATTTGGAACTAACTTGGGGTTAATCCCAAGACGTTCCTCCACAGAACCAACTACAGCCAATCAGCATACAGTATAAGCATCAAGTACCACCACTTGGCCACCGAAGTCGGCGTGTCCGTGTCCTCAACGGAGGCGAATTACTCGCCCGGTTCACCGGAGTTGACGTTGATCAGAAAGTTTGGACATCCGTTAGACAACAACAGTAAAAAGACCCAGGGTAGTAGCGGCGGTAGCGGCAGCGAATTTAAGAACGTTTTGGGTTGTGGTGGTAAAAAGGACTATCGGAAACGCGTCGTCGATTTAACCTGGCGACGTGGCAAAGTCGGCGATAAAATCACTCATGAATATCAGCGCTTCTAGTATATGGATATACCGTCTGTTCGATATATTCGAACGTACGACTGATGATGATGATGATGATGATGATGATCGAGAAAGAAGCGTGGTGAAAGGAAGAACGACAGAA]
[+] EMBL BI509975 [ATTTTTGCGTATTTGGAACTAACTTGGGGTTAATCCCAAGACGTTCCTCCACAGAACCAACTACAGCCAATCAGCATACAGTATAAGCATCAAGTACCACCACTTGGCCACCGAAGTCGGCGTGTCCGTGTCCTCAACGGAGGCGAATTACTCGCCCGGTTCACCGGAGTTGACGTTGATCAGAAAGTTTGGACATCCGTTAGACAACAACAGTAAAAAGACCCAGGGTAGTAGCGGCGGTAGCGGCAGCGAATTTAAGAACGTTTTGGGTTGTGGTGGTAAAAAGGACTATCGGAAACGCGTCGTCGATTTAACCTGGCGACGTGGCAAAGTCGGCGATAAAATCACTCATGAATATCAGCGCTTCTAGTATATGGATATACCGTCTGTTCGATATATTCGAACGTACGACTGATGATGATGATGATGATGATGATGATCGAGAAAGAAGCGTGGTGAAAGGAAGAACGACAGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_838#0 AACGTTTGGGATTCCATGAAGGCTGAACGAGCCGGAATTCTTGCCGGTCACGATAATCGT 60
consensus_838#1 ------------------------------------------------------------
consensus_838#0 GTGTCTTGCCTGGGCGTTACGGAGGATGGTATGGCAGTAGGGACGGGCTCATGGGACTCA 120
consensus_838#1 -----------------------------------------------------------A 1
*
consensus_838#0 TTTTTGCGTATTTGGAACTAACTTGGGGTTAATCCCAAGACGTTCCTCCACAGAACCAAC 180
consensus_838#1 TTTTTGCGTATTTGGAACTAACTTGGGGTTAATCCCAAGACGTTCCTCCACAGAACCAAC 61
************************************************************
consensus_838#0 TACAGCCAATCAGCATACAGTATAAGCATCAAGTACCACCACTTGGCCACCGAAGTCGGC 240
consensus_838#1 TACAGCCAATCAGCATACAGTATAAGCATCAAGTACCACCACTTGGCCACCGAAGTCGGC 121
************************************************************
consensus_838#0 GTGTCCGTGTCCTCAACGGAGGCGAATTACTCGCCCGGTTCACCGGAGTTGACGTTGATC 300
consensus_838#1 GTGTCCGTGTCCTCAACGGAGGCGAATTACTCGCCCGGTTCACCGGAGTTGACGTTGATC 181
************************************************************
consensus_838#0 AGAAAGTTTGGACATCCGTTAGACAACAACAGTAAAAAGACCCACGGTAGTAGCGGCGGT 360
consensus_838#1 AGAAAGTTTGGACATCCGTTAGACAACAACAGTAAAAAGACCCAGGGTAGTAGCGGCGGT 241
******************************************** ***************
consensus_838#0 AGCGGCAGCGAATTTAAGAACGTTTTGGGTTGTGGTGGTAAAAAGGACTATCGGAAACGC 420
consensus_838#1 AGCGGCAGCGAATTTAAGAACGTTTTGGGTTGTGGTGGTAAAAAGGACTATCGGAAACGC 301
************************************************************
consensus_838#0 GTCGTCGATTTAACCTNNCGACGTGGCAAAGTCGGCGATAAAATCACTCATGAATATCAG 480
consensus_838#1 GTCGTCGATTTAACCTGGCGACGTGGCAAAGTCGGCGATAAAATCACTCATGAATATCAG 361
**************** ******************************************
consensus_838#0 CGCTTCTAGTATATGGATATACCGTCTGTTCGATATATTCGAACGTACGACTGATGATGA 540
consensus_838#1 CGCTTCTAGTATATGGATATACCGTCTGTTCGATATATTCGAACGTACGACTGATGATGA 421
************************************************************
consensus_838#0 TGATGAT------------CGAGAAAGAAGCGTGGTGAAAGGAAGAACGACAGAACGGGG 588
consensus_838#1 TGATGATGATGATGATGATCGAGAAAGAAGCGTGGTGAAAGGAAGAACGACAGAA----- 476
******* ************************************
consensus_838#0 AGCAGCACCAAGGCTGACGGCCATATCTCTCCGATGTCGTGCGCGTTACTTCCTTTCTCT 648
consensus_838#1 ------------------------------------------------------------
consensus_838#0 CCTCCCCTTTCTCAAGGA 666
consensus_838#1 ------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |