These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_853#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 644 fasta sequence [TCATTTACAATAAAAGAACACAAAATCAAAAAAGATGATGACTTTACAATAAATTCTTCATATAACGCGCGCAATAATATGAAAATATGGCGGCTATCGAAATATCTTCAAAATATCGATTCTCGACCTAACCTCACTTCAGTCTCCGCTAGGTGCGCACAGAGTTAGTGTCGCTTTGTAGTGGAAAAGGAAACGAAGTAACTGTAAATAGAACGATACCATAAGAGTTGACTGTTTAATCGACAAGCGCGCACGCGCCGCTTTCCCCTCGCTCTCACAATATACTCCGCGCGTAACCGCCGCCATAGTTGATATTTCTCCGATAGAATATTAATAGCAGCGTAAGTTTTCGCGNGTAAACATATTTTTATTTACTAACTGGAAAACAAGAAAGCGTTCGACGAGGGCGGTGAGACGAGGTCATTCAAGATAAAGCTGGGATCCGTAAGAAGAAGGAGGGTGTCTACTTTCACAGCTCGTGGTTTTCAGGAGAGTGGCCTGGCATCGCGGCGCTTCGAGTTAACGTGTGGCCGTCGGGTGGCTATGTACCGTTAGCTCGAATTCATTCCCCGTTGGCCGGCCCAAGACCCACGCTTACCTACCGACTGGGGCCATACTCGATCGAACTCGACTGTTGTAAACCC] [-] EMBL BI506225 [TCATTTACAATAAAAGAACACAAAATCAAAAAAGATGATGACTTTACAATAAATTCTTCATATAACGCGCGCAATAATATGAAAATATGGCGGCTATCGAAATATCTTCAAAATATCGATTCTCGACCTAACCTCACTTCAGTCTCCGCTAGGTGCGCACAGAGTTAGTGTCGCTTTGTAGTGGTAAAGGAAACGAAGTAACTGTAAATAGAACGATACCATAAGAGTTGACTGTTTAATCGACAAGCGCGCACGCGCCGCTTTCCCCTCGCTCTCACAATATACTCCGCGCGTAACCGCCGCCATAGTTGATATTTCTCCGATAGAATATTAATAGCAGCGTAAGTTTTCGCGGTTAAACATATTTTTATTTACTAACTGGAAAACAAGAATGCGTTCGACGAGGGCGGTGAGACGAGGTCATTCAAGATAAAGCTGGGATCCGTAAGAAGAAGGAGGGTGTCTACTTTCACAGCTCGTGGTTTTCAGGAGAGTGGCCTGGCATCGCGGCGCTTCGAGTTAACGTGTGGCCGTCGGGTGGCTATGTACCGTTAGCTCGAATTCATTCCCCGTTGGCCGGCCCAAGACCCACGCTTACCTACCGACTGGGGCCATACTCGATCGAACTCGACTGTTGTAAACCC] [+] EMBL BI503607 [ tAAAAATAATTATAATACCTGTAAATAGAACGATACCATAAGAGTTGACTGTTTAATCGACAAGCGCGCACGCGCCGCTTTCCCCTCGCTCTCACAATATACTCCGCGCGTAACCGCCGCCATAGTTGATATTTCTCCGATAGAATATTAATAGCAGCGTAAGTTTTCGCGNGTAAACATATTTTTATTTACTAACTGGAAAACAAAAAAa ] consensusID : consensus_853#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 307 fasta sequence [ATTATACAACATTATAAATATATATATTCATTTACAATAAAAGAACACAAAATCAAAAAAGATGATGACTTTACAATAAATTCTTCATATAACGCGCGCAATAATATGAAAATATGGCGGCTATCGAAATATCTTCAAAATATCGATTCTCGACCTAACCTCACTTCAGTCTCCGCTAGGTGCGCACAGAGTTAGTGTCGCTTTGTAGTGGTAAAGGAAACGAAGTAACTGAGAGTAAAACAGAACAACGGACAGGTGTTTTTTTGCACTGTAGTAAATTTTTTTCGAAAATTCGCGATTCTTATAA] [-] EMBL BI511992 [ATTATACAACATTATAAATATATATATTCATTTACAATAAAAGAACACAAAATCAAAAAAGATGATGACTTTACAATAAATTCTTCATATAACGCGCGCAATAATATGAAAATATGGCGGCTATCGAAATATCTTCAAAATATCGATTCTCGACCTAACCTCACTTCAGTCTCCGCTAGGTGCGCACAGAGTTAGTGTCGCTTTGTAGTGGTAAAGGAAACGAAGTAACTGAGAGTAAAACAGAACAACGGACAGGTGTTTTTTTGCACTGTAGTAAATTTTTTTCGAAAATTCGCGATTCTTATAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_853#0 ---------------------------TCATTTACAATAAAAGAACACAAAATCAAAAAA 33 consensus_853#1 ATTATACAACATTATAAATATATATATTCATTTACAATAAAAGAACACAAAATCAAAAAA 60 ********************************* consensus_853#0 GATGATGACTTTACAATAAATTCTTCATATAACGCGCGCAATAATATGAAAATATGGCGG 93 consensus_853#1 GATGATGACTTTACAATAAATTCTTCATATAACGCGCGCAATAATATGAAAATATGGCGG 120 ************************************************************ consensus_853#0 CTATCGAAATATCTTCAAAATATCGATTCTCGACCTAACCTCACTTCAGTCTCCGCTAGG 153 consensus_853#1 CTATCGAAATATCTTCAAAATATCGATTCTCGACCTAACCTCACTTCAGTCTCCGCTAGG 180 ************************************************************ consensus_853#0 TGCGCACAGAGTTAGTGTCGCTTTGTAGTGGAAAAGGAAACGAAGTAACTGTAAATAGAA 213 consensus_853#1 TGCGCACAGAGTTAGTGTCGCTTTGTAGTGGTAAAGGAAACGAAGTAACTGAGAGTAAAA 240 ******************************* ******************* * ** ** consensus_853#0 CGATACCATAAG-AGTTGACTGTTTAATCGACAAGCGCGCACGCGCCGCTTTCCCCTCGC 272 consensus_853#1 CAGAACAACGGACAGGTGTTTTTTTGCACTGTA-GTAAATTTTTTTCGAAAATTCGCGAT 299 * ** * ** ** * *** * * * ** * consensus_853#0 TCTCACAATATACTCCGCGCGTAACCGCCGCCATAGTTGATATTTCTCCGATAGAATATT 332 consensus_853#1 TCTTATAA---------------------------------------------------- 307 *** * ** consensus_853#0 AATAGCAGCGTAAGTTTTCGCGNGTAAACATATTTTTATTTACTAACTGGAAAACAAGAA 392 consensus_853#1 ------------------------------------------------------------ consensus_853#0 AGCGTTCGACGAGGGCGGTGAGACGAGGTCATTCAAGATAAAGCTGGGATCCGTAAGAAG 452 consensus_853#1 ------------------------------------------------------------ consensus_853#0 AAGGAGGGTGTCTACTTTCACAGCTCGTGGTTTTCAGGAGAGTGGCCTGGCATCGCGGCG 512 consensus_853#1 ------------------------------------------------------------ consensus_853#0 CTTCGAGTTAACGTGTGGCCGTCGGGTGGCTATGTACCGTTAGCTCGAATTCATTCCCCG 572 consensus_853#1 ------------------------------------------------------------ consensus_853#0 TTGGCCGGCCCAAGACCCACGCTTACCTACCGACTGGGGCCATACTCGATCGAACTCGAC 632 consensus_853#1 ------------------------------------------------------------ consensus_853#0 TGTTGTAAACCC 644 consensus_853#1 ------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |