Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 97 cluster # 97       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_97#0 length = 979 sequences # 8  

consensusID : consensus_97#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 979
fasta sequence
                              [TTCAAGAAATAGTCAAGTCTGTCAATGTTAATTTAAATCGAAGTTTTTAATATTTTTGTGGCGTGGCTCGAATAAACTCTTAGTATTCGTATA-TGTAAATCAGAAAATTATGTGGAAGGCAGTGTTGTTGATCGCAATCCTGTCCGCTGCAACGAATAAAAGTGTTGCAAACGACTGCGTGCCACGAAGTTTCGGGACAAATAATATCGTATGCGTTTGCAACTCGACTTACTGCGACAGCACACCGGAACCGAAGCCGAGCAGTCCAGAAAAAGGTACTTTTCACTGGTACGTATCGAGCAGAGATGGCCTCAGGCTGAGCTTGTCAAAAGGACAAATGGGCCGTTGTCAAAACGATGGATCTTTAACCCTGAACATCGATACCTCGAAAAGATATCAAACGATCCTCGGTTTTGGTGGCGCTTTTACCGACTCGGCGGGAATGAATATCAAGAATCTGAGCGAGGCTACTCAGGATCAATTAATCAGAGCGTATTTCGATCCGAAAGATGGAAGTAGATACACGTTAGGCCGTATACCAATAGGAGGAACAGACTTCTCTACGAGAGCCTATACATTGGACGATTACGATGACGATGCGACGTTGCAACATTTCGCGCTTGCTCCTGAAGATGTCGAGTATAAGATACCGTATGCGAGGAAAGCTGTCGAATTGAATCCCGATTTAAGATTCTTTAGCGCCGCGTGGTCGGCGCCGACATGGATGAAAACTAATCACAAAATCAATGGATTTGGTTTCTTGAAGACCGAATATTATCAGACTTTTGCCAATTACATATTGAAATTCATAGAGGAATATAAAAAGAATGGAGTAGATANNNNGGGNNGTTTCAACTGGAAACGAACCATTCGATGCCTATATTCCTTTTGAACGTCTTAACAGTATGGGATGGACACCAGAGCTGGTTGGCGATTGGATCGCTAACAACTTGGGCCCAACTTTGGCAAATTCCGAATA]

[+] EMBL BI946416             [TTCAAGAAATAGTCAAGTCTGTCAATGTTAATTTAAATCGAAGTTTTTAATATTTTTGTGGCGTGGCTCGAATAAACTCTTAGTATTCGTATA TGTAAATCGGAAAATTATGTGGAAGGCAGTGTTGTTGATCGCAATCCTGTCCGCTGCAACGAATAAAAGTGTTGCAAACGACTGCGTGCCACGAAGTTTCGGGACAAATAATATCGTATGCGTTTGCAACTCGACTTACTGCGACAGCACACCGGAACCGAAGCCGAGCAGTCCAGAAAAAGGTACTTTTCACTGGTACGTATCGAGCAGAGATGGCCTCAGGCTGAGCTTGTCAAAAGGACAAATGGGCCGTTGTCAAAACGATGGATCTTTAACCCTGAACATCGATACCTCGAAAAGATATCAAACGATCCTCGGTTTTGGTGGCGCTTTTACCGACTCGGCGGGAATGAATATCAAGAATCTGAGCGAGGCTACTCAGGATCAATTAATCAGAGCGTATTTCGATCCGAAAGATGGAAGTAGATACACGTTAGGCCGTATACCAATAGGAGGAACAGACTTCTCTACGAGAGCCTATACATTGGACGATTAC                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BI517247             [                                  AAATCGAAGTTTTTAATATTTTTGTGGCGTGGCTCGAATAAACTCTTAATATTCGTATA TGTAAATCAGAAAATTATGTGGAAGGCAGTGTTGTTGATCGCAATCCTGTCCGCTGCAACGAATAAAAGTGTTGCAAACGACTGCGTGCCACGAAGTTTCGGGACAAATAATATCGTATGCGTTTGCAACTCGACTTACTGCGACAGCACACCGGAACCGAAGCCGAGCAGTCCAGAAAAAGGTACTTTTCACTGGTACGTATCGAGCAGNGATGGCCTCAGGCTGAGCTTGTCAAAAGGACAAATGGGCCGTTGTCAAAACGATGGATCTTTAACCCTGAACATCGATACCTCGAAAAGATATCAAACGATCCTCGGTTTTGGTGGCGCTTTTACCGACTCGGCGGGAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BI515300             [                                                                              aTTAGCAAACAAAAATTAAAAATCAGAAAATTATGTGGAAGGCAGTGTTGTTGATCGCAATCCTGTCCGCTGCAACGAATAAAAGTGTTGCAAACGACTGCGTGCCACGAAGTTTCGGGACAAATAATATCGTATGCGTTTGCAACTCGACTTACTGCGACAGCACACCGGAACCGAAGCCGAGCAGTCCAGAAAAAGGTACTTTTCACTGGTACGTATCGAGCAGAGATGGCCTCAGGCTGAGCTTGTCAAAAGGACAAATGGGCCGTTGTCAAAACGATGGATCTTTAACCCTGAACATCGATACCTCGAAAAGATATCAAACGATCCTCGGTTTTGGTGGCGCTTTTACCGACTCGGCGGGAATGAATATCAAGAATCTGAGCGAGGCTACTCAGGATCAATTAATCAGAGCATATTTCGATCCGAAAGATGGAAGTAGATACACGTTAGGCCGTATACCAATAGGAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BI512426             [                                                                                                       GAAAATTATGTGGAAGGCAGTGTTGTTGATCGCAATCCTGTCCGCTGCAACGAATAAAAGTGTTGCAAACGACTGCGTGCCACGAAGTTTCGGGACAAATAATATCGTATGCGTTTGCAACTCGACTTACTGCGACAGCACACCGGAACCGAAGCCGAGCAGTCCAGAAAAAGGTACTTTTCACTGGTACGTATCGAGCAGAGATGGCCTCAGGCTGAGCTTGTCAAAAGGACAAATGGGCCGTTGTCAAAACGATGGATCTTTAACCCTGAACATCGATACCTCGAAAAGATATCAAACGATCCTCGGTTTTGGTGGCGCTTTTACCGACTCGGCGGGAATGAATATCAAGAATCTGAGCGAGGCTACTCAGGATCAATTAATCAGAGCGTATTTCGATCCGAAAGATGGAAGTAGATACACGTTAGGCCGTATACCAATAGGAGGAACAGACTTCTCTACGAGAGCCTATACATTGGACGATTACGATGACGATGCGACGTTGCAA                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BI514402             [                                                                                                                    AAGGCAGTGTTGTTGATCGCAATCCTGTCCGCTGCAACGAATAAAAGTGTTGCAAACGACTGCGTGCCACGAAGTTTCGGGACAAATAATATCGTATGCGTTTGCAACTCGACTTACTGCGACAGCACACCGGAACCGAAGCCGAGCAGTCCAGAAAAAGGTACTTTTCACTGGTACGTATCGAGCAGAGATGGCCTCAGGCTGAGCTTGTCAAAAGGACAAATGGGCCGTTGTCAAAACGATGGATCTTTAACCCTGAACATCGATACCTCGAAAAGATATCAAACGATCCTCGGTTTTGGTGGCGCTTTTACCGACTCGGCGGGAATGAATATCAAGAATCTGAGCGAGGCTACTCAGGATCAATTAATCAGAGCGTATTTCGATCCGAAAGATGGAAGTAGATACACGTTAGGCCGTATACCAATAGGAGGAACAGACTTCTCTACGAGAGCCTATACATTGGACGATTACGATGACGATGCGACGTTGCAACATTTCGCGCTTGCTCCTGAAGATGTCGAGT                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BI515443             [                                                                                                                               GTTGATCGCAATCCTGTCCGCTGCAACGAATAAAAGTGTTGCAAACGACTGCGTGCCACGAAGTTTCGGGACAAATAATATCGTATGCGTTTGCAACTCGACTTACTGCGACAGCACACCGGAACCGAAGCCGAGCAGTCCAGAAAAAGGTACTTTTCACTGGTACGTATCGAGCAGAGATGGCCTCAGGCTGAGCTTGTCAAAAGGACAAATGGGCCGTTGTCAAAACGATGGATCTTTAACCCTGAACATCGATACCTCGAAAAGATATCAAACGATCCTCGGTTTTGGTGGCGCTTTTACCGACTCGGCGGGAATGAATATCAAGAATCTGAGCGAGGCTACTCAGGATCAATTAATCAGAGCATATTTCGATCCGAAAGATGGAAGTAGATACACGTTAGGCCGTATACCAATAGGAGGAACAGACTTCTCTACGNNAGCCTATACATTGGACGATTACGATGACGATGCGACGT                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BI506528             [                                                                                                                                                                                                                                                                                                                                                                                     GAACATCGATACCTCGAAAAGATATCAAACGATCCTCGGTTTTGGTGGCGCTTTTACCGACTCGGCGGGAATGAATATCAAGAATCTGAGCGAGGCTACTCAGGATCAATTAATCAGAGCATATTTCGATCCGAAAGATGGAAGTAGATACACGTTAGGCCGTATACCAATAGGAGGAACAGACTTCTCTACGAGAGCCTATACATTGGACGATTACGATGACGATGCGACGTTGCAACATTTCGCGCTTGCTCCTGAAGATGTCGAGTATAAGATACCGTATGCGAGGAAAGCTGTCGAATTGAATCCCGATTTAAGATTCTTTAGCGCCGCGTGGTCGGCGCCGACATGGATGAAAACTAATCACAAAATCAATGGATTTGGTTTCTTGAAGACCGAATATTATCAGACTTTTGCCAATTACATATTGAAATTCATAGAGGAATATAAAAAGAATGGAGTAGATANNNNGGGNNGTTTCAACTGGAAACGAACCATTCGATGCCTATATTCCTTTTGAACGTCTTAACAGTATGGGATGGACACCAGAGCTGGTTGGCGATTGGATCGCTAACAACTTGGGCCCAACTTTGGCAAATTCCGAATA]
[+] EMBL BI508765             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCTCTACGAGAGCCTATACATTGGACGATTACGATGACGATGCGACGTTGCAACATTTCGCGCTTGCTCCTGAAGATGTCGAGTATAAGATACCGTATGCGAGGAAAGCTGTCGAATTGAATCCCGATTTAAGATTCTTTAGCGCCGCGTGGTCGGCGCCGACATGGATGAAAACTAATCACAAAATCAATGGATTTGGTTTCTTGAAGACCGAATATTATCAAACTTTTGCCAATTACATATTGAAATTCATAGAGGAATATAAAAAGAATGGAGTAGATA TATGGGGTGTTTCAACTGGAAACGAACCATTCGATGCCTATATTCCTTTTGAACGTCTTAACAGTA                                                                         ]


>consensus_97#0 TTCAAGAAATAGTCAAGTCTGTCAATGTTAATTTAAATCGAAGTTTTTAATATTTTTGTG GCGTGGCTCGAATAAACTCTTAGTATTCGTATATGTAAATCAGAAAATTATGTGGAAGGC AGTGTTGTTGATCGCAATCCTGTCCGCTGCAACGAATAAAAGTGTTGCAAACGACTGCGT GCCACGAAGTTTCGGGACAAATAATATCGTATGCGTTTGCAACTCGACTTACTGCGACAG CACACCGGAACCGAAGCCGAGCAGTCCAGAAAAAGGTACTTTTCACTGGTACGTATCGAG CAGAGATGGCCTCAGGCTGAGCTTGTCAAAAGGACAAATGGGCCGTTGTCAAAACGATGG ATCTTTAACCCTGAACATCGATACCTCGAAAAGATATCAAACGATCCTCGGTTTTGGTGG CGCTTTTACCGACTCGGCGGGAATGAATATCAAGAATCTGAGCGAGGCTACTCAGGATCA ATTAATCAGAGCGTATTTCGATCCGAAAGATGGAAGTAGATACACGTTAGGCCGTATACC AATAGGAGGAACAGACTTCTCTACGAGAGCCTATACATTGGACGATTACGATGACGATGC GACGTTGCAACATTTCGCGCTTGCTCCTGAAGATGTCGAGTATAAGATACCGTATGCGAG GAAAGCTGTCGAATTGAATCCCGATTTAAGATTCTTTAGCGCCGCGTGGTCGGCGCCGAC ATGGATGAAAACTAATCACAAAATCAATGGATTTGGTTTCTTGAAGACCGAATATTATCA GACTTTTGCCAATTACATATTGAAATTCATAGAGGAATATAAAAAGAATGGAGTAGATAN NNNGGGNNGTTTCAACTGGAAACGAACCATTCGATGCCTATATTCCTTTTGAACGTCTTA ACAGTATGGGATGGACACCAGAGCTGGTTGGCGATTGGATCGCTAACAACTTGGGCCCAA CTTTGGCAAATTCCGAATA



clustalw multiple alignements is not computed in this case


Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)