These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_956#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 449 fasta sequence [ATACAATAAATGGTGGAAAATATAGCAATTTAAATATACCAGTAACATCACAACAAGGATTAGCGCCACTTAGTCCCTATTTAAATTTTGATCCTGCATATCTTCCTCCAAGCCAACCAGAATATATATTTCCGGAAGGAGCAGCAAAACAAAGAGGAAGATTTGAATTGGCTTTTAGTCAGATTGGTGCAGCATGTATTATAGGAGCTGGTATTGGAGGTGCTACTGGTTTGTATAGAGGCATTAAAGCAACATCTTTAGCTGACCAAACTGGGAAACTTAGAAGAACACAATTAATCAATCATGTTATGAAAAGTGGATCGTCGTTAGCAAATACATTTGGAATAGTATCTGTGATGTATAGTGGATTTGGTGTGCTTTTATCTTGGGTCAGAGGTACAGATGATTCCTTAAATACATTAGCAGCAGCAACTGGAACAGGAATGTTG] [+] EMBL BI507629 [ATACAATAAATGGTGGAAAATATAGCAATTTAAATATACCAGTAACATCACAACAAGGATTAGCGCCACTTAGTCCCTATTTAAATTTTGATCCTGCATATCTTCCTCCAAGCTAACCAGAATATATATTTCCGGAAGGAGCAGCAAAACAAAGAGGAAGATTTGAATTGGCTTTTAGTCAGATTGGTGCAGCATGTATTATAGGAGCTGGTATTGGAGGTGCTACTGGTTTGTATAG ] [+] EMBL BI503195 [ ACAATAAATGGTGGAAAATATAGCAATTTAAATATACCAGTAACATCACAACAAGGATTAGCGCCACTTAGTCCCTATTTAAATTTTGATCCTGCATATCTTCCTCCAAGCCAACCAGAATATATATTTCCGGAAGGAGCAGCAAAACAAAGAGGAAGATTTGAATTGGCTTTTAGTCAGATTGGTGCAGCATGTATTATAGGAGCTGGTATTGGAGGTGCTACTGGTTTGTATAGAGGCATTAAAGCAACATCTTTAGCTGACCAAACTGGGAAACTTAGAAGAACACAATTAATCAATCATGTTATGAAAAGTGGATCGTCGTTAGCAAATACATTTGGAATAGTATCTGTGATGTATAGTGGATTTGGTGTGCTTTTATCTTGGGTCAGAGGTACAGATGATTCCTTAAATACATTAGCAGCAGCAACTGGAACAGGAATGTTG] consensusID : consensus_956#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 342 fasta sequence [TGTAAAAATAATCATTCATATATAATTTATATCAATTACAGAATGCAAACCCTTCTATCATTCCTTTGTTAGTACTACTAAGAAATTTAAATCACTATAAGAAAAATATTTAGGAATATTCAGAGTTTTTGCTGTTACACACAGTCTTACGCTGGATTTATATTGCGATGCCTCAATTCCAGTAAGGCTTCTCGATTAGTCCATAAGCAATATACAGATGCTATTCCTAGTCCTATACAACCACCCAATGCACATTTTTTTAAGCCAGTTGTAGATTTGAACAACATTCCTGTTCCAGTTGCTGCTGCTAATGTATTTAAGGAATCATCTGTACCTCTGACC] [+] EMBL BI507265 [TGTAAAAATAATCATTCATATATAATTTATATCAATTACAGAATGCAAACCCTTCTATCATTCCTTTGTTAGTACTACTAAGAAATTTAAATCACTATAAGAAAAATATTTAGGAATATTCAGAGTTTTTGCTGTTACACACAGTCTTACGCTGGATTTATATTGCGATGCCTCAATTCCAGTAAGGCTTCTCGATTAGTCCATAAGCAATATACAGATGCTATTCCTAGTCCTATACAACCACCCAATGCACATTTTTTTAAGCCAGTTGTAGATTTGAACAACATTCCTGTTCCAGTTGCTGCTGCTAATGTATTTAAGGAATCATCTGTACCTCTGACC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_956#0 ATACAATAAATGGTGGAAAATATAGCAATTTAAATATACCAGTAACATCACAACAAGGAT 60 consensus_956#1 ----------------------------------TGTAAAAATAATCATTCATATATAAT 26 * ** * *** ** * ** consensus_956#0 TAGCGCCACTTAGTCCCTATTTAAATTTTGATCCTGCATATCTTCCTCCAAGCCAACCAG 120 consensus_956#1 TTATATCAATTA--CAGAATGCAAACCCT--TCTATCATTCCTTTGTTAGTACTACTAAG 82 * ** *** * ** *** * ** *** *** * * * ** consensus_956#0 AA-TATATATTTCCGGAAGGAGCAGCAAAACAAAGAGGAAGATTTGAATTGGCTTTTAGT 179 consensus_956#1 AAATTTAAATCACTATAAGAA------AAATATTTAGGAATATTCAGA---GTTTTTG-- 131 ** * ** ** * *** * *** * ***** *** * * **** consensus_956#0 CAGATTGGTGCAGCATGTATTATAG-GAGCTGGTATTGGAGGTGCTACTGGTTTGTATAG 238 consensus_956#1 ----CTGTTACACACAGTCTTACGCTGGATTTATATTGC-GATGC--CTCAATTCCAGTA 184 ** * ** ** *** * * ***** * *** ** ** * consensus_956#0 AGGCATTAAAGCAACATCTTTAGCTGACCA-AACTGGGAAACTTAGAAGAACACAATTAA 297 consensus_956#1 AGGCTTCTCGATTAGTCCATAAGCAATATACAGATGCTATTCCTAGTCCTATACAACCAC 244 **** * * * * *** * * ** * * *** * **** * consensus_956#0 TCAAT-CATGTTATGAAAAGTGGATCGTCGTTAGCAAATACATTTGGAATAGTATCTGTG 356 consensus_956#1 CCAATGCACATTTTTTTAAGCCAGTTGTAGATTTGAACAACATTCCTGTTCCAGTTGCTG 304 **** ** ** * *** * ** * * ** ***** * * ** consensus_956#0 ATGTATAGTGGATTTGGTG---TGCTTTTATCTTGGGTCAGAGGTACAGATGATTCCTTA 413 consensus_956#1 CTGC-TAATGTATTTAAGGAATCATCTGTACCTCTGACC--------------------- 342 ** ** ** **** * * ** ** * * consensus_956#0 AATACATTAGCAGCAGCAACTGGAACAGGAATGTTG 449 consensus_956#1 ------------------------------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |