These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_884#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 508 fasta sequence [CTCTCACGATTCCGTTCTCGCTCTGCCCTCCGTCTCGTTATTCCGTTCGTACAACGCGTCTGAGTGTTGCTTTGCATCGTTACTTCCGGTGAACATCACGCCGGGCCAACGCTCTAGACTGCACCATTCACCAGCGAATCATTATTACGAGATAACCATTCTTCTGGATAATTATCATCGCCAAATAAGGTGAAAGAGATAAAAAAAAAAGAGAAGAGAGAGACAGGGAAAAATACATGCGAAATTGAAAATTGAAAGAGAAGAGGAAAATATATATTGCTCTGCAGGAAGAAAGCAGAAACCTTAACAACGAAGACGATGGAGTGACGGAGCACAAGCCGAACGTCCGATCACCGTTCGCGAATACTTCCTTGAAGGGAGAAGGAGCAGGAGTAAAGCCACGGGTGGCAGAAGAGGAGGAAGGACAGTGGAGGTAGGAGAAAGTGGTAGAACGGAGGTGGTGGTGGTGAGGAAGAGAAGAGTAGAAGAGGAAGAGGGAAGTGAAGCA] [+] EMBL BI513866 [CTCTCACGATTCCGTTCTCGCTCTGCCCTCCGTCTCGTTATTCCGTTCGTACAACGCGTCTGAGTGTTGCTTTGCATCGTTACTTCCGGTGAACATCACGCCGGGCCAACGCTCTAGACTGCACCATTCACCAGCGAATCATTATTACGAGATAACCATTCTTCTGGATAATTATCATCGCCAAATAAGGTGAAAGAGATAAAAAAAAAAGAGAAGAGAGAGACAGGGAAAAATACATGCGAAATTGAAAATTGAAAGAGAAGAGGAAAATATATATTGCTCTGCAGGAAGAAAGCAGAAACCTTAACAACGAAGACGATGGAGTGACGGAGCACAAGCCGAACGTCCGATCACCGTTCGCGAATACTTCCTTGAAGGGAGAAGGAGCAGGAGTAAAGCCACGGGTGGCAGAAGAGGAGGAAGGACAGTGGAGGTAGGAGAAAGTGGTAGAACGGAGGTGGTGGTGGTGAGGAAGAGAAGAGTAGAAGAGGAAGAGGGAAGTGAAGCA] [+] EMBL BI513910 [CTCTCACGATTCCGTTCTCGCTCTGCCCTCCGTCTCGTTATTCCGTTCGTACAACGCGTCTGAGTGTTGCTTTGCATCGTTACTTCCGGTGAACATCACGCCGGGCCAACGCTCTAGACTGCACCATTCACCAGCGAATCATTATTACGAGATAACCATTCTTCTGGATAATTATCATCGCCAAATAAGGTGAAAGAGATAAAAAAAAAAGAGAAGAGAGAGACAGGGAAAAATACATGCGAAATTGAAAATTGAAAGAGAAGAGGAAAATATATATTGCTCTGCAGGAAGAAAGCAGAAACCTTAACAACGAAGACGATGGAGTGACGGAGCACAAGCCGAACGTCCGATCACCGTTCGCGAATACTTCCTTGAAGGGAGAAGGAGCAGGAGTAAA ] consensusID : consensus_884#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 412 fasta sequence [AAGAATTCCGGAGAGACGCGTAGGAAAAAGAGAAAGAGAAAAGGGAGGGGAGAGAGAGAGAAAGAGAGAGAGAGAGAGTGTACTCAGCCGAAAGACACCGGTACATAACGAACGAACGTTGTTTTCTCGTGCTTTTATCTTTACCGTGTATTATCGTCGTGTGTGTCGCGTTTAATCTACGGCCCCTACCGACTAAGGCCGCTGTCTCCGTTCCGGAATACACACGCGTTATCAAATGCACGCACGTACGCACGCGAAAAGATTGCTTCCGGATGCAGTGAATTTCAGCCGGTGAACATCACGCCGGGCCAACGCTCTAGACTGCACCATTCACCAGCGAATCATTATTACGAGATAACCATTCTTCTGGATAATTATCATCGCCAAATAAGGTGAAAGAGATAAAAAAAAA] [+] EMBL BI503490 [AAGAATTCCGGAGAGACGCGTAGGAAAAAGAGAAAGAGAAAAGGGAGGGGAGAGAGAGAGAAAGAGAGAGAGAGAGAGTGTACTCAGCCGAAAGACACCGGTACATAACGAACGAACGTTGTTTTCTCGTGCTTTTATCTTTACCGTGTATTATCGTCGTGTGTGTCGCGTTTAATCTACGGCCCCTACCGACTAAGGCCGCTGTCTCCGTTCCGGAATACACACGCGTTATCAAATGCACGCACGTACGCACGCGAAAAGATTGCTTCCGGATGCAGTGAATTTCAGCCGGTGAACATCACGCCGGGCCAACGCTCTAGACTGCACCATTCACCAGCGAATCATTATTACGAGATAACCATTCTTCTGGATAATTATCATCGCCAAATAAGGTGAAAGAGATAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_884#0 CTCTCACGATTCCGTTCTCGCTCTGCCCTCCGTCTCGTTATTCCGTTCGTACAACGCGTC 60 consensus_884#1 -----------------------------------AAGAATTCCGGAGAGACG-CGTAGG 24 ****** ** ** consensus_884#0 TGAGTGTTGCTTTGCATCGTTACTTCCGGTGAACATCACGCCGGGCCAACGCTCTAGACT 120 consensus_884#1 AAAAAGAGAAAGAGAAAAGGGAGGGGAGAGAGAGAGAAAGAGAGAGAGAGAGAGTGTACT 84 * * * * * * * * * * * * * * *** consensus_884#0 GCACCATTCACCAGCGAATCATTATTACGAGATAACCATTCTTCTGGATAATTATCATCG 180 consensus_884#1 CAGCCGAAAGACACCGGTACATAACGA-ACGAACGTTGTTTTCTCGTGCTTTTATCTTTA 143 ** ** ** *** * * ** ** * * ***** * consensus_884#0 CCAAATAAGGTGAAAGAGATAAAAAAAAAAGAGAAGAGAGAGACAGGGAAAAATACATGC 240 consensus_884#1 CCGTGTA---TTATCGTCGTGTGTGTCGCGTTTAATCTACGGCCCCTACCGACTAAGGCC 200 ** ** * * * * ** * * * * ** * consensus_884#0 GAAATTGAAAATTGAAAGAGAAGAGGAAAATATATATTGCTCTGCAGGAAGAAAGCAGAA 300 consensus_884#1 GCTGTCTCCGTTCCGGAATACACACGCGT-TATCAAATGCACGCACGTACGCACGCGAAA 259 * * * * * * * *** * *** * * * * * ** ** consensus_884#0 ACCTTAACAACGAAGACGATGGAGTGACGGAGCACAAGCCGAACGTCCGATCACCGTTCG 360 consensus_884#1 AGATTGCTTCCGGATGCAGTGAATTT-CAGCCGGTGAACATCACGCCGGGCCAACGCTCT 318 * ** ** * * ** * * * * * * *** * * ** ** ** consensus_884#0 CGAATACTTCCTTGAAGGGAGAAGGAGCAGGAGTAAAGCCACGGGTGGCAGAAGAGGAGG 420 consensus_884#1 AGACTGCACCATTCACCAGCGAATCATTATTA-CGAGATAACCATT--CTTCTGGATAAT 375 ** * * * ** * * *** * * * * ** * * * * consensus_884#0 AAGGACAGTGGAGGTAGGAGAAAGTGGTAGAACGGAGGTGGTGGTGGTGAGGAAGAGAAG 480 consensus_884#1 TATCATCGCCAAATAAGGTGAAAGAGATAAAAAAAAA----------------------- 412 * * * * *** ***** * ** ** * consensus_884#0 AGTAGAAGAGGAAGAGGGAAGTGAAGCA 508 consensus_884#1 ---------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |