These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_927#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 608 fasta sequence [TATTATATATCGCGAGCTGCGAAGTGGTAATTTCCTTAGAGACGAACTCGAAACTGCGGCCCAACGACCCATAATATAATTATCGCTTTTAATCATCGTACCATCTGCCCCCATCGATTGGATTCCGCAATTGTCCGCGTACGTGGCATCGATCGTTTTTAACAAACGTTTCGCGAGTCGATGCACGTGCTTCCTCGCGCGAATGTAAGCGTGATCGCATCTGTGCCATCGTTAGTTAGAGACGCGTTTTCGTTCATGTTCGTCTATACATATATACATATATACATATATATATATATGTATATATATTNNGTGTATATATATATACACACGCGCAAACACAGACACACACACACCTGTACATTTGAGAGAAAGAGAGACTGGAATGGAGGAATGAATATGTGAATGTGTGTGCGAGAGAGAGAGAGAGAGAGAGAGAGAGGGGAGAATGCATTAGGGAGATACGCAAAATACACGCACACCTTATAGCCTTCGTTCTTCCGCACCGATTTGATTTCTTCTTGCGAATCCAATCGCACGTCTCCTTCTTCCCTGCGTATATCGAGTTACGTGTAACTTACATAATAAGTCGGAGTAAAAAAAAAAAC] [+] EMBL BI510631 [TATTATATATCGCGAGCTGCGAAGTGGTAATTTCCTTAGAGACGAACTCGAAACTGCGGCCCAACGACCCATAATATAATTATCGCTTTTAATCATCGTACCATCTGCCCCCATCGATTGGATTCCGCAATTGTCCGCGTACGTGGCATCGATCGTTTTTAACAAACGTTTCGCGAGTCGATGCACGTGCTTCCTCGCGCGAATGTAAGCGTGATCGCATCTGTGCCATCGTTAGTTAGAGACGCGTTTTCGTTCATGTTCGTCTATACATATATACATATATAC ATATATATATGTATATATATTNNGTGTATATATATATACACACGCGCAAACACAGACACACACACACCTGTACATTTGAGAGAAAGAGAGACTGGAATGGAGGAATGAATATGTGAATGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAAAG ] [+] EMBL BI515015 [ CTTAGAGACGAACTCGAAACTGCGGCCCAACGACCCATAATATAATTATCGCTTTTAATCATCGTACCATCTGCCCCCATCGATTGGATTCCGCAATTGTCCGCGTACGTGGCATCGATCGTTTTTAACAAACGTTTCGCGAGTCGATGCACGTGCTTCCTCGCGCGAATGTAAGCGTGATCGCATCTGTGCCATCGTTAGTTAGAGACGCGTTTTCGTTCATGTTCGTCTATACATATATACATATATACATATATATATATATATATATATATTGTGTGTATATATATATACACACGTGCAAACACAGACACACACACACCTGTACATTTGAGAGAAAGAGAGACTGGAATGGAGGAATGAATATGTGAATGTGTGTGCGAGAGAGAGAGAGAGAGAGAGAAAGAGGAGAGAATGCATTAGGGAGATACGCAAAATACACGCACACCTTATAGCCTTCGTTCTTCCGCACCGATTTGATTTCTTCTTGCGAATCCAATCGCACGTCTCCTTCTTCCCTGCGTATATCGAGTTACGTGTAACTTACATAATAAGTCGGAGTAAAAAAAAAAAC] consensusID : consensus_927#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence [CTCCTTCTTCCCTGCGTATATCGAGTTACGTGTAACTTACATAATAAGTCGGAGTAAAAAAAAAAACGTACGTATTTTCTATCCGTTTAATGGCGAAAGAAATTCATCCTTCTTTCGAGAAGAAATCCGAATTTAAAGTGTTCGTTCGATAGGATTTTGATTTTCCTTTTTTTCTCTCTCTTCTAAATTGCTCGAATGTGTAAAAGTGGATCGAACGATTATAGATAAGATCGGGTCGATCAGACGACGCAGGGATACGATACGTAGAAATCCACGAAACTCTAAAGGAGATCGCATTATATTATAACTAGGCATCTAAGGAAGCTACGTGTCTAAGTATGTATGTATCTGTAAGTTGTGNGTTAGCATGTCAAGCGTGGGATATAGTGATGTAATTGAACGAGAAAGAGAAAAGAGAAAAGGCGCTCCGAAAGGGTCGGCGTCTCGTA] [+] EMBL BI513764 [CTCCTTCTTCCCTGCGTATATCGAGTTACGTGTAACTTACATAATAAGTCGGAGTAAAAAAAAAAACGTACGTATTTTCTATCCGTTTAATGGCGAAAGAAATTCATCCTTCTTTCGAGAAGAAATCCGAATTTAAAGTGTTCGTTCGATAGGATTTTGATTTTCCTTTTTTTCTCTCTCTTCTAAATTGCTCGAATGTGTAAAAGTGGATCGAACGATTATAGATAAGATCGGGTCGATCAGACGACGCAGGGATACGATACGTAGAAATCCACGAAACTCTAAAGGAGATCGCATTATATTATAACTAGGCATCTAAGGAAGCTACGTGTCTAAGTATGTATGTATCTGTAAGTTGTGNGTTAGCATGTCAAGCGTGGGATATAGTGATGTAATTGAACGAGAAAGAGAAAAGAGAAAAGGCGCTCCGAAAGGGTCGGCGTCTCGTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_927#0 --TATTATATATCGCGAGCTGCGAAGTGGTAATTTCCTTAGAGACGAACTCGAAACTGCG 58 consensus_927#1 CTCCTTCTTCCCTGCGTA-TATCGAGTTACGTGTAACTTACATAATAAGTCGGAGTAAAA 59 ** * *** * *** * **** * * ** *** * consensus_927#0 GCCCAACGACCCATAATATAATTATCGCTTTTAATCATCGTACCATCTGCCCCCATCGAT 118 consensus_927#1 AAAAAAACGTACGTATTTTCTATCCGTTTAATGGCGAAAGAAATTCATCCTTCTTTCGAG 119 ** * ** * * * * * * * * * * * **** consensus_927#0 TGGATTCCGCAATTGTCCGCGTACGTGGCATCGATCGTTTTTAACAAACGTTTCGCGAGT 178 consensus_927#1 AAGAAATCCGAATTTAAAGTGTTCGT----TCGATAGGATTTTGATTTTCCTTTTTTTCT 175 ** * **** * ** *** ***** * *** ** * consensus_927#0 CGATGCACGTGCTTCCTCGCGCGAATGTAAGCGTGATCGCATCTGTGCCATCGTTAGTTA 238 consensus_927#1 CTCTCTTCTAAATTGCTCGAATGTGTAAAAGTG-GATCGAACGATTATAG--ATAAGATC 232 * * * ** **** * * *** * ***** * * * ** * consensus_927#0 GAGACGCGTTTTCGTTCATGTTCGTCTATACATATATACATATATACATATATATATATA 298 consensus_927#1 GGGTCGATCAGACGACGCAGGGATACGATACGTAGAAATCCACGAAACTCTAAAGGAGAT 292 * * ** ** * * **** ** * * * * * ** * consensus_927#0 TGTATATATATTNNGTGTATATATATATACACACGCGCAAACACAGACACACACACACCT 358 consensus_927#1 CGCAT-TATATTATAACTAGGCATCTAAGGAAGC-TACGTGTCTAAGTATGTATGTATCT 350 * ** ****** ** ** ** * * * * * * * ** consensus_927#0 GTACATTTGAGAGAAAGAGAGACTGGAATGGAGGAATGAATATGTGAATGTGTGTGCGAG 418 consensus_927#1 GTA-AGTTGTGNGTTAGCATGTCAAGCGTGG-GATATAGTGATGTAATTGAACGAGAAAG 408 *** * *** * * ** * * * *** * ** **** * ** * * ** consensus_927#0 AGAGAGAGAGAGAGAGAGAGAGAGGGGAGAATGCATTAGGGAGATACGCAAAATACACGC 478 consensus_927#1 AGA-AAAGAGAAAAGGCGCTCCGAAAGGGTCGGCGTCTCGTA------------------ 449 *** * ***** * * * * * ** * * * consensus_927#0 ACACCTTATAGCCTTCGTTCTTCCGCACCGATTTGATTTCTTCTTGCGAATCCAATCGCA 538 consensus_927#1 ------------------------------------------------------------ consensus_927#0 CGTCTCCTTCTTCCCTGCGTATATCGAGTTACGTGTAACTTACATAATAAGTCGGAGTAA 598 consensus_927#1 ------------------------------------------------------------ consensus_927#0 AAAAAAAAAC 608 consensus_927#1 ---------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |