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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_982#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 662 fasta sequence
[AAAATGTACCTAGAACCTATTCTACGCTCTCCCTCGTCCTTATTCCTTTTAAAAAAATGCGCCCTTTTCCTCCCCCGTCCAAGCATATCTTCCCCTTCTTCCCCCCTCCCCAGTCCCGAAAAAAAAGTAATTGTCTCGCNGNTTCAGATTTCTTCTGTGCGATTCTAATCTTGATATAACACTTGAAGTCAATTACACGATTAATTAATCCAAAGGTGTATACATTATAACTATATATTTGATTCTAATAGAGAGAGATATACGCTCGTATGTTTTTCCTTGCGAATTTTTCGATAATATAAATATAATAATAATAACGAGACACAAATAAGTTGAATTGAATAATATTCTAATAGTTACTATACGGAGTGTGTTGAGTCATTGTCCGCGTCATCCGCGTTTCGATGTTAAAGAAGTGGCATGAGTTTCGGTGCAACATCCAAGCGAAATCATATTCGCGATCGAGAATTAGAGAAGGAAAGCGATCAATTGGGCGACAAAGAAATGAAACCCCGACAATTCCAGAAACAGATTGAAACTTGCAACACAGGAACACAACAGTGTATAGCGTTAAAAACAATAGACTGTTTCCCCATTTCCTTGCGCTCTCTTTAACTATTTTCTCTGTCTGTNCTCCTCTCTGTTTCGATCTCTCTCTCTCT]
[+] EMBL BI505835 [AAAATGTACCTAGAACCTATTCTACGCTCTCCCTCGTCCTTATTCCTTTTAAAAAAATGCGCCCTTTTCCTCCCCCGTCCAAGCATATCTTCCCCTTCTTCCCCCCTCCCCAGTCCCGAAAAAAAAGTAATTGTCTCGCAGATTCAGATTTCTTCTGTGCGATTCTAATCTTGATATAACACTTGAAGTCAATTACACGATTAATTAATCCAAAGGTGTATACATTATAACTATATATTTGATTCTAATAGAGAGAGATATACGCTCGTATGTTTTTCCTTGCGAATTTTTCGATAATATAAATATAATAATAATAACGAGACACAAATAAGTTGAATTGAATAATATTCTAATAGTTACTATACGGAGTGTGTTGAGTCATTGTCCGCGTCATCCGCGTTTCGATGTTAAAGAAGTGGCATGAGTTTCGGTGCAACATCCAAGCGAAATCATATTCGCGATCGAGAATTAGAGAAGGAAAGCGATCAATTGGGCGACAAAGAAATGAAACCCCGACAATTCCAGAAACAGATTGAAACTTGCAACACAGGAACACAACAGTGTATAGCGTTAAAAACAATAGACTGTTTCCCCATTTC ]
[+] EMBL BI511361 [ TCTCGCNGNTTCAGATTTCTTCTGTGCGATTCTAATCTTGATATAACACTTGAAGTCAATTACACGATTAATTAATCCAAAGGTGTATACATTATAACTATATATTTGATTCTAATAGAGAGAGATATACGCTCGTATGTTTTTCCTTGCGAATTTTTCGATAATATAAATATAATAATAATAACGAGACACAAATAAGTTGAATTGAATAATATTCTAATAGTTACTATACGGAGTGTGTTGAGTCATTGTCCGCGTCATCCGCGTTTCGATGTTAAAGAAGTGGCATGAGTTTCGGTGCAACATCCAAGCGAAATCATATTCGCGATCGAGAATTAGAGAAGGAAAGCGATCAATTGGGCGACAAAGAAATGAAACCCCGACAATTTCAGAAACAGATTGAAACTTGCAACACAGGAACACAACAGTGTATAGCGTTAAAAACAATAGACTGTTTCCCCATTTCCTTGCGCTCTCTTTAACTATTTTCTCTGTCTGTNCTCCTCTCTGTTTCGATCTCTCTCTCTCT]
consensusID : consensus_982#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 584 fasta sequence
[GACGGGGGAGGAAAAGGGCGCATTTTTTTAAAAGGAATAAGGACGAGGGAGAGCGTAGAATAGGTTCTAGGTACATTTTAAAGCGTTTTTACAATCTAAAGAGATCGTTTACGGAGAGAAAGAATGCGAGTCTCTCCGCGGATCTTCGAAAATCATCGCGATATGTCATCACACTCTATTCTCATTGGACTTTCTTCTTTGTTACTTTCGAGTAGCAAAATAACGGCGTTCTCTAGTTTTTTTTTGATCTCTGTTACTTTTTTTCTCCTCCCCCCCTTTTTTCTTTATAAGTCGACTGATCTTCGAAGATCTTACGCGCGATAAGAGAAGATCCAACCAACGACATCGACATCGACAGACAAGAGAGAGAGAGAGAGAGAGACAGTTTGCATGCACGTTGAGACACGAAAGAGAGAGACAGAGAGAAGACAGACAGAGAGAAAGATAGAGAAAGAGACAGAGATATATATATAAAAAGAAAGAGAGATTATGTCAAGTAGATTCAGATGCGAAGCACGTCCACTTCGCTTTCTTNNTCTTCTTCCATTTCTTTTTAATCGCCTCGTTCGATAGAAATTTATATA]
[+] EMBL BI503129 [GACGGGGGAGGAAAAGGGCGCATTTTTTTAAAAGGAATAAGGACGAGGGAGAGCGTAGAATAGGTTCTAGGTACATTTTAAAGCGTTTTTACAATCTAAAGAGATCGTTTACGGAGAGAAAGAATGCGAGTCTCTCCGCGGATCTTCGAAAATCATCGCGATATGTCATCACACTCTATTCTCATTGGACTTTCTTCTTTGTTACTTTCGAGTAGCAAAATAACGGCGTTCTCTAGTTTTTTTTTGATCTCTGTTACTTTTTTTCTCCTCCCCCCCTTTTTTCTTTATAAGTCGACTGATCTTCGAAGATCTTACGCGCGATAAGAGAAGATCCAACCAACGACATCGACATCGACAGACAAGAGAGAGAGAGAGAGAGAGACAGTTTGCATGCACGTTGAGACACGAAAGAGAGAGACAGAGAGAAGACAGACAGAGAGAAAGATAGAGAAAGAGACAGAGATATATATATAAAAAGAAAGAGAGATTATGTCAAGTAGATTCAGATGCGAAGCACGTCCACTTCGCTTTCTTNNTCTTCTTCCATTTCTTTTTAATCGCCTCGTTCGATAGAAATTTATATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_982#0 AAAATGTACCTAGAACCTATTCTACGCTCTCCCTCGTCCTTATTCCTTTTAAAAAAATGC 60
consensus_982#1 ------GACGGGGGAGGAAAAGGGCGCATTTTTTTAAAAGGAATAAGGACGAGGGAGAGC 54
** * * * *** * * * * * * **
consensus_982#0 GCCCTTTTCCTCCCCCGTCCAAGCATATCTTCCCCTTCTTCCCCCCTCCCCAGTCCCGAA 120
consensus_982#1 GTAGAATAGGT------TCTAGGTACATTTTAAAGCGTTTTTAC-------AATCTAAAG 101
* * * ** * * * ** ** ** * * ** *
consensus_982#0 AAAAAAGTAATTGTCTCGCNGNTTCAGATTTCTTCTGTGCGATTCTAATCTTGATATAAC 180
consensus_982#1 AGATCGTTTACGGAGAGAAAGAATGCGAGTCTCTCCGCG-------GATCTTCGAAAATC 154
* * * * * * * ** * ** * * ***** * * *
consensus_982#0 ACTTGAAGTCAATTACACGATTAATTAATCCAAAGGTGTATACATTATAACTATATATTT 240
consensus_982#1 ATCGCGATATGTCATCACACTCTATTCTCATTGGACTTTCTTCTTTGTTACT-------- 206
* * *** * *** * * * * ** * ***
consensus_982#0 GATTCTAATAGAGAGAGATATACGCTCGTATGTTTTTCCTTGCGAATTTTTCGATAATAT 300
consensus_982#1 --TTCGAGTAGCAAAATAACGGCGTTCTCTAGTTTTTTTTTGA----TCTCTGTTACTTT 260
*** * *** * * * ** ** ****** *** * * * ** * *
consensus_982#0 AAATATAATAATAATAACGAGACACAAATAAGTTGAATTGAATAATATTCTAATAGTTAC 360
consensus_982#1 TTTTCTCCTCCCCCCCTTTTTTCTTTA------TAAGTCGACTGATCTTCGA--AGATCT 312
* * * * * * * * ** * ** *** * ** *
consensus_982#0 TATACGGAGTGTGTTGAGTCATTGTCCGCGTCATCCGCGTTTCGATGTTAAAGAAGTGGC 420
consensus_982#1 TACGCGCGATAAGAGAAGATCCAACCAACGACATCGACATCGACAGACAAGAGAGAGAGA 372
** ** * * ** * ** **** * * * * *** *
consensus_982#0 ATGAGTTTCGGTGCAACATCCAAGCGAAATCATATTCGCGATCGAGAATTAGAGAAGGAA 480
consensus_982#1 GAGAGA---GAGACAGTTTGCATGCACGTTGAGACACGAAAGAGAGAGACAGAGA-GAAG 428
*** * ** * ** ** * * * ** * **** ***** * *
consensus_982#0 AGCGATCAATTGGGCGACAAAGAAATGAAACCCCGACAATTCCAGAAACAGATTGAAAC- 539
consensus_982#1 ACAGACAGAGAGAAAGATAGAGAAA-GAGACAGAGATATATATATAAAAAGAAAGAGAGA 487
* ** * * ** * ***** ** ** ** * * * *** *** ** *
consensus_982#0 TTGCAACACAGGAACACAACAGTGTATAGCGTTAAAAACAATAGACTGTTTCCCCATTTC 599
consensus_982#1 TTATGTCAAGTAGATTCAGATGCGAAGCACGTC-----CACTTCGCT--TTCTTNNTCTT 540
** ** * ** * * * *** ** * ** *** * *
consensus_982#0 CTTGCGCTCTCTTTAACTATTTTCTCTGTCTGTNCTCCTCTCTGTTTCGATCTCTCTCTC 659
consensus_982#1 CTTCCATTTCTTTTTA--ATCGCCTCGTTCGATAGAAATTTATATA-------------- 584
*** * * *** * ** *** ** * * * * *
consensus_982#0 TCT 662
consensus_982#1 ---
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |