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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_875#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1155 fasta sequence
[AGAAGAAAAATACATGAAGTCACAACCTGCTGAAGTAATGCCTTTAGAAAGTTCTTTATCTGAGTTACGCGATCCTACACAATATGTTGGTCTAAAGAATTTAGGTGCAACCTGTTATGTTAATAGCTTAATTCAAATGTGGTTTCATAATGAAGATATGAGGAGAATAATATACAAGTGGAATATCACAGATGATCCAGAGGAAAAGGAAGCACTATATCAAGCTAAGAAGGCAGGAGTACCATTTCATCCAGTGACAGCAGTTGGACAGTTGCAATATATATTTGCAATGATGCAATTTGGAAATCGTCGTCTACTCGATCCAATGAACCTTGCAATCGCGTTGTCATTGGATACTNGAACTCAGCAGGATGCACAGGAATTCTCCAAGCTGCTTCTCTGCCATATCGAAGGGAAACTTCAACAAAACTCAGAACTGAAGCAGATGCTGCAGAGGCTGACCCAAGGAAAATACAGCTATATCAATTGGTGGGTTTTCTGAAGTGGAAAACAAATGAGAATTGTCCTAAACGATGATGATGCTGATGATCTTGACGATGAGAACATGTTGCTCGAAATGCGGAACTGAATATCCAACGTCCACAACGTTCTACGAATTGGATCTACAACTTGCAGCCACTTTGAAAGAGGCAATAGAGAAATACTTGTCTGTGGAACAGTTGACTGGAGCAAATCAGTATCACTGCGTTACCTGCAATGACAAAAAAGATGCGCGCCGTTTTATACGCTTGGAATCTCTTCCAGAAACATTAAATATACAGTTAATGCGTTTTGTGTTTCATAGAGATTCTGGGCAGAAAAGAAAGTTGAATTCTTTTATACAATTTCCCGAAGATCTTGATATGTCAGAATATGTGAGGTGTCCATTACAAACTCATTTGTACAGTCTTGTAGCAGTTTTGAGTCATAAAGGACCATCTGCACATTCGGGTCATTATATTGCAAATATATGCAATTCAAATGGGGAATGGTATCAATTTAGTGATGATAAAGTAGAAAAAATGCAGAATAAAAGAATCGAGGATGGAGTTAATGAGAATTCAAAGATTATAAAACGAGGTCGTATACCGAAAGGATTTTTATCTTCTAACACTGCATATCATGTTAGTTTATAAAAAAGTTACTTCTGAAAAA]
[+] EMBL BI508978 [AGAAGAAAAATACATGAAGTCACAACCTGCTGAAGTAATGCCTTTAGAAAGTTCTTTATCTGAGTTACGCGATCCTACACAATATGTTGGTCTAAAGAATTTAGGTGCAACCTGTTATGTTAATAGCTTAATTCAAATGTGGTTTCATAATGAAGATATGAGGAGAATAATATACAAGTGGAATATCACAGATGATCCAGAGGAAAAGGAAGCACTATATCAAGCTAAGAAGGCAGGAGTACCATTTCATCCAGTGACAGCAGTTGGACAGTTGCAATATATATTTGCAATGATGCAATTTGGAAATCGTCGTCTACTCGATCCAATGAACCTTGCAATCGCGTTGTCATTGGATACTNGAACTCAGCAGGATGCACAGGAATTCTCCAAGCTGCTTCTCTGCCATATCGAAGGGAAACTTCAACAAAACTCAGAACTGAAGCAGATGCTGCAGAGGCTGACCCAAGGAAAATACAGCTATATCAATTGGTGGGTTTTCTGAAGTGGAAAACAAATGAGAATTGTCCTAAACGATGATGATGCTGATGATCTTGACGATGAGAACATGTTGCTCGAAATGCGGAA ]
[-] EMBL BQ103762 [ TCCAATGAACCTTGCAATCGTGTTGTCATTGGATACTAGAACTCAGCAGGATGCACAGGAATTCTCCAAGCTGCTTCTCTGCCATATCGAAGGGAAACTTCAACAAAACTCAGAACTGAAGCAGATGCTGCAGAGGCTGACCCAAGGAAAATACAGCTATATCAATTGGTGGGTTTTCTGAAGTGGAAAACAAATGAGAATTGTCCTAAACGATGATGATGCTGATGATCTTGACGATGAGAACATGTTGCTCGAAATGCGGAACTGAATATCCAACGTCCACAACGTTCTACGAATTGGATCTACAACTTGCAGCCACTTTGAAAGAGGCAATAGAGAAATACTTGTCTGTGGAACAGTTGACTGGAGCAAATCAGTATCACTGCGTTACCTGCAATGACAAAAAAGATGCGCGCCGTTTTATACGCTTGGAATCTCTTCCAGAAACATTAAATATACAGTTAATGCGTTTTGTGTTTCATAGAGATTCTGGGCAGAAAAGAAAGTTGAATTCTTTTATACAATTTCCCGAAGATCTTGATATGTCAGAATATGTGAGGTGTCCATTACAAACTCATTTGTACAGTCTTGTAGCAGTTTTGAGTCATAAAGGACCATCTGCACATTCGGGTCATTATATTGCAAATATATGCAATTCAAATGGGGAATGGTATCAATTTAGTGATGATAAAGTAGAAAAAATGCAGAATAAAAGAATCGAGGATGGAGTTAATGAGAATTCAAAGATTATAAAACGAGGTCGTATACCGAAAGGATTTTTATCTTCTAACACTGCATATCATGTTAGTTTATAAAAAAGTTACTTCTGAAAAA]
consensusID : consensus_875#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 581 fasta sequence
[TTTTACATTCAGATAATGTTGTAAAAGAAAAACAGTACTTTACAATATTCACAGCGGCATCTTTCATAACCTCAACAATCAGGAACATACAGTACTTCTATGTAAAAATGCCACCAACAAAAAAGACTGATTTAGACAAATTAGCATGGGCTTGGGTGGAAGGTGTGGTTTTAGACCAAATAGAAAGGATACATTTGGAAACTGCTTATAGAATAGGTTTAAAAGCATGTAAAAATTGCAAAATTTAGGTGCAACCTGTTATGTTAATAGCTTAATTCAAATGTGGTTTCATAATGAAGATATGAGGAGAATAATATACAAGTGGAATATCACAGATGATCCAGAGGAAAAGGAAGCACTATATCAAGCTAAGAAGGCAGGAGTACCATTTCATCCAGTGACAGCAGTTGGACAGTTGCAATATATATTTGCAATGATGCAATTTGGAAATCGTCGTCTACTCGATCCAATGAACCTTGCAATCGCGTTGTCATTGGATACTAGAACTCAGCAGGATGCACAGGAATTCTCCAAGCTGCTTCTCTGCCATATCGAAGGGAAACTTCAACAAAACTCAGAAC]
[+] EMBL BI503508 [TTTTACATTCAGATAATGTTGTAAAAGAAAAACAGTACTTTACAATATTCACAGCGGCATCTTTCATAACCTCAACAATCAGGAACATACAGTACTTCTATGTAAAAATGCCACCAACAAAAAAGACTGATTTAGACAAATTAGCATGGGCTTGGGTGGAAGGTGTGGTTTTAGACCAAATAGAAAGGATACATTTGGAAACTGCTTATAGAATAGGTTTAAAAGCATGTAAAAATTGCAAAATTTAGGTGCAACCTGTTATGTTAATAGCTTAATTCAAATGTGGTTTCATAATGAAGATATGAGGAGAATAATATACAAGTGGAATATCACAGATGATCCAGAGGAAAAGGAAGCACTATATCAAGCTAAGAAGGCAGGAGTACCATTTCATCCAGTGACAGCAGTTGGACAGTTGCAATATATATTTGCAATGATGCAATTTGGAAATCGTCGTCTACTCGATCCAATGAACCTTGCAATCGCGTTGTCATTGGATACTAGAACTCAGCAGGATGCACAGGAATTCTCCAAGCTGCTTCTCTGCCATATCGAAGGGAAACTTCAACAAAACTCAGAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_875#0 ------------------------------------------------------------
consensus_875#1 TTTTACATTCAGATAATGTTGTAAAAGAAAAACAGTACTTTACAATATTCACAGCGGCAT 60
consensus_875#0 ------------------------------------------------------------
consensus_875#1 CTTTCATAACCTCAACAATCAGGAACATACAGTACTTCTATGTAAAAATGCCACCAACAA 120
consensus_875#0 -------------------------------AGAAGAAAAATACATGAAGTCACAACCTG 29
consensus_875#1 AAAAGACTGATTTAGACAAATTAGCATGGGCTTGGGTGGAAGGTGTGGTTTTAGACCAAA 180
* ** ** * * * *
consensus_875#0 CTGAAGTAATGCCTTTAGAAAGTTCTTTATCTGAGTTACGCGATCCTACACAATATGTTG 89
consensus_875#1 TAGAAAGGATACATTTGGAAACTGCT---TATAGAATA---GGTTTAAAAGCATGTAAAA 234
*** ** * *** **** * ** * * ** * * * * ** *
consensus_875#0 GTCTAAAGAATTTAGGTGCAACCTGTTATGTTAATAGCTTAATTCAAATGTGGTTTCATA 149
consensus_875#1 AT-TGCAAAATTTAGGTGCAACCTGTTATGTTAATAGCTTAATTCAAATGTGGTTTCATA 293
* * * ****************************************************
consensus_875#0 ATGAAGATATGAGGAGAATAATATACAAGTGGAATATCACAGATGATCCAGAGGAAAAGG 209
consensus_875#1 ATGAAGATATGAGGAGAATAATATACAAGTGGAATATCACAGATGATCCAGAGGAAAAGG 353
************************************************************
consensus_875#0 AAGCACTATATCAAGCTAAGAAGGCAGGAGTACCATTTCATCCAGTGACAGCAGTTGGAC 269
consensus_875#1 AAGCACTATATCAAGCTAAGAAGGCAGGAGTACCATTTCATCCAGTGACAGCAGTTGGAC 413
************************************************************
consensus_875#0 AGTTGCAATATATATTTGCAATGATGCAATTTGGAAATCGTCGTCTACTCGATCCAATGA 329
consensus_875#1 AGTTGCAATATATATTTGCAATGATGCAATTTGGAAATCGTCGTCTACTCGATCCAATGA 473
************************************************************
consensus_875#0 ACCTTGCAATCGCGTTGTCATTGGATACTNGAACTCAGCAGGATGCACAGGAATTCTCCA 389
consensus_875#1 ACCTTGCAATCGCGTTGTCATTGGATACTAGAACTCAGCAGGATGCACAGGAATTCTCCA 533
***************************** ******************************
consensus_875#0 AGCTGCTTCTCTGCCATATCGAAGGGAAACTTCAACAAAACTCAGAACTGAAGCAGATGC 449
consensus_875#1 AGCTGCTTCTCTGCCATATCGAAGGGAAACTTCAACAAAACTCAGAAC------------ 581
************************************************
consensus_875#0 TGCAGAGGCTGACCCAAGGAAAATACAGCTATATCAATTGGTGGGTTTTCTGAAGTGGAA 509
consensus_875#1 ------------------------------------------------------------
consensus_875#0 AACAAATGAGAATTGTCCTAAACGATGATGATGCTGATGATCTTGACGATGAGAACATGT 569
consensus_875#1 ------------------------------------------------------------
consensus_875#0 TGCTCGAAATGCGGAACTGAATATCCAACGTCCACAACGTTCTACGAATTGGATCTACAA 629
consensus_875#1 ------------------------------------------------------------
consensus_875#0 CTTGCAGCCACTTTGAAAGAGGCAATAGAGAAATACTTGTCTGTGGAACAGTTGACTGGA 689
consensus_875#1 ------------------------------------------------------------
consensus_875#0 GCAAATCAGTATCACTGCGTTACCTGCAATGACAAAAAAGATGCGCGCCGTTTTATACGC 749
consensus_875#1 ------------------------------------------------------------
consensus_875#0 TTGGAATCTCTTCCAGAAACATTAAATATACAGTTAATGCGTTTTGTGTTTCATAGAGAT 809
consensus_875#1 ------------------------------------------------------------
consensus_875#0 TCTGGGCAGAAAAGAAAGTTGAATTCTTTTATACAATTTCCCGAAGATCTTGATATGTCA 869
consensus_875#1 ------------------------------------------------------------
consensus_875#0 GAATATGTGAGGTGTCCATTACAAACTCATTTGTACAGTCTTGTAGCAGTTTTGAGTCAT 929
consensus_875#1 ------------------------------------------------------------
consensus_875#0 AAAGGACCATCTGCACATTCGGGTCATTATATTGCAAATATATGCAATTCAAATGGGGAA 989
consensus_875#1 ------------------------------------------------------------
consensus_875#0 TGGTATCAATTTAGTGATGATAAAGTAGAAAAAATGCAGAATAAAAGAATCGAGGATGGA 1049
consensus_875#1 ------------------------------------------------------------
consensus_875#0 GTTAATGAGAATTCAAAGATTATAAAACGAGGTCGTATACCGAAAGGATTTTTATCTTCT 1109
consensus_875#1 ------------------------------------------------------------
consensus_875#0 AACACTGCATATCATGTTAGTTTATAAAAAAGTTACTTCTGAAAAA 1155
consensus_875#1 ----------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |