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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_942#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 588 fasta sequence
[CAAGAAGAAGAAATGGAGGCCGTTCAACGTGCGGAGGTTGGAGGAGTTGGCAACGCCGCCCGCGAGAGAGATGCCTGTGGGTAGGGACCCGTTCAAAGTGCCGATAACCGCTCTTACCTACAAGATTAGCAAACGCCTTCTCAAGATCGCGTTCCCGAAAGTACCGACGGAGATCATGCCGCCTCGTGTCCCCGGTCAGGTCTCTCCGGCCGCGCTCAAGGCCGTAGGTACCTACTTCTCCAATTTTTTTCCTTCGTCTCTCTTTCTCTCTTTCTCTCTTTCCCTCCCCCCTCCTCGCTTCCAACTTGCCACTCAACGCGGACGAAAAATTTTCGACGGGTCTCGTCGCGCGTGTTTACTTAAAACTGGAGTTGGAAAATGGCCAAGTTGGAAAATTCCCTTGTTCGAAAGTTTTCCACGGGATTTAACCTTCGCCTTTGGATGGAGGAGATCGGTTTAATCCTCCTCCTATTCGGCGGGAGCGCGAGACGGCCAAAGTGTAATTAGAACGATGTTTCAGAAGCGATTTACCGACCGAGTCGTTCGCTTTCGNGCGATGGCGGAAAGCGATTGCTGCTCGCAACAAAA]
[+] EMBL BI514746 [CAAGAAGAAGAAATGGAGGCCGTTCAACGTGCGGAGGTTGGAGGAGTTGGCAACGCCGCCCGCGAGAGAGATGCCTGTGGGTAGGGACCCGTTCAAAGTGCCGATAACCGCTCTTACCTACAAGATTAGCAAACGCCTTCTCAAGATCGCGTTCCCGAAAGTACCGACGGAGATCATGCCGCCTCGTGTCCCCGGTCAGGTCTCTCCGGCCGCGCTCAAGGCCGTAGGTACCTACTTCTCCAATTTTTTTCCTTCGTCTCTCTTTCTCTCTTTCTCTCTTTCCCTCCCCCCTCCTCGCTTCCAACTTGCCACTCAACGCGGACGAAAAATTTTCGACGGGTCTCGTCGCGCGTGTTTACTTAAAACTGGAGTTGGAAAATGGCCAAGTTGGAAAATTCCCTTGTTCGAAAGTTTTCCACGGGATTTAACCTTCGCCTTTGGATGGAGGAGATCGGTTTAATCCTCCTCCTATTCGGCGGGAGCGCGAGACGGCCAAAGTGTAATTAGAACGATGTTTCAGAAGCGATTTACCGACCGAGTCGTTCGCTTTCGNGCGATGGCGGAAAGCGATTGCTGCTCGCAACAAAA]
[+] EMBL BI514871 [CAAGAAGAAGAAATGGAGGCCGTTCAACGTGCGGAGGTTGGAGGAGTTGGCAACGCCGCCCGCGAGAGAGATGCCTGTGGGTAGGGACCCGTTCAAAGTGCCGATAACCGCTCTTACCTACAAGATTAGCAAACGCCTTCTCAAGATCGCGTTCCCGAAAGTACCGACGGAGATCATGCCGCCTCGTGTCCCCGGTCAGGTCTCTCCGGCCGCGCTCAAGGCCGTAGGTACCTACTTCTCCAATTTTTTTCCTTCGTCTCTCTTTCTCTCTTTCTCTCTTTCCCTCCCCCCTCCTCGCTTCCAACTTGCCACTCAACGCGGACGAAAAATTTTCGACGGGTCTCGTCGCGCGTGTTTACTTAAAACTGGAGTTGGAAAATGGCCAAGTTGGAAAATTCCCTTGTTCGAAAGTTTTCCACGGGATTTAACCTTCGCCTTTGGATGGAGGAGATCGGTT ]
consensusID : consensus_942#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 567 fasta sequence
[TTCCGAGTGGGGAAACACGGCAAACACGATGAACCGAAAACGGATATTTGCTCGGCAAATAGCGCTTCTTCGAGCTAGTAACTTTTGTTGTTGATTCGACCAGCCACGACCGTACAGTATCCGGCGTTCAGCGTTGAAGGCACGAGCATCGAAAAGAATCAAAGTGATGGCCCAGCCGAAACACGTTACGAAAAAATACGATCCAGCGCAAAGGATATTGGCGAAATTGCGTCGAGCGATCAAACCGGACGAGTGGGAACACCACATGGAGGTGTTGGAGATACTGTCCGCCCCCAAAGTCCCGCCCAAACCTAGACCCATCAAGAAGAAGAAATGGAGGCCGTTCAACGTGCGGAGGTTGGAGGAGTTGGCAACGCCGCCCGCGAGAGAGATGCCTGTGGGTAGGGACCCGTTCAAAGTGCCGATAACCGCTCTTACCTACAAGATTAGCAAACGCCTTCTCAAGATCGCGTTCCCGAAAGTACCGACGGAGATCATGCCGCCTCGTGTCCCCGGTCAGGTCTCTCCGGCCGCGCTCAAGGCCCCTCCCCAAGGACGATAAACCTT]
[+] EMBL BI505638 [TTCCGAGTGGGGAAACACGGCAAACACGATGAACCGAAAACGGATATTTGCTCGGCAAATAGCGCTTCTTCGAGCTAGTAACTTTTGTTGTTGATTCGACCAGCCACGACCGTACAGTATCCGGCGTTCAGCGTTGAAGGCACGAGCATCGAAAAGAATCAAAGTGATGGCCCAGCCGAAACACGTTACGAAAAAATACGATCCAGCGCAAAGGATATTGGCGAAATTGCGTCGAGCGATCAAACCGGACGAGTGGGAACACCACATGGAGGTGTTGGAGATACTGTCCGCCCCCAAAGTCCCGCCCAAACCTAGACCCATCAAGAAGAAGAAATGGAGGCCGTTCAACGTGCGGAGGTTGGAGGAGTTGGCAACGCCGCCCGCGAGAGAGATGCCTGTGGGTAGGGACCCGTTCAAAGTGCCGATAACCGCTCTTACCTACAAGATTAGCAAACGCCTTCTCAAGATCGCGTTCCCGAAAGTACCGACGGAGATCATGCCGCCTCGTGTCCCCGGTCAGGTCTCTCCGGCCGCGCTCAAGGCCCCTCCCCAAGGACGATAAACCTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_942#0 --CAAGAAGAAGAAATGGAGGCCGTTCAACGTGCGGAGGTTGGAGGAGTTGGCAACGCCG 58
consensus_942#1 TTCCGAGTGGGGAAACACGGCAAACACGATGAACCGAAAACGGATA--TTTGC------- 51
* * **** * * * * * ** *** ** **
consensus_942#0 CCCGCGAGAGAGATGCCTGTGGGTAGGGACCCGTTCAAAGTGCCGATAACCGCTCTTACC 118
consensus_942#1 TCGGCAAATAGCGCTTCTTCGAGCTAGTAACTTTTGTTGTTGATTCGACCAGCCACGACC 111
* ** * ** * * * * * ** ** * * ** ***
consensus_942#0 -TACAAGATT-AGCAAACGCCTTCTCAAGATCGCGTTCCCGAAAGTACCGA--CGGAGAT 174
consensus_942#1 GTACAGTATCCGGCGTTCAGCGTTGAAGGCACGAGCATCGAAAAGAATCAAAGTGATGGC 171
**** ** ** * * * * * ** * * **** * * * * *
consensus_942#0 CATGCCGCCTCGTGTCCCCGGTCAGGTCTCTCCGGCCGCGCTCAAGGCCGTAGGTACCTA 234
consensus_942#1 CCAGCCGAAACACGTTACGAAAAAATACGATCCAGC-GCA---AAGGATATTGGCGAAAT 227
* **** * ** * * * *** ** ** **** * **
consensus_942#0 CTTCTCCAATTTTTTTCCTTCGTCTCTCTTTCTCTCTTTCTCTCTTTCCCTCCCCCCTCC 294
consensus_942#1 TGCGTCGAGCGATCAAACCGGACGAGTGGGAACACCACATGGAGGTGTTGGAGATACTGT 287
** * * * * * * **
consensus_942#0 TCGCTTCCAACTTGCCACTCAA-CGCGGACG----AAAAATTTTCGACGGGTCTCGTCGC 349
consensus_942#1 CCGCCCCCAAAGTCCCGCCCAAACCTAGACCCATCAAGAAGAAGAAATGGAGGCCGTTCA 347
*** **** * ** * *** * *** ** ** * ** ***
consensus_942#0 GCGTGTTTACTTAAAACTGGAGTTGGAAA-ATGGCCAAGTTGGAAAATTCCCTTGTTCGA 408
consensus_942#1 ACGTGCGGAGGTTGGA--GGAGTTGGCAACGCCGCCCGCGAGAGAGATGCCTGTGGGTAG 405
**** * * * ******** ** *** * * ** ** **
consensus_942#0 AAGTTTTCCACGGGATTTAACCTTCGCCTTTGGATGGAGGAGATCGGTTTAATCCTCCTC 468
consensus_942#1 GGACCCGTTCAAAGTGCCGATAACCGCTCTT--ACCTACAAGATTAGCAAACGCCTTCTC 463
* * *** ** * * **** * * *** ***
consensus_942#0 CTATTCGGCGGGAGCGCGAG-ACGGCCAAAGTGTAATTAGAACGATGTTTCAGAAGCGAT 527
consensus_942#1 AAGATCG-CGTTCCCGAAAGTACCGACGGAGATCATGCCGCCTCGTGTCCCCGGTCAGGT 522
*** ** ** ** ** * * ** * * *** * * * *
consensus_942#0 TTA-CCGACCGAGTCGTTCGCTTTCGNGCGATGGCGGAAAGCGATTGCTGCTCGCAACAA 586
consensus_942#1 CTCTCCGGCCGCGCTCAAGGCCCCTCCCCAAGGACGATAAACCTT--------------- 567
* *** *** * ** * * * ** ** * *
consensus_942#0 AA 588
consensus_942#1 --
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |