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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_896#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 615 fasta sequence
[ATGATTAGCCACAGTCGAAATAGCAGCGATAGCTCCGGTTATCATGAGGCTTCTGTGTTAAGTGATAATCCAGATTCTGCGGGAAGACTTCCAGAAACATTGCCCAGAAGGAACAAAGTTCCTTTGGAAATGTCTCGGAAATTAGCTCAAATGTCACAGTCCAGTAAAAGTCTAAATAATTTGGCTTCTGTACCTGGTACACTTAGTCATGGCATTAGCAATACTTCATTGAGTTCTACAGGATTACGAAAGAAAAGAGTTGCACCTCCTCCGCCAGTAACTAGGCCTTTATCATCGGCGATTTCTATTCAAGCATTAGAACGTATAGTTGACTCTGAAGAATCCTTAACATCAGATATGGATCCTTCTAAACCTCCTTCTGACATTGGTGTTCCATCTAAAGCGAATTCAGATATAGAAGAACGTCCAAAAGCTAATTCAGATATTGGAATAACAACTGTTAGCTCAATATTGTCTTCGAATATTGATTTTATAAAATCTGATACTACAAAAGTGGAATTAGAATCAAAAAGCGGCAAATCTGATCTTGAATCGTGTCATAGATCTGATTCTATAAATGTTAAGTTACCCAGCACGGAGTCAAAACACCCTGCA]
[+] EMBL BI505523 [ATGATTAGCCACAGTCGAAATAGCAGCGATAGCTCCGGTTATCATGAGGCTTCTGTGTTAAGTGATAATCCAGATTCTGCGGGAAGACTTCCAGAAACATTGCCCAGAAGGAACAAAGTTCCTTTGGAAATGTCTCGGAAATTAGCTCAAATGTCACAGTCCAGTAAAAGTCTAAATAATTTGGCTTCTGTACCTGGTACACTTAGTCATGGCATTAGCAATACTTCATTGAGTTCTACAGGATTACGAAAGAAAAGAGTTGCACCTCCTCCGCCAGTAACTAGGCCTTTATCATCGGCGATTTCTATTCAAGCATTAGAACGTATAGTTGACTCTGAAGAATCCTTAACATCAGATATGGATCCTTCTAAACCTCCTTCTGACATTGGTGTTCCATCTAAAGCGAATTCAGATATAGAAGAACGTCCAAAAGCTAATTCAGATATTGGAATAACAACTGTTAGCTCAATATTGTCTTCGAATATTGATTTTATAAAATCTGATACTACAAAAGTGGAATTAGAATCAAAAAGCGGCAAATCTGATCTTGAATCGTGTCATAGATCTGATTCTATAAATGTTAAGTTACCCAGCACGGAGTCAAAACACCCTGCA]
[+] EMBL BI508025 [ TTAGAACGTATAGTTGACTCTGAAGAATCCTTAACATCAGATATGGATCCTTCTAAACCTCCTTCTGACATTGGTGTTCCATCTAAAGCGAATTCAGATATAGAAGAACGTCCAAAAGCTAATTCAGATATTGGAATAACAACTGTTAGCTCAATATTGTCTTCGAATATTGATTTTATAAAA ]
consensusID : consensus_896#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 599 fasta sequence
[TTTTTTTCTATAATGTTTTTTAGATTTTTGTTTTTTGAAGTTTGAATTGCTTCTTCTGTTTTTGTATCTATTAAAGACTCGGATATAGAAGTGATTGCTTCAAAATTATCAAATACTGGAGATGCATTGTCTCTAAAAGCACTTGGAGGAGGTAAAAGTTGATATTCCCACTCAACGATGGATAAATCTTCTTCAAGTGTTGATACATAATCTGATGTATCCTGTTGTGAATTTATAGTTAAATTTGATGCACTGGTATTCATACATATAGTATTTAAATCATTAGGATATTCAGCATTCTTTTTATTTTTCTGTTCTGTTTCTTTAAAAATATCCTTTGACTTTAATTTAATTTTTGCTGGAGCAATTGATATTTCATCGGGTGACGAAACGGAATTGGATAAAGTATCAAATACTTTTTGGAGCAGGACATCAGTCTCTGAGAGATCTGTATCTCTCGTCTGCAGTACTCTAGCGTCTAGAGGAGCATCTTCTATTGGTGCAGGGTGTTTTGACTCCGTGCTGGGTAACTTAACATTTATAGAATCAGATCTATGACACGATTCAAGATCAGATTTGCCGCTTTTTGATTCTAATTC]
[+] EMBL BQ103779 [TTTTTTTCTATAATGTTTTTTAGATTTTTGTTTTTTGAAGTTTGAATTGCTTCTTCTGTTTTTGTATCTATTAAAGACTCGGATATAGAAGTGATTGCTTCAAAATTATCAAATACTGGAGATGCATTGTCTCTAAAAGCACTTGGAGGAGGTAAAAGTTGATATTCCCACTCAACGATGGATAAATCTTCTTCAAGTGTTGATACATAATCTGATGTATCCTGTTGTGAATTTATAGTTAAATTTGATGCACTGGTATTCATACATATAGTATTTAAATCATTAGGATATTCAGCATTCTTTTTATTTTTCTGTTCTGTTTCTTTAAAAATATCCTTTGACTTTAATTTAATTTTTGCTGGAGCAATTGATATTTCATCGGGTGACGAAACGGAATTGGATAAAGTATCAAATACTTTTTGGAGCAGGACATCAGTCTCTGAGAGATCTGTATCTCTCGTCTGCAGTACTCTAGCGTCTAGAGGAGCATCTTCTATTGGTGCAGGGTGTTTTGACTCCGTGCTGGGTAACTTAACATTTATAGAATCAGATCTATGACACGATTCAAGATCAGATTTGCCGCTTTTTGATTCTAATTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_896#0 ---------ATGATTAGCCACAGTCGAAATAGCAGCGATAGCTCCGGTTA-TCATGAGGC 50
consensus_896#1 TTTTTTTCTATAATGTTTTTTAGATTTT-TGTTTTTTGAAGTTTGAATTGCTTCTTCTGT 59
** ** ** * ** * ** * * *
consensus_896#0 TTCTGTGTTAAGTGATAATCCAGATTCTGCGGGAAGACTTCCAGAAACATTGCCCAGAAG 110
consensus_896#1 TTTTGTATCTATTAAAGACTCGGATATAGAAGTGATTGCTTCAAAATTATCAAATACTGG 119
** *** * * * * * * *** * * * * ** ** ** * *
consensus_896#0 GAACAAAGTTCCTTTGGAAATGTCTCGGAAATTAGCTCAAATGTCACAGTCCAGTAAAAG 170
consensus_896#1 AGATGCATTGTCTCTAAAAGCA-CTTGGAGG--AGGTAAAAGTTGATATTCCCACTCAAC 176
* * * ** * ** ** *** ** * *** * * * *** **
consensus_896#0 TCTAAATAATTTGGCTTCTGTACCTGGTACACTTAGTCATGGCATTAGCAATACTTCATT 230
consensus_896#1 GATGGATAAATCTTCTTCAAGTGTTGATACA--TAATC-TGATGT-----ATCCTGTTGT 228
* **** * **** ** **** ** ** ** * ** ** *
consensus_896#0 GAGTTCTACAGGATTACGAAAGAAAAGAGTTGCACCTCCTCCGCCAGTAACTAGGCCTTT 290
consensus_896#1 GAATT-TATAG--TTA-AATTTGATGCACTGGTATTCATACATATAGTATTTAAATCATT 284
** ** ** ** *** * * * * * * * **** ** * **
consensus_896#0 ATCATCGGCGATTTCTATTCAAGCATTAGAACGTATAGTTGACTCTGAAGAATCCTTAAC 350
consensus_896#1 AGGATATTCAGCATTCTTTT---TATTTTTCTGTTCTGTTTCTTTAAAAATATCCTTTGA 341
* ** * * ** *** ** *** * ** ******
consensus_896#0 ATCAGATATGGATCCTTCTAAACCTCCTTCTGACATTGGTGTTCCATCTAAAGCGAATTC 410
consensus_896#1 CTTTAATTTAATTTTTGCTGGAGCA---------ATTGATATTTCATCGGGTGACGAAAC 392
* ** * * * ** * * **** * ** **** * * *
consensus_896#0 AGATATAGAAGAACGTCCAAAAGCTAATTCAGATATTGGAATAACAACTGTTAGCTCAAT 470
consensus_896#1 GGAATTGGATAAAGTATCAAATACTTTTTGGAGCAGGACATCAGTCTCTGAGAGATCTGT 452
** * ** ** **** ** ** * * * *** ** ** *
consensus_896#0 ATT----GTCTTCGAATATTGATTTTATAAA-----ATCTGATACTACAAAAGTGGAATT 521
consensus_896#1 ATCTCTCGTCTGCAGTACTCTAGCGTCTAGAGGAGCATCTTCTATTGGTGCAGGGTGTTT 512
** **** * * * * ** * **** ** * ** * **
consensus_896#0 AGAATCAAAAAGCGGCAAATCTGATCTTGAATCGTGTCATAGATCTGATTCTATA-AATG 580
consensus_896#1 TGACTCCGTGCTGGGTAA--CTTAACATTTATAGAATCAGATCTATGACACGATTCAAGA 570
** ** ** ** ** * * * ** * *** * * *** * ** **
consensus_896#0 TTAAGTTACCCAGCACGGAGTCAAAACACCCTGCA 615
consensus_896#1 TCAGATTTGCCGCTTTTTGATTCTAATTC------ 599
* * ** ** * ** *
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |