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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_98#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 605 fasta sequence
[GCGTGCGGGCAAAATAATTGTTACGCGCGAAGAGCATGGCTAGCAACACGAAGCAAGCCTTCATCTATTCTCTCGCCCTCCTCTGCCTCCACGCGATTTTCGTGAACGCAGCGCCGGATTGGGTGCCGCCCGAGGTGTTCGATTTGGTCGCGGAGGACAAGGCTCGGTGCATGAGCGAGCACGGGACGACGCAAGCGCAAATCGACGACGTGGACAAAGGGAACCTGGTAAACGAACCGTCCATCACTTGCTACATGTATTGCTTGTTGGAGGCGTTCAGCTTGGTGGACGATGAAGCGAACGTGGACGAGGATATAATGCTGGGCCTGTTGCCGGATCAACTTCAGGAAAGGGCTCAGTCGGTCATGGGCAAATGCCTTCCAACCTCCGGCTCCGATAATTGCAACAAGATATACAATCTCGCCAAATGCGTCCAAGAATCTGCACCGGACGTATGGTTCGTTATCTAAGGGGACGCGACGAGAAGACTATTTTTCTGGGAGGATCGAGAACAGGCTGTGTTGAAAGAAAGAAATAATTGCGAAATAAAAAAAAAAAAAAAAAACTCCAGACTAGGTTAATTGCCACTCCCTTGCGACCGAAAC]
[+] EMBL BE844260 [GCGTGCGGGCAAAATAATTGTTACGCGCGAAGAGCATGGCTAGCAACACGAAGCAAGCCTTCATCTATTCTCTCGCCCTCCTCTGCCTCCACGCGATTTTCGTGAACGCAGCGCCGGATTGGGTGCCGCCCGAGGTGTTCGATTTGGTCGCGGAGGACAAGGCTCGGTGCATGAGCGAGCACGGGACGACGCAAGCGCAAATCGACGACGTGGACAAAGGGAACCTGGTAAACGAACCGTCCATCACTTGCTACATGTATTGCTTGTTGGAGGCGTTCAGCTTGGTGGACGATGAAGCGAACGTGGACGAGGATATAATGCTGGGCCTGTTGCCGGATCAACTTCAGGAAAGGGCTCAGTCGGTCATGGGCAAATGCCTTCCAACCTCCGGCTCCGATA ]
[+] EMBL AF393494 [ CGGGCAAAATAATTGTTACGCGCGAAGAGCATGGCTAGCAACACGAAGCAAGCCTTCATCTATTCTCTCGCCCTCCTCTGCCTCCACGCGATTTTCGTGAACGCAGCGCCGGATTGGGTGCCGCCCGAGGTGTTCGATTTGGTCGCGGAGGACAAGGCTCGGTGCATGAGCGAGCACGGGACGACGCAAGCGCAAATCGACGACGTGGACAAAGGGAACCTGGTAAACGAACCGTCCATCACTTGCTACATGTATTGCTTGTTGGAGGCGTTCAGCTTGGTGGACGATGAAGCGAACGTGGACGAGGATATAATGCTGGGCCTGTTGCCGGATCAACTTCAGGAAAGGGCTCAGTCGGTCATGGGCAAATGCCTTCCAACCTCCGGCTCCGATAATTGCAACAAGATATACAATCTCGCCAAATGCGTCCAAGAATCTGCACCGGACGTATGGTTCGTTATCTAAGGGGACGCGACGAGAAGACTATTTTTCTGGGAGGATCGAGAACAGGCTGTGTTGAAAGAAAGAAATAATTGCGAAATAAA ]
[+] EMBL BE844410 [ CGGGCAAAATAATTGTTACGCGCGAAGAGCATGGCTAGCAACACGAAGCAAGCCTTCATCTATTCTCTCGCCCTCCTCTGCCTCCACGCGATTTTCGTGAACGCAGCGCCGGATTGGGTGCCGCCCGAGGTGTTCGATTTGGTCGCGGAGGACAAGGCTCGGTGCATGAGCGAGCACGGGACGACGCAAGCGCAAATCGACGACGTGGACAAAGGGAACCTGGTAAACGAACCGTCCATCACTTGCTACATGTATTGCTTGTTGGAGGCGTTCAGCTTGGTGGACGATGAAGCGAACGTGGACGAGGATATAATGCTGGGCCTGTTGCCGGATCAACTTCAGGAAAGGGCTCAGTCGGTCATGGGCAAATGCCTTCCAACCTCCGGCTCCGATAATTGCAACAAGATATACAATCTCGCCAAATGCGTCCAAGAATCTGCACCGGACGTATGGTTCGTTATCTAAGGGGACGCGACGAGAAGACTATTTTTCTG ]
[+] EMBL BE844457 [ CGCGCGAAGAGCATGGCTAGCAACACGAAGCAAGCCTTCATCTATTCTCTCGCCCTCCTCTGCCTCCACGCGATTTTCGTGAACGCAGCGCCGGATTGGGTGCCGCCCGAGGTGTTCGATTTGGTCGCGGAGGACAAGGCTCGGTGCATGAGCGAGCACGGGACGACGCAAGCGCAAATCGACGACGTGGACAAAGGGAACCTGGTAAACGAACCGTCCATCACTTGCTACATGTATTGCTTGTTGGAGGCGTTCAGCTTGGTGGACGATGAAGCGAACGTGGACGAGGATATAATGCTGGGCCTGTTGCCGGATCAACTTCAGGAAAGGGCTCAGTCGGTCATGGGCAAATGCCTTCCAACCTCCGGCTCCGATAATTGCAACAAGATATACAATCTCGCCAAATGCGTCCAAGAATCTGCACCGGACGTATGGTTCGTTATCTAAGGGGACGCGACGAGAAGACTATTTTTCTGGGAGGATCGAGAACAGGCTGTGTTGAAAGAAAGAAATAATTGCGAAATTAAAAAAAAAAAAAAAAACTCCAGACTAGGTTAATTGCCACTCCCTTGCGACCGAAAC]
[+] EMBL AF166496 [ GAAGCAAGCCTTCATCTATTCTCTCGCCCTCCTCTGCCTCCACGCGATTTTCGTGAACGCAGCGCCGGATTGGGTGCCGCCCGAGGTGTTCGATTTGGTCGCGGAGGACAAGGCTCGGTGCATGAGCGAGCACGGGACGACGCAAGCGCAAATCGACGACGTGGACAAAGGGAACCTGGTAAACGAACCGTCCATCACTTGCTACATGTATTGCTTGTTGGAGGCGTTCAGCTTGGTGGACGATGAAGCGAACGTGGACGAGGATATAATGCTGGGCCTGTTGCCGGATCAACTTCAGGAAAGGGCTCAGTCGGTCATGGGCAAATGCCTTCCAACCTCCGGCTCTGATAATTGCAACAAGATATACAATCTCGCCAAATGCGTCCAAGAATCTGCACCGGACGTA ]
consensusID : consensus_98#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 517 fasta sequence
[GACAAGGCTCGGTGCATGAGCGAGCACGGGACGACGGCAAGCGCAAATCGACGACGTGGACAAAGGGAACCTGGTAAACGAACCGTCCATCACTTGCTACATGTATTGCTTGTTGGAGGCGTTCAGCTTGGTGGACGATGAAGCGAACGTGGACGAGGAAATAATGCTGGGCCTGTCTGCCGGATCAACTTCAGGAAAGGGCTCAGTCGGTCATGGGCAAATGCCTTCCAACCTCCGGCTCCGATAATTGCAACAAGATATACAATCTCGCCAAATGCGTCCAAGAATCTGCACCGGACGTATGGTTCGTTATCTAAGGGGACGCGACGAGAAGACTATTTTTCTGGGAGGATCGAGAACAGGCTGTGTTGAAAGAAAGAAATAATTGCGAAATAAATAAAAAAAAGAAAAAGGAGAGACTCTCCCAGAAGAAGAAAATCCCAGAAGAAAATGCTGATACGATAACCGGTGAAGAGATAAATACATAAAAATGTGTATAATGTAGGTGAGAAAAGTG]
[-] EMBL BE844676 [GACAAGGCTCGGTGCATGAGCGAGCACGGGACGACGGCAAGCGCAAATCGACGACGTGGACAAAGGGAACCTGGTAAACGAACCGTCCATCACTTGCTACATGTATTGCTTGTTGGAGGCGTTCAGCTTGGTGGACGATGAAGCGAACGTGGACGAGGATATAATGCTGGGCCTGT TGCCGGATCAACTTCAGGAAAGGGCTCAGTCGGTCATGGGCAAATGCCTTCCAACCTCCGGCTCCGATAATTGCAACAAGATATACAATCTCGCCAAATGCGTCCAAGAATCTGCACCGGACGTATGGTTCGTTATCTAAGGGGACGCGACGAGAAGACTATTTTTCTGGGAGGATCGAGAACAGGCTGTGTTGAAAGAAAGAAATAATTGCGAAATAAATAAAAAAAAGAAAAAGGAGAGACTCTCCCAGAAGAAGAAAATCCCAGAAGAAAATGCTGATACGATAACCGGTGAAGAGATAAATACATAAAAATGTGTATAATGTAGGTGAGAAAAGTG]
[-] EMBL BE844411 [ tACTAATGCTGGGCCTGTCTGCCGGATCAACTTCAGGAAAGGGCTCAGTCGGTCATGGGCAAATGCCTTCCAACCTCCGGCTCCGATAATTGCAACAAGATATACAATCTCGCCAAATGCGTCCAAGAATCTGCACCGGACGTATGGTTCGTTATCTAAGGGGACGCGACGAGAAGACTATTTTTCTGGGAGGATCGAGAACAGGCTGTGTTGAAAGAAAGAAATAATTGCGAAATAAA ]
consensusID : consensus_98#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 420 fasta sequence
[GAGCATGGCTAGCAACACGAAGCAAGCCTTCATCTATTCTCTCGCCCTCCTCTGCCTCCACGCGATTTTCGTGAACGCAGCGCCGGATTGGGTGCCGCCCGAGGTGTTCGATTTGGTCGCGGAGGACAAGGCTCGGTGCATGAGCGAGCACGGGACGACGCAAGCGCAAATCGACGACGTGGACAAAGGGAACCTGGTAAACGAACCGTCCATCACTTGCTACATGTATTGCTTGTTGGAGGCGTTCAGCTTGGTGGACGATGAAGCGAACGTGGACGAGGATATAATACAATCTCGCCAAATGCGTCCAAGAATCTGCACCGGACGTATGGTTCGTTATCTAAGGGGACGCGACGAGAAGACTATTTTTCTGGGAGGATCGAGAACAGGCTGTGTTGAAAGAAAGAAATAATTGCGAAA]
[-] EMBL BE844283 [GAGCATGGCTAGCAACACGAAGCAAGCCTTCATCTATTCTCTCGCCCTCCTCTGCCTCCACGCGATTTTCGTGAACGCAGCGCCGGATTGGGTGCCGCCCGAGGTGTTCGATTTGGTCGCGGAGGACAAGGCTCGGTGCATGAGCGAGCACGGGACGACGCAAGCGCAAATCGACGACGTGGACAAAGGGAACCTGGTAAACGAACCGTCCATCACTTGCTACATGTATTGCTTGTTGGAGGCGTTCAGCTTGGTGGACGATGAAGCGAACGTGGACGAGGATATAATACAATCTCGCCAAATGCGTCCAAGAATCTGCACCGGACGTATGGTTCGTTATCTAAGGGGACGCGACGAGAAGACTATTTTTCTGGGAGGATCGAGAACAGGCTGTGTTGAAAGAAAGAAATAATTGCGAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_98#0 GCGTGCGGGCAAAATAATTGTTACGCGCGAAGAGCATGGCTAGCAACACGAAGCAAGCCT 60
consensus_98#2 -------------------------------GAGCATGGCTAGCAACACGAAGCAAGCCT 29
consensus_98#1 ------------------------------------------------------------
consensus_98#0 TCATCTATTCTCTCGCCCTCCTCTGCCTCCACGCGATTTTCGTGAACGCAGCGCCGGATT 120
consensus_98#2 TCATCTATTCTCTCGCCCTCCTCTGCCTCCACGCGATTTTCGTGAACGCAGCGCCGGATT 89
consensus_98#1 ------------------------------------------------------------
consensus_98#0 GGGTGCCGCCCGAGGTGTTCGATTTGGTCGCGGAGGACAAGGCTCGGTGCATGAGCGAGC 180
consensus_98#2 GGGTGCCGCCCGAGGTGTTCGATTTGGTCGCGGAGGACAAGGCTCGGTGCATGAGCGAGC 149
consensus_98#1 -----------------------------------GACAAGGCTCGGTGCATGAGCGAGC 25
*************************
consensus_98#0 ACGGGACGACG-CAAGCGCAAATCGACGACGTGGACAAAGGGAACCTGGTAAACGAACCG 239
consensus_98#2 ACGGGACGACG-CAAGCGCAAATCGACGACGTGGACAAAGGGAACCTGGTAAACGAACCG 208
consensus_98#1 ACGGGACGACGGCAAGCGCAAATCGACGACGTGGACAAAGGGAACCTGGTAAACGAACCG 85
*********** ************************************************
consensus_98#0 TCCATCACTTGCTACATGTATTGCTTGTTGGAGGCGTTCAGCTTGGTGGACGATGAAGCG 299
consensus_98#2 TCCATCACTTGCTACATGTATTGCTTGTTGGAGGCGTTCAGCTTGGTGGACGATGAAGCG 268
consensus_98#1 TCCATCACTTGCTACATGTATTGCTTGTTGGAGGCGTTCAGCTTGGTGGACGATGAAGCG 145
************************************************************
consensus_98#0 AACGTGGACGAGGATATAATGCTGGGCCTGT-TGCCGGATCAACTTCAGGAAAGGGCTCA 358
consensus_98#2 AACGTGGACGAGGATATAAT---------------------------------------- 288
consensus_98#1 AACGTGGACGAGGAAATAATGCTGGGCCTGTCTGCCGGATCAACTTCAGGAAAGGGCTCA 205
************** *****
consensus_98#0 GTCGGTCATGGGCAAATGCCTTCCAACCTCCGGCTCCGATAATTGCAACAAGATATACAA 418
consensus_98#2 --------------------------------------------------------ACAA 292
consensus_98#1 GTCGGTCATGGGCAAATGCCTTCCAACCTCCGGCTCCGATAATTGCAACAAGATATACAA 265
****
consensus_98#0 TCTCGCCAAATGCGTCCAAGAATCTGCACCGGACGTATGGTTCGTTATCTAAGGGGACGC 478
consensus_98#2 TCTCGCCAAATGCGTCCAAGAATCTGCACCGGACGTATGGTTCGTTATCTAAGGGGACGC 352
consensus_98#1 TCTCGCCAAATGCGTCCAAGAATCTGCACCGGACGTATGGTTCGTTATCTAAGGGGACGC 325
************************************************************
consensus_98#0 GACGAGAAGACTATTTTTCTGGGAGGATCGAGAACAGGCTGTGTTGAAAGAAAGAAATAA 538
consensus_98#2 GACGAGAAGACTATTTTTCTGGGAGGATCGAGAACAGGCTGTGTTGAAAGAAAGAAATAA 412
consensus_98#1 GACGAGAAGACTATTTTTCTGGGAGGATCGAGAACAGGCTGTGTTGAAAGAAAGAAATAA 385
************************************************************
consensus_98#0 TTGCGAAATAAAAAAAAAAAAAAAAAACTCCAGACTAGGTTAATTGCCACTCCCTTGCGA 598
consensus_98#2 TTGCGAAA---------------------------------------------------- 420
consensus_98#1 TTGCGAAATAAATAAAAAAAAGAAAAAGGAGAGACTCTCCCAGAAGAAGAAAATCCCAGA 445
********
consensus_98#0 CCGAAAC----------------------------------------------------- 605
consensus_98#2 ------------------------------------------------------------
consensus_98#1 AGAAAATGCTGATACGATAACCGGTGAAGAGATAAATACATAAAAATGTGTATAATGTAG 505
consensus_98#0 ------------
consensus_98#2 ------------
consensus_98#1 GTGAGAAAAGTG 517
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |